BAC Information

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BAC

Clone NameB6Ng01-108K23
Chromosome19 (Build37)
Map Location 50,971,269 - 51,129,549
singlet/doubletdoublet
Overlap genenone
Upstream geneEG433251, Sorcs1
Downstream geneLOC100042924, LOC100042928, LOC668536, LOC100042936
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108K23.bB6Ng01-108K23.g
ACCDH915806DH915807
length3161,107
definitionDH915806|Mus musculus domesticus DNA, BAC clone: B6Ng01-108K23, 5' end.DH915807|Mus musculus domesticus DNA, BAC clone: B6Ng01-108K23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,971,269 - 50,971,584)(51,128,436 - 51,129,549)
sequence
gaattccttacacagcccttctccaattattaccttaaattgaactacca
tgctatgttcatcaaaatgatgttccatatcaagccaggcactctgtaac
atatgaaaaaaaggaattgtgtaaatgaattactgttcagtaaagagtcc
ccaatttatatgcagtgaatggaaaaaataggcaccctataatttggatt
tgtgtgtgtgtgtgtgtttgtgtgtagtatagtggtaatttctcaatggt
caactctttgttccagagcttccaacagagtgtagtaagtgtggtttatc
tgaaaagacatcatga
gaattcctatttcttttttcttttacagtgaacattaatttcatttgctg
ttaaaattacaacaataaattagcttcatatccatatgcacaatcagagc
aaaagctgcaaatatttcataggtctgacttctatgaagctgctgctcca
gctttgtgtaaacaaacaaatgtcccagagcatgaaagcatgaaagtaaa
aatgttcgagaacgcaaagacacatcattgctgtttcccctacactgcct
gtggcttctcagtaggataattaaaatggggaaaaaccaaaagtcaaaat
agaattatatttaattagtgacagttgtagttgagtgcattaaccctaac
ctctgagcatgattaggggatagactggctcatgttgtagcctgtgtgag
gcagagtctttgtcccattgcttatcttgtgttcattccctgttcatatt
ttcctcctcaacacacactagcgggggaatagattaggctacagttagat
ctattgcgtgatgtattattttagttatgcctgtaagacactaataaaga
gattcaatattattggcatgagaacgaggaaactattaataaggagaagg
ggttcatcttagtcattagatctgagcatactgggaagaaacagagtctg
tcagaggttgagaaaattgcattacaaagtcattcaatttctacatggat
ttttttatgagtaattagtataaataattctgagtggttctaaaaaccat
ggagactgacaaacataaaagagtagatgatgggaggcagctggatcatt
taatctatttctcaattactgttgacacattgggcacaaaattctgcaag
tcttctgtttctttatggtccattttgcagctgtgcttattgtcacaata
aatacattatcttattaatgaagcattgcataatttttacttcaaaaatt
aactcacatacaacctcagaaactagaaatgaaagtatattccacccaga
aagggattcatagaatagggtacatggattgtagatctagggaattggga
gctggttccactagaaataggactgttacaacttacatatgcctgttttg
acagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_50971269_50971584
seq2: B6Ng01-108K23.b_45_360

seq1  GAATTCCTTACACAGCCCTTCTCCAATTATTACCTTAAATTGAACTACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTACACAGCCCTTCTCCAATTATTACCTTAAATTGAACTACCA  50

seq1  TGCTATGTTCATCAAAATGATGTTCCATATCAAGCCAGGCACTCTGTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGTTCATCAAAATGATGTTCCATATCAAGCCAGGCACTCTGTAAC  100

seq1  ATATGAAAAAAAGGAATTGTGTAAATGAATTACTGTTCAGTAAAGAGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAAAAAAGGAATTGTGTAAATGAATTACTGTTCAGTAAAGAGTCC  150

seq1  CCAATTTATATGCAGTGAATGGAAAAAATAGGCACCCTATAATTTGGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTATATGCAGTGAATGGAAAAAATAGGCACCCTATAATTTGGATT  200

seq1  TGTGTGTGTGTGTGTGTTTGTGTGTAGTATAGTGGTAATTTCTCAATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTTTGTGTGTAGTATAGTGGTAATTTCTCAATGGT  250

seq1  CATCTCTTTGTACCAGAGCTTCCAACAGAGTGTAGTAAGTGTGGTTTATC  300
      || |||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTTTGTTCCAGAGCTTCCAACAGAGTGTAGTAAGTGTGGTTTATC  300

seq1  TGAAGAGACATCATGA  316
      |||| |||||||||||
seq2  TGAAAAGACATCATGA  316

seq1: chr19_51128436_51129549
seq2: B6Ng01-108K23.g_65_1171 (reverse)

seq1  TCTCTGTCAAAAACAGCATATGTAGATGGTAACAGGTCCTA-TTCTGATG  49
      ||||||||||||   |||||||||  | |||||| |||||| ||||  ||
seq2  TCTCTGTCAAAACAGGCATATGTAAGTTGTAACA-GTCCTATTTCTAGTG  49

