BAC Information

Click to search

BAC

Clone NameB6Ng01-110H19
Chromosome19 (Build37)
Map Location 12,683,251 - 12,684,283
singlet/doubletsinglet
Overlap geneEG240549
Upstream geneMs4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik
Downstream geneGlyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110H19.bB6Ng01-110H19.g
ACCDH917097DH917098
length6461,028
definitionDH917097|Mus musculus domesticus DNA, BAC clone: B6Ng01-110H19, 5' end.DH917098|Mus musculus domesticus DNA, BAC clone: B6Ng01-110H19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacgttttcatctgaaggctactagcagaatactggcttctagg
tagttaggatgagggtcaaaaaacacacaccaaaaatgatacacctactc
caacaaggccacacccacttcatgagggccacatcttctaataatgccac
tcctgagctgagcatatacaaactgtctaaaagaaatgtctaaaagaaat
gtctaaaagaaatgtctaaaagatccatcccatgcacaggcaccaaaccc
tgacactattactatgcttgcaggagcctaacatggttgtccaatgagag
gctctgctagcagctgcctgagacagatgcatatacttacaggcaacatt
tcaatgaggtcaggaaaccctatagaagagttagggggaaaattgaagga
gcggaaggggatgacaaccccataagaaaaacaatagtattaactaacca
ggacccctcagagctcccagagactaagccaccaaccaaagagaatacat
aggctggtccctggcccatgatacatatgtagcagagttcttccttgtct
ggcctcagagtgagaggatgcacctaatcatgtagagacttgatgctcca
ggaacagggaatgctgtggggatgaggtaggggtgagtagatgggt
gaattcagctcatcatttttgaagcaaagaatgaggtttttggagggtct
gtatttatctctgtcctagatgaacgtggagagcacatggagacccactt
gactcaggaaaggatgctccttgtattgtgttgtttaccaaatacaaatt
gggctatgaggatttctcttcctttctttctttttttcttccttccttcc
ttccttccttccttgcttgcttgcttgcttgctttatttttgacagaaat
agataagaagttactttaaacatacagatgatatgacttaaagagactag
aaacatgagcaattatgaatttgcttattaagacaaagttgtataaagta
ctagcaaagatggcaccatgatcaccctatctccccatctcttagatttg
tctcctttaaatttcaaaataacttgcaggtgtgtgttgtggggagggaa
gactgtgtatgatcgtttcatgattaatctgtgtaacttttgttgggttc
ctctcctcagaggtttgaggccatggggactaaagacgtaacccttttta
tttttttttatattctattttttatttcttttacttattccctttacaat
ctgctcaccatcctctcctggtcacccaatcccacaatctttccctcatc
cccctctcctcttctcctctgaggagaggggtgctccaaggtatctctcc
accctgatacatcaagtctttgagggctaggcacaccctcttctactgag
ggcagacaagcagccccctcccccaaagaaaatatcccacagacaggcaa
cagatttattttttttaaaaagatgtatttatttaacatatgtgaataca
ccgaatctgtctcaggacacaccagaagcaggcatcagatcccattacag
atggtgtagccatcatgtggttgctgggaattgaactaggactctgggag
ggcagtcagtgctcttgacttgttgagcattcttcagctcatgcaacaag
cttttgaggaagctaccactcgattgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12683251_12684283
seq2: B6Ng01-110H19.g_69_1096

seq1  GAATTCAGCTCATCATTTTTGAAGCAAAGAATGAGGTTTTTGGAGGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTCATCATTTTTGAAGCAAAGAATGAGGTTTTTGGAGGGTCT  50

seq1  GTATTTATCTCTGTCCTAGATGAACGTGGAGAGCACATGGAGACCCACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTATCTCTGTCCTAGATGAACGTGGAGAGCACATGGAGACCCACTT  100

seq1  GACTCAGGAAAGGATGCTCCTTGTATTGTGTTGTTTACCAAATACAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGGAAAGGATGCTCCTTGTATTGTGTTGTTTACCAAATACAAATT  150

seq1  GGGCTATGAGGATTTCTCTTCCTTTCTTTCTTTTTTTCTTCCTTCCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTATGAGGATTTCTCTTCCTTTCTTTCTTTTTTTCTTCCTTCCTTCC  200

