BAC Information

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BAC

Clone NameB6Ng01-110I10
Chromosome19 (Build37)
Map Location 15,487,791 - 15,612,096
singlet/doubletdoublet
Overlap genenone
Upstream geneTle4, EG433225, EG635497, Pomc-ps1
Downstream geneLOC667482, Psat1, LOC100041424, Cep78, LOC100042048, Gnaq, E030024N20Rik, LOC624438, Gna14, LOC666665
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110I10.bB6Ng01-110I10.g
ACCDH917121DH917122
length7031,024
definitionDH917121|Mus musculus domesticus DNA, BAC clone: B6Ng01-110I10, 5' end.DH917122|Mus musculus domesticus DNA, BAC clone: B6Ng01-110I10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,611,394 - 15,612,096)(15,487,791 - 15,488,694)
sequence
gaattcatttgcacagcagatcatgtgtcttataacctttggtgacacat
gaccaaagtaagaatgtgtcatcatgcacctcttctcagatgtctattaa
actttttcttgctttgttccaaccgtagaattacatctaatctcatgaaa
gcataattgttgcatcatgttcatttgtttggagaacctgtataaagata
ttggtttgcacataaaacttgctgtttaaatatttattttcttctatgct
aatatttccagtctaacattgtccaattccaggataaagttgaactatgt
gctatgtgtcttgcttcctttattgcttgtcttttcttctatgtgaacac
attttacatcataagaactgatcttcttgtttgacttttatttgatcctg
aaaaagaattgactgctttgttttgtgtgaggtttggtttctagaaatgt
tgacttggtctaaattcaggctccagtgaaaatatcttataaaagtttta
gctaaaaaacaaaacaaaacaaaaaaaaaaaaaaacaaaaaaaaaaaaaa
accaaacctctgtaaacagaaaatctataacatacctttttttggttaag
gttttgggaaaagtatgcaggttaatacccaaatcaaccacgcttcttgt
catttaactaatagtaatatactttatatatatgtgtgtgtgtgtgtgtg
tgt
gaattcttttcaaggaaacatttctttgcttaatggtgtctcataaatcc
catgggctttcttcattttctttttccctttttgaactgtgttaactcaa
attcaaaaccgcttccttctatttttctgctctacagtgtaagctcatgt
ggtattttcatttcactgattgcaattcaactccatgattttaattggtt
cccttttcataatctctgcctttttggtgaacttctcattcattacttgg
attaattttctcttctctttatatttgtttatttgttttctcttacatgt
tgctgaggttgcctgagatcttaattggaaatatttttaatgtttttcat
agatgcccttcaaattgggctatacttagaaataattgtctttttttaaa
aatgtgtcatgtttctcaagtgttcttcatgtactatgtactgggtagaa
cagtcacctcttctacctttgcagaaatagcttttgtaagatatttttag
atgagatttaaagcatcaagtgctttgactttggatgtaggtgagttcaa
aagtatcctctgtttgatttcttccattttgatccacatcagcagtgttt
gagttttgtaatagtctaggctgctacagttcacagaactaactagatga
ctttgcagttaacttgggtttccaaggctgcattccccaggacccacaga
tgaaaggtttgatgacactaggctcatggaacaactgtcagtcttggagg
accatgaagagtctgtccgtgagccatgcataggtgattcacaggattac
taagaaccagctatagtctccagcccatagtacataaatgagaccatcac
cataatcttcatagtaaatgtgggagatgatgtgtgggcctgctgttcca
tcattctggatccacagataaggatgggatttactgagtcctgcaggaca
gcaaagtcatttggcttctgtgacactgtcagcacggtctggagtacagg
gttgttaaggggaatcttgcccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_15611394_15612096
seq2: B6Ng01-110I10.b_44_746 (reverse)

seq1  ACACACACACACACACACACATATATATAAAGTATATTACTATTAGTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACATATATATAAAGTATATTACTATTAGTTAA  50

seq1  ATGACAAGAAGCGTGGTTGATTTGGGTATTAACCTGCATACTTTTCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAAGAAGCGTGGTTGATTTGGGTATTAACCTGCATACTTTTCCCAA  100

seq1  AACCTTAACCAAAAAAAGGTATGTTATAGATTTTCTGTTTACAGAGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTAACCAAAAAAAGGTATGTTATAGATTTTCTGTTTACAGAGGTTT  150

seq1  GGTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTGTTTTGTTTTGTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTGTTTTGTTTTGTTTTTT  200

seq1  AGCTAAAACTTTTATAAGATATTTTCACTGGAGCCTGAATTTAGACCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAAACTTTTATAAGATATTTTCACTGGAGCCTGAATTTAGACCAAG  250

seq1  TCAACATTTCTAGAAACCAAACCTCACACAAAACAAAGCAGTCAATTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATTTCTAGAAACCAAACCTCACACAAAACAAAGCAGTCAATTCTT  300

seq1  TTTCAGGATCAAATAAAAGTCAAACAAGAAGATCAGTTCTTATGATGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGATCAAATAAAAGTCAAACAAGAAGATCAGTTCTTATGATGTAA  350

seq1  AATGTGTTCACATAGAAGAAAAGACAAGCAATAAAGGAAGCAAGACACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTCACATAGAAGAAAAGACAAGCAATAAAGGAAGCAAGACACAT  400

seq1  AGCACATAGTTCAACTTTATCCTGGAATTGGACAATGTTAGACTGGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATAGTTCAACTTTATCCTGGAATTGGACAATGTTAGACTGGAAAT  450

