BAC Information

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BAC

Clone NameB6Ng01-105L01
Chromosome19 (Build37)
Map Location 22,739,089 - 22,906,101
singlet/doubletdoublet
Overlap geneTrpm3
Upstream gene5730446C15Rik, Tmem2, EG433229, EG433230
Downstream geneKlf9, Smc5, Mamdc2, 1700028P14Rik, LOC670565, LOC226030, EG625193, Ptar1, Apba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105L01.bB6Ng01-105L01.g
ACCDH913642DH913643
length1,132967
definitionDH913642|Mus musculus domesticus DNA, BAC clone: B6Ng01-105L01, 5' end.DH913643|Mus musculus domesticus DNA, BAC clone: B6Ng01-105L01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,739,089 - 22,740,229)(22,905,145 - 22,906,101)
sequence
gaattctcagtttcattctagcttctagcttgccgtccaacaaccacatt
gaaaacattcatttttgcttgctcatgtaacagtctacagtttcctgttg
taaacatatgcacactgcatttggtcataggagaaaacctttgtttagtt
aggtacctctctgactggctcttagcgatgcaatgagatgggttatggca
ccttctcatcctgcctatgctatctactctcaactaaaaatatcccaaat
aatatcctcagcttccaaacagaattccccaattcctggatattgctaac
tcaattcaccctcctggacaggactgattcctttctgtgggtaaaacctc
aagcttattataagtcctgacattttccagtggaatccatttgtgctttc
ctcttcatatttttcagcttctttgaaagcactgagaggcttaggatact
ttgcataagacccctttcagtgtgctaggctttctacaggaggaaagaga
aaggaccctttgatgtaaaccttttttgatgtaatcctctaatattaatc
ttattcactcagtgtcaatctttaattactattagtcctttaatctgccc
acgtgtgggatttgggagaaggtatttttccttcaaagaaatgtgatttt
ccaggagttactgttttctgtttctcatagtacagggtatgacctttcct
gatctgcaaggtgtgcgctcaaccacaaagtaatcaagatgctactaaaa
atatatgtgatattccatatgtttttgggttaccactggaacagttttat
attcagattatactggattttttgtctcaattgcaatagcatcatgattt
atatttctatgatatttctcattaataaaaatatttactctattatcact
aatagtattcatttgcttaaaaactaacaaaagccctttgaagcagagag
gactgtatttctacggttgagaaactttagctcatggtatttgaatgaat
tgacagatttcttcagacgatgctaattctctaactaaagttctgcagtg
tccaagttcaccaaacatactctcacatggttatgttgtcctttcgaatt
agggaacctgagaatatttgtgagccaaatgc
gaattctaacttgagtaggatttgccttagaggtctttctggagaaggct
gagttttgattggacaatgtaggctgaattagagtttcagtgggagaatt
ttgtaggtggggagaagctggaaggagaacgtgtgagtgaaaaataagag
aaaaatgaattctgaaatcttatgtatgaaagttcatctgactggggcta
tgggtggaggaaagaccatttgtaacgtaagactggaaaggaaggttgcg
gacaagcagtagataatcttcgctgtcacagcatttgggcacactatgca
caatgttctctgtccgtctgtctgtctgtctgtctcatacaaaccacaca
gacacagacacacagacacacacacagacacacacacagacacacacaga
cacacacagacacacacagacacacatacagacacacacacacacacaca
cacacacacacacacacacacacacacacctctattaatccacacatcaa
tttttaggcttggagagtaagtaagataattgcccaagataatttacgtg
atgaaagacagacagagtcaagatctggtttccaatgcacctaactcaga
ctaagattatttgctaaagccaaacagagtcagaggaaatggaagtcttg
agtgggggactgtaggcaggacctggattttagaatgccgtaacaaatgg
ctatcgtagagcaatgcgtacttacataagagtgaagaaacctctggtca
gttctctggaatcacagggtggcttttataggcatccactggtccatgct
ggctaaaggagattagcccatgtgtacacatagacatcagcgttttctga
gagaccattgggctcatgtttacccatgcctcatatgctaaatgctggtt
ccagatgatgccatgctgttgatttactgtggtttcttgcccaagagaaa
cctgcaaagacttacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_22739089_22740229
seq2: B6Ng01-105L01.b_44_1175

seq1  GAATTCTCAGTTTCATTCTAGCTTCTAGCTTGCCGTCCAACAACCACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTTTCATTCTAGCTTCTAGCTTGCCGTCCAACAACCACATT  50

seq1  GAAAACATTCATTTTTGCTTGCTCATGTAACAGTCTACAGTTTCCTGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACATTCATTTTTGCTTGCTCATGTAACAGTCTACAGTTTCCTGTTG  100

seq1  TAAACATATGCACACTGCATTTGGTCATAGGAGAAAACCTTTGTTTAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATATGCACACTGCATTTGGTCATAGGAGAAAACCTTTGTTTAGTT  150