seq1  TGACCAGCTCCC-ATTTCCTAGAATCTACAATCCATGTACCCTAATTCTA  98
        |||||||||| ||| ||||| |||||||||||||||||||| ||||||
seq2  GAACCAGCTCCCAATTCCCTAG-ATCTACAATCCATGTACCCT-ATTCTA  97

seq1  TGAATCCCTTTCTTGGGTGGAATATACTTTCATTTTCTAGTTTTCTTGAG  148
      |||||||||||| ||||||||||||||||||| ||||||||||   ||||
seq2  TGAATCCCTTTC-TGGGTGGAATATACTTTCA-TTTCTAGTTT--CTGAG  143

seq1  GTTTGTATGTGAGTTAATTTTTTGAAGTAAAAATTATGCAATGCTTCATT  198
      | ||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  G-TTGTATGTGAGTTAA-TTTTTGAAGTAAAAATTATGCAATGCTTCATT  191

seq1  AATAAGATAATGTATTTATTGTGACAATAAGCACAGCTGCAAAATGGACC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGATAATGTATTTATTGTGACAATAAGCACAGCTGCAAAATGGACC  241

seq1  ATAAAGAAACAGAAGACTTGCAGAATTTTGTGCCCAATGTGTCAACAGTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAAACAGAAGACTTGCAGAATTTTGTGCCCAATGTGTCAACAGTA  291

seq1  ATTGAGAAATAGATTAAATGATCCAGCTGCCTCCCATCATCTACTCTTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAAATAGATTAAATGATCCAGCTGCCTCCCATCATCTACTCTTTT  341

seq1  ATGTTTGTCAGTCTCCATGGTTTTTAGAACCACTCAGAATTATTTATACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGTCAGTCTCCATGGTTTTTAGAACCACTCAGAATTATTTATACT  391

seq1  AATTACTCATAAAAAAATCCATGTAGAAATTGAATGACTTTGTAATGCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTCATAAAAAAATCCATGTAGAAATTGAATGACTTTGTAATGCAA  441

seq1  TTTTCTCAACCTCTGACAGACTCTGTTTCTTCCCAGTATGCTCAGATCTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAACCTCTGACAGACTCTGTTTCTTCCCAGTATGCTCAGATCTA  491

seq1  ATGACTAAGATGAACCCCTTCTCCTTATTAATAGTTTCCTCGTTCTCATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTAAGATGAACCCCTTCTCCTTATTAATAGTTTCCTCGTTCTCATG  541

seq1  CCAATAATATTGAATCTCTTTATTAGTGTCTTACAGGCATAACTAAAATA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAATATTGAATCTCTTTATTAGTGTCTTACAGGCATAACTAAAATA  591

seq1  ATACATCACGCAATAGATCTAACTGTAGCCTAATCTATTCCCCCGCTAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCACGCAATAGATCTAACTGTAGCCTAATCTATTCCCCCGCTAGT  641

seq1  GTGTGTTGAGGAGGAAAATATGAACAGGGAATGAACACAAGATAAGCAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTGAGGAGGAAAATATGAACAGGGAATGAACACAAGATAAGCAAT  691

seq1  GGGACAAAGACTCTGCCTCACACAGGCTACAACATGAGCCAGTCTATCCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAAAGACTCTGCCTCACACAGGCTACAACATGAGCCAGTCTATCCC  741

seq1  CTAATCATGCTCAGAGGTTAGGGTTAATGCACTCAACTACAACTGTCACT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCATGCTCAGAGGTTAGGGTTAATGCACTCAACTACAACTGTCACT  791

seq1  AATTAAATATAATTCTATTTTGACTTTTGGTTTTTCCCCATTTTAATTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATATAATTCTATTTTGACTTTTGGTTTTTCCCCATTTTAATTAT  841

seq1  CCTACTGAGAAGCCACAGGCAGTGTAGGGGAAACAGCAATGATGTGTCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTGAGAAGCCACAGGCAGTGTAGGGGAAACAGCAATGATGTGTCTT  891

seq1  TGCGTTCTCGAACATTTTTACTTTCATGCTTTCATGCTCTGGGACATTTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTTCTCGAACATTTTTACTTTCATGCTTTCATGCTCTGGGACATTTG  941

seq1  TTTGTTTACACAAAGCTGGAGCAGCAGCTTCATAGAAGTCAGACCTATGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTACACAAAGCTGGAGCAGCAGCTTCATAGAAGTCAGACCTATGA  991

seq1  AATATTTGCAGCTTTTGCTCTGATTGTGCATATGGATATGAAGCTAATTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGCAGCTTTTGCTCTGATTGTGCATATGGATATGAAGCTAATTT  1041

seq1  ATTGTTGTAATTTTAACAGCAAATGAAATTAATGTTCACTGTAAAAGAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGTAATTTTAACAGCAAATGAAATTAATGTTCACTGTAAAAGAAA  1091

seq1  AAAGAAATAGGAATTC  1114
      ||||||||||||||||
seq2  AAAGAAATAGGAATTC  1107