BAC Information

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BAC

Clone NameB6Ng01-112I22
Chromosome19 (Build37)
Map Location 34,238,971 - 34,373,356
singlet/doubletdoublet
Overlap geneAnkrd22, Stambpl1, Acta2, Fas
Upstream gene6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn
Downstream geneCh25h, Lipa, Ifit2, Ifit3, OTTMUSG00000016644, LOC667370, 2010002M12Rik, Ifit1, Slc16a12, LOC676714, Pank1, Mphosph1, LOC383464
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112I22.bB6Ng01-112I22.g
ACCDH918590DH918591
length523979
definitionDH918590|Mus musculus domesticus DNA, BAC clone: B6Ng01-112I22, 5' end.DH918591|Mus musculus domesticus DNA, BAC clone: B6Ng01-112I22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,238,971 - 34,239,499)(34,372,374 - 34,373,356)
sequence
ttgtcaaaactagttttgtggaccctacatgaggtgagtcagaactctgg
agtgagtgtcctagagaattcactatgaatgattttctctccctgacact
tagaaaatttaccagagtagaatgttaattcacattatatcttttaacat
cctcatatgtacgtgacttcttggtgagatcaaaatcacagagcaagata
ttcccaggacggtgaaataagcagacaatgcctttagtaaaggcactcac
acacttaagtgcacacagtcgcaaattcatgcttgcacatgttcattgga
agcaggcaccaaacaaccacctttcatgctagcagatccaaatcaatgag
gctcccttgagcttagagaatggaatgctgattagcaagttaattatgtc
agacaaggagtaagttatgaataataataatgataataataataatgaga
ggagaagaagaagaagaagaagaagaaggagaaggagaaggagaaggaga
aggagaaggagaaggagaaggag
gaattcactgtacaacaaatgaaaagaggcaacttcgggggctgcaagac
tgtatgaagtctgaagttctgcaaaggtttctggtttgtgttcagggata
agattaggagctttgagataacagtagtaaatctgaaacaggaaccacct
aatgtctcagagatgaaaagagtttgtgtttgagtaagtaccacttggtc
tttcatgaacatttttgggttttttgtttttgttttgttgttttgttttg
ttttgttttgttttgtcatttggttttgatggcagtcctatcagcttgct
gaattaaggatcataaatacaacccctttttagttgttcttctctgcttg
actttgtgtggtcagagctatctatttcccctggtgctctgagtccagct
ctaccatctctggacctaccagatttgcttcatcgtgatggaaagtctgt
cttctttaagcaaactggacaaaaagtacagggtccgtttaaagttatac
gggaaagaactgttgactgaatagaaagctctgtcacattattcactaca
aactttacaaacttgcgactgcagttcatggtgagcggtctttctgatgt
gtctctggacatcatttctacacaatacttgctataaaaatatgctgtgc
cttcttacccatgtcctgacaagtccttccggttatcaatgagacagcaa
aataaagtgacttagttgacactcagtacttctctagaactgggaataaa
gaaatatgtttgcttttacacctggagagaagtgtggattgactgtcttc
tgtgaatcaggtttttgtttgtttctttgtttgtttgagtgtgtgtgtgt
gtgttttaataaataggaggaaaagaccaatctaatgatgcaatgttctt
tagttacctcctgggaaagtattggagagattctttttttgcccccactc
acactttaaaagtttgctttcaatctaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_34238971_34239499
seq2: B6Ng01-112I22.b_44_572

seq1  GAATTCTTGTCAAAACTAGTTTTGTGGACCCTACATGAGGTGAGTCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTCAAAACTAGTTTTGTGGACCCTACATGAGGTGAGTCAGAA  50

seq1  CTCTGGAGTGAGTGTCCTAGAGAATTCACTATGAATGATTTTCTCTCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAGTGAGTGTCCTAGAGAATTCACTATGAATGATTTTCTCTCCCT  100

seq1  GACACTTAGAAAATTTACCAGAGTAGAATGTTAATTCACATTATATCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTAGAAAATTTACCAGAGTAGAATGTTAATTCACATTATATCTTT  150

seq1  TAACATCCTCATATGTACGTGACTTCTTGGTGAGATCAAAATCACAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCCTCATATGTACGTGACTTCTTGGTGAGATCAAAATCACAGAGC  200

seq1  AAGATATTCCCAGGACGGTGAAATAAGCAGACAATGCCTTTAGTAAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTCCCAGGACGGTGAAATAAGCAGACAATGCCTTTAGTAAAGGC  250

seq1  ACTCACACACTTAAGTGCACACAGTCGCAAATTCATGCTTGCACATGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACACACTTAAGTGCACACAGTCGCAAATTCATGCTTGCACATGTTC  300

seq1  ATTGGAAGCAGGCACCAAACAACCACCTTTCATGCTAGCAGATCCAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAGCAGGCACCAAACAACCACCTTTCATGCTAGCAGATCCAAATC  350

seq1  AATGAGGCTCCCTTGAGCTTAGAGAATGGAATGCTGATTAGCAAGTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGCTCCCTTGAGCTTAGAGAATGGAATGCTGATTAGCAAGTTAAT  400