seq1  AGGTACCTCTCTGACTGGCTCTTAGCGATGCAATGAGATGGGTTATGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACCTCTCTGACTGGCTCTTAGCGATGCAATGAGATGGGTTATGGCA  200

seq1  CCTTCTCATCCTGCCTATGCTATCTACTCTCAACTAAAAATATCCCAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCATCCTGCCTATGCTATCTACTCTCAACTAAAAATATCCCAAAT  250

seq1  AATATCCTCAGCTTCCAAACAGAATTCCCCAATTCCTGGATATTGCTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCTCAGCTTCCAAACAGAATTCCCCAATTCCTGGATATTGCTAAC  300

seq1  TCAATTCACCCTCCTGGACAGGACTGATTCCTTTCTGTGGGTAAAACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCACCCTCCTGGACAGGACTGATTCCTTTCTGTGGGTAAAACCTC  350

seq1  AAGCTTATTATAAGTCCTGACATTTTCCAGTGGAATCCATTTGTGCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTATTATAAGTCCTGACATTTTCCAGTGGAATCCATTTGTGCTTTC  400

seq1  CTCTTCATATTTTTCAGCTTCTTTGAAAGCACTGAGAGGCTTAGGATACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCATATTTTTCAGCTTCTTTGAAAGCACTGAGAGGCTTAGGATACT  450

seq1  TTGCATAAGACCCCTTTCAGTGTGCTAGGCTTTCTACAGGAGGAAAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATAAGACCCCTTTCAGTGTGCTAGGCTTTCTACAGGAGGAAAGAGA  500

seq1  AAGGACCCTTTGATGTAAACCTTTTTTGATGTAATCCTCTAATATTAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCCTTTGATGTAAACCTTTTTTGATGTAATCCTCTAATATTAATC  550

seq1  TTATTCACTCAGTGTCAATCTTTAATTACTATTAGTCCTTTAATCTGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCACTCAGTGTCAATCTTTAATTACTATTAGTCCTTTAATCTGCCC  600

seq1  ACGTGTGGGATTTGGGAGAAGGTATTTTTCCTTCAAAGAAATGTGATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTGGGATTTGGGAGAAGGTATTTTTCCTTCAAAGAAATGTGATTTT  650

seq1  CCAGGAGTTACTGTTTTCTGTTTCTCATAGTACAGGGTATGACCTTTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGTTACTGTTTTCTGTTTCTCATAGTACAGGGTATGACCTTTCCT  700

seq1  GATCTGCAAGGTGTGCGCTCAACCACAAAGTAATCAAGATGCTACTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCAAGGTGTGCGCTCAACCACAAAGTAATCAAGATGCTACTAAAA  750

seq1  ATATATGTGATATTCCATATGTTTTTGGGTTACCACTGGAACAGTTTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGTGATATTCCATATGTTTTTGGGTTACCACTGGAACAGTTTTAT  800

seq1  ATTCAGATTATACTGGATTTTTTGTCTCAATTGCAATAGCATCATGATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGATTATACTGGATTTTTTGTCTCAATTGCAATAGCATCATGATTT  850

seq1  ATATTTCTATGATATTTCTCATTAATAAAAATATTTACTCTATTATCACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTATGATATTTCTCATTAATAAAAATATTTACTCTATTATCACT  900

seq1  AATAGTATTCATTTGCTTAAAAACTAACAAAAGCCCTTTGAAGCAGAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTATTCATTTGCTTAAAAACTAACAAAAGCCCTTTGAAGCAGAGAG  950

seq1  GACTGTATTTCTACGGTTGAGAAAACTTTAGCTCATGGTATTTGAATGAA  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GACTGTATTTCTACGGTTGAG-AAACTTTAGCTCATGGTATTTGAATGAA  999

seq1  TTGACAAGATTTCTCATGACGATGCTAATTCTCTAACCAAAGGTTCTGGC  1050
      ||||| ||||||||   |||||||||||||||||||| ||| ||||| ||
seq2  TTGAC-AGATTTCTTCAGACGATGCTAATTCTCTAACTAAA-GTTCT-GC  1046

seq1  AGTGTCCACAGTTCACCAAACAAACTCCCCAACATGGTTATGTTGTCC-T  1099
      |||||||| ||||||||||||| |||| |  ||||||||||||||||| |
seq2  AGTGTCCA-AGTTCACCAAACATACTCTC--ACATGGTTATGTTGTCCTT  1093

seq1  TCGAATTAGGGAACCTGGAGGAATAATTTTGTGAG-CAAATGC  1141
      |||||||||||||||||   |||||  |||||||| |||||||
seq2  TCGAATTAGGGAACCTG--AGAATA--TTTGTGAGCCAAATGC  1132

seq1: chr19_22905145_22906101
seq2: B6Ng01-105L01.g_69_1035 (reverse)

