BAC Information

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BAC

Clone NameB6Ng01-115E20
Chromosome19 (Build37)
Map Location 32,942,539 - 33,122,406
singlet/doubletdoublet
Overlap genenone
Upstream gene1810073H04Rik, Asah2, EG668042, Sgms1, 2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik
Downstream gene6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115E20.bB6Ng01-115E20.g
ACCDH920601DH920602
length1,1161,012
definitionDH920601|Mus musculus domesticus DNA, BAC clone: B6Ng01-115E20, 5' end.DH920602|Mus musculus domesticus DNA, BAC clone: B6Ng01-115E20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,942,539 - 32,943,666)(33,121,394 - 33,122,406)
sequence
gaattctgatggtgggagctggtgagatggctcagtgggtaagagcaccc
gactgcttttctgaaggtccggagttcaaatcccagcaaccacatggtgg
ctcacaaccatccttaacgagatctaactctctcttctggagtgtctgaa
aacagctacagtgtacttacatataataaataaatttaaaaaaaaagaat
tctgatggtgatgataggaagtcattcctttctatcagggtctgtataac
tggttgtggacttttctaagtgtcagaaaacatgatggctcaaacattgc
aatacaaacagtatgaatcagttggtatgtataaagtatccaccctctaa
taaattgttttcaaccagtgagttgcgacccccttggggttgaatatcag
ctatcctgcatatcagatatttacatcctgattcataacagtagcaaaaa
attacagctatgaagtagtaatgaaataattttatgattgcgggtcacta
caacatgaggaactgtattaaagggtcaccaggattaggaagggtgagaa
gcattgctctaatataagctgtaagaagctgtctgcttatgtcaactgtt
tctgggttctttatcaacaataagaagatagccactgatttttttttttt
tttttttttttttttagtattttacatagggaacgcatcctggcaactcc
cttaagtaatcaatgaaacctttgccctataggaaggagcaaacctcggg
acacctgctgtgacactcaaggctttcgttgtttctagtggacactgtca
aggttgtttttcagtgtggggtcattcagagatcaggcaaggacgcatca
tcgtagtctagggtctcagaatacttcctggagttcacctgaatcttgtg
tcacctggcaaacaaaagagagaggataatgggggaatcactggagaagc
ttaaagtcaagactctgctcctcccctacgaacagaaatccattttatgg
ctcatctaaatgctggaagtcatcgacagaaatcaattcacggtccacgt
aatgctagaatctaggaagaactttctatacactagagaagaattgattt
ttacctaatttcgtca
gaattcatccctctcctgccagttgaggttctgccctgagactggagaaa
ggggcataaaaggacagagtatgcatgcctctgtgcctccctcttcactg
agacagaaacattgggccttcccagcctttatatcagagttgtctcatgc
atcatttcttcctactctttgcagaggtgtcatttgccccatggcagaaa
cagtgggtgagtagcaggagagaggttggcattaccaaggagaggtaaac
tgagaaatgttttagaaatgcctcttatgtttttattaatattaaaaaat
ttattatgtaacgagacgttttccttatgtcaggcatgaggcatggtaaa
atatgcatcaaatggaactacttacactataaagaatttattgctgccac
aagcataaaaggaacaacccatatatggtttgggttctttttgtccaggt
ggctgaccttgtatcactgggctgctctctgaggaagctttattcctggg
ctaaagtcttgctctctcccaatcccaacataaagctaggagtgctttct
cagcttctggtcatccataggttggaggatgcatggactgctcagagcct
gaaagctgcctgcaataagtgaggatacttcagagctttgtactccccag
taaaatacaggctcagggaaacgttggctggaagcagctcaccagtcagt
tacgccatctctgagcctcagttttctgacctgtaaaggacttggtgatc
atatcaaccagatagtgtgactcagttgcttgggtttccttaacataatg
tcagacttgatgctttaaacagaagcttgtttgctcaccatccaggagcc
gagccaccatgatcaagttccatgcaggatgtctttctggtgatcatgat
ttccttggtttgtagaaagccagggcctcattatacccttcactgacttt
ctctgtgcatctcagagagagagagagagagagagagagagagatagaga
aataagagagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32942539_32943666
seq2: B6Ng01-115E20.b_46_1161

seq1  GAATTCTGATGGTGGGAGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATGGTGGGAGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCC  50

seq1  GACTGCTTTTCTGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCTTTTCTGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGG  100

seq1  CTCACAACCATCCTTAACGAGATCTAACTCTCTCTTCTGGAGTGTCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAACCATCCTTAACGAGATCTAACTCTCTCTTCTGGAGTGTCTGAA  150

seq1  AACAGCTACAGTGTACTTACATATAATAAATAAATTTAAAAAAAAAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTACAGTGTACTTACATATAATAAATAAATTTAAAAAAAAAGAAT  200