seq1  TATGTCAGACAAGGAGTAAGTTATGAATAATAATAATGATAATAATAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCAGACAAGGAGTAAGTTATGAATAATAATAATGATAATAATAATA  450

seq1  ATGAGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGAAGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGAAGGAGA  500

seq1  AGGAGAAGGAGAAGGAGAAGGAGAAGGAG  529
      |||||||||||||||||||||||||||||
seq2  AGGAGAAGGAGAAGGAGAAGGAGAAGGAG  529

seq1: chr19_34372374_34373356
seq2: B6Ng01-112I22.g_66_1044 (reverse)

seq1  TGTAGATTTGAAAGCAAACTTTCTAAAGTGTGAGTGGGGGCAAAAAAAGA  50
      |||||| ||||||||||||||| |||||||||||||||||||||||||||
seq2  TGTAGA-TTGAAAGCAAACTTT-TAAAGTGTGAGTGGGGGCAAAAAAAGA  48

seq1  ATCTTCTCCAATACTTTCCCAGGAGGTAACT-AAGAACATTGCATCATTA  99
      ||| ||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATC-TCTCCAATACTTTCCCAGGAGGTAACTAAAGAACATTGCATCATTA  97

seq1  GATTTGTCTTTTTCCTCCTATTTATTAAAACACACACACACACACTCAAA  149
      |||| ||| |||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGTC-TTTTCCTCCTATTTATTAAAACACACACACACACACTCAAA  146

seq1  CAAAACAAAGAAACAAACAAAAACCTGATTCACAGAAGACAGTCAATCCA  199
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-AAACAAAGAAACAAACAAAAACCTGATTCACAGAAGACAGTCAATCCA  195

seq1  CACTTCTCTCCAGGTGTAAAAGCAAACATATTTCTTTATTCCCAGTTCTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTCTCCAGGTGTAAAAGCAAACATATTTCTTTATTCCCAGTTCTA  245

seq1  GAGAAGTACTGAGTGTCAACTAAGTCACTTTATTTTGCTGTCTCATTGAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTACTGAGTGTCAACTAAGTCACTTTATTTTGCTGTCTCATTGAT  295

seq1  AACCGGAAGGACTTGTCAGGACATGGGTAAGAAGGCACAGCATATTTTTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGGAAGGACTTGTCAGGACATGGGTAAGAAGGCACAGCATATTTTTA  345

seq1  TAGCAAGTATTGTGTAGAAATGATGTCCAGAGACACATCAGAAAGACCGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGTATTGTGTAGAAATGATGTCCAGAGACACATCAGAAAGACCGC  395

seq1  TCACCATGAACTGCAGTCGCAAGTTTGTAAAGTTTGTAGTGAATAATGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATGAACTGCAGTCGCAAGTTTGTAAAGTTTGTAGTGAATAATGTG  445

seq1  ACAGAGCTTTCTATTCAGTCAACAGTTCTTTCCCGTATAACTTTAAACGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCTTTCTATTCAGTCAACAGTTCTTTCCCGTATAACTTTAAACGG  495

seq1  ACCCTGTACTTTTTGTCCAGTTTGCTTAAAGAAGACAGACTTTCCATCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTACTTTTTGTCCAGTTTGCTTAAAGAAGACAGACTTTCCATCAC  545

seq1  GATGAAGCAAATCTGGTAGGTCCAGAGATGGTAGAGCTGGACTCAGAGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGCAAATCTGGTAGGTCCAGAGATGGTAGAGCTGGACTCAGAGCA  595

seq1  CCAGGGGAAATAGATAGCTCTGACCACACAAAGTCAAGCAGAGAAGAACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGAAATAGATAGCTCTGACCACACAAAGTCAAGCAGAGAAGAACA  645

seq1  ACTAAAAAGGGGTTGTATTTATGATCCTTAATTCAGCAAGCTGATAGGAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAAGGGGTTGTATTTATGATCCTTAATTCAGCAAGCTGATAGGAC  695

seq1  TGCCATCAAAACCAAATGACAAAACAAAACAAAACAAAACAAAACAACAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCAAAACCAAATGACAAAACAAAACAAAACAAAACAAAACAACAA  745

seq1  AACAAAAACAAAAAACCCAAAAATGTTCATGAAAGACCAAGTGGTACTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAACAAAAAACCCAAAAATGTTCATGAAAGACCAAGTGGTACTTA  795

seq1  CTCAAACACAAACTCTTTTCATCTCTGAGACATTAGGTGGTTCCTGTTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACACAAACTCTTTTCATCTCTGAGACATTAGGTGGTTCCTGTTTC  845

seq1  AGATTTACTACTGTTATCTCAAAGCTCCTAATCTTATCCCTGAACACAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTACTACTGTTATCTCAAAGCTCCTAATCTTATCCCTGAACACAAA  895

seq1  CCAGAAACCTTTGCAGAACTTCAGACTTCATACAGTCTTGCAGCCCCCGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAACCTTTGCAGAACTTCAGACTTCATACAGTCTTGCAGCCCCCGA  945

seq1  AGTTGCCTCTTTTCATTTGTTGTACAGTGAATTC  983
      ||||||||||||||||||||||||||||||||||
seq2  AGTTGCCTCTTTTCATTTGTTGTACAGTGAATTC  979