seq1  ATTAGCATAGAAGAAAATAAATATTTAAACAGCAAGTTTTATGTGCAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCATAGAAGAAAATAAATATTTAAACAGCAAGTTTTATGTGCAAAC  500

seq1  CAATATCTTTATACAGGTTCTCCAAACAAATGAACATGATGCAACAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCTTTATACAGGTTCTCCAAACAAATGAACATGATGCAACAATTA  550

seq1  TGCTTTCATGAGATTAGATGTAATTCTACGGTTGGAACAAAGCAAGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCATGAGATTAGATGTAATTCTACGGTTGGAACAAAGCAAGAAAA  600

seq1  AGTTTAATAGACATCTGAGAAGAGGTGCATGATGACACATTCTTACTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAATAGACATCTGAGAAGAGGTGCATGATGACACATTCTTACTTTG  650

seq1  GTCATGTGTCACCAAAGGTTATAAGACACATGATCTGCTGTGCAAATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTGTCACCAAAGGTTATAAGACACATGATCTGCTGTGCAAATGAA  700

seq1  TTC  703
      |||
seq2  TTC  703

seq1: chr19_15487791_15488694
seq2: B6Ng01-110I10.g_196_1092

seq1  TGCTCTACAGTGTAAGCTCATGTGGTATTTTCATTTCACTGATTGCAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTACAGTGTAAGCTCATGTGGTATTTTCATTTCACTGATTGCAATT  50

seq1  CAACTCCATGATTTTAATTGGTTCCCTTTTCATAATCTCTGCCTTTTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCATGATTTTAATTGGTTCCCTTTTCATAATCTCTGCCTTTTTGG  100

seq1  TGAACTTCTCATTCATTACTTGGATTAATTTTCTCTTCTCTTTATATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTCTCATTCATTACTTGGATTAATTTTCTCTTCTCTTTATATTTG  150

seq1  TTTATTTGTTTTCTCTTACATGTTGCTGAGGTTGCCTGAGATCTTAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGTTTTCTCTTACATGTTGCTGAGGTTGCCTGAGATCTTAATTG  200

seq1  GAAATATTTTTAATGTTTTTCATAGATGCCCTTCAAATTGGGCTATACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATTTTTAATGTTTTTCATAGATGCCCTTCAAATTGGGCTATACTT  250

seq1  AGAAATAATTGTCTTTTTTTAAAAATGTGTCATGTTTCTCAAGTGTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAATTGTCTTTTTTTAAAAATGTGTCATGTTTCTCAAGTGTTCTT  300

seq1  CATGTACTATGTACTGGGTAGAACAGTCACCTCTTCTACCTTTGCAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACTATGTACTGGGTAGAACAGTCACCTCTTCTACCTTTGCAGAAA  350

seq1  TAGCTTTTGTAAGATATTTTTAGATGAGATTTAAAGCATCAAGTGCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTTGTAAGATATTTTTAGATGAGATTTAAAGCATCAAGTGCTTTG  400

seq1  ACTTTGGATGTAGGTGAGTTCAAAAGTATCCTCTGTTTGATTTCTTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGATGTAGGTGAGTTCAAAAGTATCCTCTGTTTGATTTCTTCCAT  450

seq1  TTTGATCCACATCAGCAGTGTTTGAGTTTTGTAATAGTCTAGGCTGCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCCACATCAGCAGTGTTTGAGTTTTGTAATAGTCTAGGCTGCTAC  500

seq1  AGTTCACAGAACTAACTAGATGACTTTGCAGTTAACTTGGGTTTCCAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACAGAACTAACTAGATGACTTTGCAGTTAACTTGGGTTTCCAAGG  550

seq1  CTGCATTCCCCAGGACCCACAGATGAAAGGTTTGATGACACTAGGCTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTCCCCAGGACCCACAGATGAAAGGTTTGATGACACTAGGCTCAT  600

seq1  GGAACAACTGTCAGTCTTGGAGGACCATGAAGAGTCTGTCCGTGAGCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAACTGTCAGTCTTGGAGGACCATGAAGAGTCTGTCCGTGAGCCAT  650

seq1  GCATAGGTGATTCACAGGATTACTAAGAACCAGCTATAGTCTCCAGCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGGTGATTCACAGGATTACTAAGAACCAGCTATAGTCTCCAGCCCA  700

seq1  TAGTACATAAATGAGACCATCACCATAATCTTCATAGTAAATGTGGGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACATAAATGAGACCATCACCATAATCTTCATAGTAAATGTGGGAGA  750

seq1  TGATGTGTGGGCCTGCTGTTCCATCAATTCTGGATCCACAAGAT-AGGAT  799
      ||||||||||||||||||||||||| ||||||||||||| |||| |||||
seq2  TGATGTGTGGGCCTGCTGTTCCATC-ATTCTGGATCCAC-AGATAAGGAT  798

seq1  GGGATTTTACTGAGGTCCTGCAGGACAAGCAAAGTCAATTTGGCTTCTGT  849
      |||| |||||||| |||||||||||| ||||||||| |||||||||||||
seq2  GGGA-TTTACTGA-GTCCTGCAGGAC-AGCAAAGTC-ATTTGGCTTCTGT  844

seq1  GACACTGTCAGCCACGGACTGGAAGTACAGGG-TGTAGAGGGGAATCTTT  898
      ||||||||||| ||||| |||| ||||||||| |||  ||||||||| ||
seq2  GACACTGTCAG-CACGGTCTGG-AGTACAGGGTTGTTAAGGGGAATC-TT  891

seq1  GCCCAG  904
      ||||||
seq2  GCCCAG  897