seq1  GTGTAAGTCTTTGCAGG-TTCTCTGTGGGCAAGAGAACCACAGTAAAATC  49
      ||||||||||||||||| |||||| ||||||||| ||||||||||||   
seq2  GTGTAAGTCTTTGCAGGTTTCTCT-TGGGCAAGA-AACCACAGTAAATCA  48

seq1  ACAGCATGGCATCATCTGGAA-CAGCATTTAGCATATGAGGCAT-GGTTA  97
      ||||||||||||||||||||| |||||||||||||||||||||| ||| |
seq2  ACAGCATGGCATCATCTGGAACCAGCATTTAGCATATGAGGCATGGGTAA  98

seq1  ACATG-GCCC-ATGGTCTCTCAG-AAACGCTG-TGTCTATGTGTACACAT  143
      ||||| |||| |||||||||||| |||||||| |||||||||||||||||
seq2  ACATGAGCCCAATGGTCTCTCAGAAAACGCTGATGTCTATGTGTACACAT  148

seq1  GGGCTTATCTCCTTTAGCCAGCATGGACCAGTGGATGCCTAT-AAAGCCA  192
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  GGGCTAATCTCCTTTAGCCAGCATGGACCAGTGGATGCCTATAAAAGCCA  198

seq1  CCCTGTGGTTCCAGAGAACTGACCAGAGG-TTCTTC-CTCTTATGTAAGT  240
      ||||||| ||||||||||||||||||||| |||||| |||||||||||||
seq2  CCCTGTGATTCCAGAGAACTGACCAGAGGTTTCTTCACTCTTATGTAAGT  248

seq1  ACGCATTGCTCTACGATAGCCATTTGTTACGGCATTCT-AAATCCAGGTC  289
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACGCATTGCTCTACGATAGCCATTTGTTACGGCATTCTAAAATCCAGGTC  298

seq1  CTGCCTACAGT-CCCCACTCAAGACTTCCATTTCCTCTGACTCTGTTTGG  338
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTACAGTCCCCCACTCAAGACTTCCATTTCCTCTGACTCTGTTTGG  348

seq1  CTTTAGCAAATAATCTTAGTCTGAGTTAGGTGCATTGGAAACCAGATCTT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCAAATAATCTTAGTCTGAGTTAGGTGCATTGGAAACCAGATCTT  398

seq1  GACTCTGTCTGTCTTTCATCACGTAAATTATCTTGGGCAATTATCTTACT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGTCTGTCTTTCATCACGTAAATTATCTTGGGCAATTATCTTACT  448

seq1  TACTCTCCAAGCCTAAAAATTGATGTGTGGATTAATAGAGGTGTGTGTGT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCCAAGCCTAAAAATTGATGTGTGGATTAATAGAGGTGTGTGTGT  498

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTATGTGTGT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTATGTGTGT  548

seq1  CTGTGTGTGTCTGTGTGTGTCTGTGTGTGTCTGTGTGTGTGTCTGTGTGT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTGTCTGTGTGTGTCTGTGTGTGTCTGTGTGTGTGTCTGTGTGT  598

seq1  GTGTCTGTGTGTCTGTGTCTGTGTGGTTTGTATGAGACAGACAGACAGAC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGTGTGTCTGTGTCTGTGTGGTTTGTATGAGACAGACAGACAGAC  648

seq1  AGACGGACAGAGAACATTGTGCATAGTGTGCCCAAATGCTGTGACAGCGA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGACAGAGAACATTGTGCATAGTGTGCCCAAATGCTGTGACAGCGA  698

seq1  AGATTATCTACTGCTTGTCCGCAACCTTCCTTTCCAGTCTTACGTTACAA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATCTACTGCTTGTCCGCAACCTTCCTTTCCAGTCTTACGTTACAA  748

seq1  ATGGTCTTTCCTCCACCCATAGCCCCAGTCAGATGAACTTTCATACATAA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTTTCCTCCACCCATAGCCCCAGTCAGATGAACTTTCATACATAA  798

seq1  GATTTCAGAATTCATTTTTCTCTTATTTTTCACTCACACGTTCTCCTTCC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCAGAATTCATTTTTCTCTTATTTTTCACTCACACGTTCTCCTTCC  848

seq1  AGCTTCTCCCCACCTACAAAATTCTCCCACTGAAACTCTAATTCAGCCTA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTCCCCACCTACAAAATTCTCCCACTGAAACTCTAATTCAGCCTA  898

seq1  CATTGTCCAATCAAAACTCAGCCTTCTCCAGAAAGACCTCTAAGGCAAAT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCCAATCAAAACTCAGCCTTCTCCAGAAAGACCTCTAAGGCAAAT  948

seq1  CCTACTCTAGTTAGAATTC  957
      ||||||| |||||||||||
seq2  CCTACTCAAGTTAGAATTC  967