BAC Information

Click to search

BAC

Clone NameB6Ng01-110O04
Chromosome19 (Build37)
Map Location 49,054,758 - 49,055,280
singlet/doubletsinglet
Overlap genenone
Upstream geneGm969, LOC670576, Sorcs3, LOC100042896
Downstream geneLOC629448, Siah1-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110O04.bB6Ng01-110O04.g
ACCDH917381DH917382
length1,149935
definitionDH917381|Mus musculus domesticus DNA, BAC clone: B6Ng01-110O04, 5' end.DH917382|Mus musculus domesticus DNA, BAC clone: B6Ng01-110O04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaaactgaggagtaccaaatggctgggaagcacttaaataagtg
ttcaacattcttagtcatcagagaaatgcaaattaaaatgaccctgaaat
ttcacctcacaccagtcagaatgtctaagatcaacaactcagatggcagc
agatgctggtgaggatatggagaaagaggaacattcctccattgctggtg
ggattaccagttggtacaacccctctagaaatcagtccagcaattcctca
gaaaattgaacatagttctacctgaaaacccaaaaataccacccctgggc
ctatacccaaaagatgctccaacaagtaataaggacacatgctccactat
gttcatagcagccttatttataatagacaaaagcttgaaagaacccagat
gtccttcaacacaggaatggatacagaaaatgtggtacaatcacacaatg
gtgtactactcagctgtaaaaaaaaaaaaaacaacttcatgaaattctta
ggcaaatggatggaattagaaaatatcatcctgtgtgcagtaatccagtc
acaaaaaaaaaaaaaaaacacattgtatgcagtcaatgataagtggatat
tagctcaaaagctcagaatattcaagatacaattcacaggctacatgaag
ctcaagaagaagaaagaccaaagtgtgggtgcttccatccttcttagaag
ggggaacaaaatactcaaagggggaaatactgagacaaagtttagagcag
agaatgaaggaaaggccatccagagactgcctcacctgggcactcaatct
atatatagacaccaaatccagacacccttgcaaatgcccaggaagttcat
actgaaaggagcctgatatagttgacccctgagtggctctgcgaaatcct
gataaatatggaggtggatgctcacagacagcattggactgagcacagat
ccataatggaggagttagatataggacagaggagctgagggggtttgcat
cgcttgagacacatattcacacagagtaccaatgagacttatgctcagct
gcatatgtagcgagatgctgtcgaaattcatggaaaggagagagcccttt
gtctgtaaaggcttgatgcctcagtgtagggaggccaggctggtaagcg
gaattcctgatctttccaaaacttttatcgtgaatgggtgttgaatcttg
tcaaatgctttttctgcatctaacaagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaact
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcagttagcaagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtgtcttcataaaaaatgagt
tgggtagagtaccttctacttctattttgtgaaacagtttgtgcagaact
ggaattagatcttctttgaaggtctgatagaactctgcactaaacccgtc
tggtcctgggctttttttggctgggagactattaataactgcttctattt
ctttaggtgatatgggactgtttagatggtcaacttgatcctgactcaac
tttggtacctggtatctgtccagaaatttgtccatttcgtccaggttttc
cagttttgttgaggataaccttttgtagaaggatctgatggtgttttgga
tttcttcaggatctgttgttatgtctcccttttcatttctgattttgtta
attaggattttgtccctgtgccctttagtgagtctagctaagggtttatc
tatcttgttgattttctcaaagaaccaactcctcgtttggttaattcttt
gaatagttcttcttgtttccacttggttgatttcacccctgagtttgatt
atttcctgccgtctactcctcttgggtgaatttgcttcctttttttctag
agctttagacgtgtgtcaagctgctagtatgtgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_49054758_49055280
seq2: B6Ng01-110O04.g_67_591 (reverse)

seq1  CTAAACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCT  50

seq1  CCCAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATC  100

seq1  AGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTATTTCACAAA  150
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTGTTTCACAAA  150

seq1  ATAGAAGTAGAAGGTACTCTACCCAACTCA--TTTTATGAAGCCACTATT  198
      ||||||||||||||||||||||||||||||  |||||||||| |||||||
seq2  ATAGAAGTAGAAGGTACTCTACCCAACTCATTTTTTATGAAGACACTATT  200

seq1  ACTCTGATACCTAAACCACAGAAAGATTCAACAAAGATAGAGAACTTCAG  248
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  ACTCTGATACCTAAACCACAGAAAGACCCAACAAAGATAGAGAACTTCAG  250

seq1  ACCAATTTCTCTTATGAATATTGATGCAAAAATCCTCAATAAAATTCTTG  298
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACCAATTTCTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTTG  300

seq1  CTAACCGAATCCAAGAACATATTAAAGCAATCATCCATCCTGACCAAGTA  348
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTAACTGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTA  350

seq1  GGTTTTATTCCAGGAATGCAGGGATGGTTTAATATACGAAAATCCATCAA  398
      |||||||||||||| |||||||||| ||||||||||||||||||||||||
seq2  GGTTTTATTCCAGGGATGCAGGGATAGTTTAATATACGAAAATCCATCAA  400

seq1  TGTAATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCT  450

seq1  CGTTAGATGCAGAAAAAGCATTTGACAAGATTCAACACCCATTCATGATA  498
       |||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGTTAGATGCAGAAAAAGCATTTGACAAGATTCAACACCCATTCACGATA  500

seq1  AAAGTTTTGGAAAGATCAGGAATTC  523
      |||||||||||||||||||||||||
seq2  AAAGTTTTGGAAAGATCAGGAATTC  525