seq1  TTCCTTCCTTCCTTGCTTGCTTGCTTGCTTGCTTTATTTTTGACAGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTCCTTGCTTGCTTGCTTGCTTGCTTTATTTTTGACAGAAAT  250

seq1  AGATAAGAAGTTACTTTAAACATACAGATGATATGACTTAAAGAGACTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGAAGTTACTTTAAACATACAGATGATATGACTTAAAGAGACTAG  300

seq1  AAACATGAGCAATTATGAATTTGCTTATTAAGACAAAGTTGTATAAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGAGCAATTATGAATTTGCTTATTAAGACAAAGTTGTATAAAGTA  350

seq1  CTAGCAAAGATGGCACCATGATCACCCTATCTCCCCATCTCTTAGATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAAGATGGCACCATGATCACCCTATCTCCCCATCTCTTAGATTTG  400

seq1  TCTCCTTTAAATTTCAAAATAACTTGCAGGTGTGTGTTGTGGGGAGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTAAATTTCAAAATAACTTGCAGGTGTGTGTTGTGGGGAGGGAA  450

seq1  GACTGTGTATGATCGTTTCATGATTAATCTGTGTAACTTTTGTTGGGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGTATGATCGTTTCATGATTAATCTGTGTAACTTTTGTTGGGTTC  500

seq1  CTCTCCTCAGAGGTTTGAGGCCATGGGGACTAAAGACGTAACCCTTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCAGAGGTTTGAGGCCATGGGGACTAAAGACGTAACCCTTTTTA  550

seq1  TTTTTTTTTATATTCTATTTTTTATTTCTTTTACTTATTCCCTTTACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTATATTCTATTTTTTATTTCTTTTACTTATTCCCTTTACAAT  600

seq1  CTGCTCACCATCCTCTCCTGGTCACCCAATCCCACAATCTTTCCCTCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCACCATCCTCTCCTGGTCACCCAATCCCACAATCTTTCCCTCATC  650

seq1  CCCCTCTCCTCTTCTCCTCTGAGGAGAGGGGTGCTCCAAGGTATCTCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTCCTCTTCTCCTCTGAGGAGAGGGGTGCTCCAAGGTATCTCTCC  700

seq1  ACCCTGATACATCAAGTCTTTGA-GGCTAGGCACACCCTCTTCTACTGAG  749
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACCCTGATACATCAAGTCTTTGAGGGCTAGGCACACCCTCTTCTACTGAG  750

seq1  GGCAGACAAGCAGCCCCCTCCCCCAAAGAAAATATCCCACAGACAGGCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACAAGCAGCCCCCTCCCCCAAAGAAAATATCCCACAGACAGGCAA  800

seq1  CAGATTTATTTTTTTTAAAAAAGATGTATTTATTTAACATATGTGAATAC  849
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAGATTTATTTTTTTT-AAAAAGATGTATTTATTTAACATATGTGAATAC  849

seq1  ACCGAATCTGTCTTCAGACACACCAGAAGCAGGCATCAGATCCCATTACA  899
      |||||||||||||   ||||||||||||||||||||||||||||||||||
seq2  ACCGAATCTGTCTCAGGACACACCAGAAGCAGGCATCAGATCCCATTACA  899

seq1  GATGGTTGTAAGCCATCATGTGGTTGCTGGGAATTGAACTTAGGACCTCT  949
      ||||| ||| ||||||||||||||||||||||||||||| ||||| ||||
seq2  GATGG-TGT-AGCCATCATGTGGTTGCTGGGAATTGAAC-TAGGA-CTCT  945

seq1  GGAAGAGCAGTCAGTGCTCTTGAC-TGTTGAGCCATCTCTCCAGCTCATG  998
      || || |||||||||||||||||| ||||||| ||| ||| |||||||||
seq2  GGGAGGGCAGTCAGTGCTCTTGACTTGTTGAG-CAT-TCTTCAGCTCATG  993

seq1  CAAC-AGCTTTTGAGATAGCTACCACTCCAATTGTT  1033
      |||| ||||||||||  |||||||||| | ||||||
seq2  CAACAAGCTTTTGAGGAAGCTACCACT-CGATTGTT  1028