seq1  TCTGATGGTGATGATAGGAAGTCATTCCTTTCTATCAGGGTCTGTATAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGGTGATGATAGGAAGTCATTCCTTTCTATCAGGGTCTGTATAAC  250

seq1  TGGTTGTGGACTTTTCTAAGTGTCAGAAAACATGATGGCTCAAACATTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGGACTTTTCTAAGTGTCAGAAAACATGATGGCTCAAACATTGC  300

seq1  AATACAAACAGTATGAATCAGTTGGTATGTATAAAGTATCCACCCTCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAACAGTATGAATCAGTTGGTATGTATAAAGTATCCACCCTCTAA  350

seq1  TAAATTGTTTTCAACCAGTGAGTTGCGACCCCCTTGGGGTTGAATATCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGTTTTCAACCAGTGAGTTGCGACCCCCTTGGGGTTGAATATCAG  400

seq1  CTATCCTGCATATCAGATATTTACATCCTGATTCATAACAGTAGCAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTGCATATCAGATATTTACATCCTGATTCATAACAGTAGCAAAAA  450

seq1  ATTACAGCTATGAAGTAGTAATGAAATAATTTTATGATTGCGGGTCACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGCTATGAAGTAGTAATGAAATAATTTTATGATTGCGGGTCACTA  500

seq1  CAACATGAGGAACTGTATTAAAGGGTCACCAGGATTAGGAAGGGTGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATGAGGAACTGTATTAAAGGGTCACCAGGATTAGGAAGGGTGAGAA  550

seq1  GCATTGCTCTAATATAAGCTGTAAGAAGCTGTCTGCTTATGTCAACTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGCTCTAATATAAGCTGTAAGAAGCTGTCTGCTTATGTCAACTGTT  600

seq1  TCTGGGTTCTTTATCAACAATAAGAAGATAGCCACTGATTTTTTTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTTCTTTATCAACAATAAGAAGATAGCCACTGATTTTTTTTTTTT  650

seq1  TTTTTTTTTTTTTTTAGTATTTTACATAGGGAACGCATCCTGGCAACTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTAGTATTTTACATAGGGAACGCATCCTGGCAACTCC  700

seq1  CTTAAGTAATCAATGAAACCTTTGCCCTATAGGAGGGAGCAAACCTCGGG  750
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTAAGTAATCAATGAAACCTTTGCCCTATAGGAAGGAGCAAACCTCGGG  750

seq1  ACACCTGCTGTGACACTCAAGGCTTTCGTTGTTTCTAGTGGACACTGTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGCTGTGACACTCAAGGCTTTCGTTGTTTCTAGTGGACACTGTCA  800

seq1  AGGTTGTTTTTCAGTGTGGGGTCATTCAGAGATTCAGGCAAGGACGCATC  850
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGGTTGTTTTTCAGTGTGGGGTCATTCAGAGA-TCAGGCAAGGACGCATC  849

seq1  ATCGTAGTCTAGGGTCTCAGAATAC-TCCTGGAGGTCACCTGAATCTTGT  899
      ||||||||||||||||||||||||| |||||||| |||||||||||||||
seq2  ATCGTAGTCTAGGGTCTCAGAATACTTCCTGGAGTTCACCTGAATCTTGT  899

seq1  GTCACCTGGCAAAACAAAAGAGAGAGGAT-ATGGGGGAATCACT-GAGAA  947
      |||||||||| |||||||||||||||||| |||||||||||||| |||||
seq2  GTCACCTGGC-AAACAAAAGAGAGAGGATAATGGGGGAATCACTGGAGAA  948

seq1  GCTTAAGGTCCAAGACTCTGCCCCTCCCCCTACCGACCAGAAATCCATTT  997
      |||||| || ||||||||||| ||| |||||| ||| |||||||||||||
seq2  GCTTAAAGT-CAAGACTCTGCTCCT-CCCCTA-CGAACAGAAATCCATTT  995

seq1  TATGGCTCCATCTAAATGCTGGAAGTCATCGACCAGAAATCAATTCCACG  1047
      ||||||| |||||||||||||||||||||||| |||||||||||| ||||
seq2  TATGGCT-CATCTAAATGCTGGAAGTCATCGA-CAGAAATCAATT-CACG  1042

seq1  GTTCCACGTAAATGCTAGGAATCTAGGAAGGACTTTCTCATACAACTAGG  1097
      | ||||||| ||||||| |||||||||||| ||||||| |||| |||| |
seq2  G-TCCACGT-AATGCTA-GAATCTAGGAAGAACTTTCT-ATAC-ACTA-G  1086

seq1  AGAAGAAATGATTTTTACCTAGTTTCTGTCA  1128
      ||||||| ||||||||||||| |||| ||||
seq2  AGAAGAATTGATTTTTACCTAATTTC-GTCA  1116

seq1: chr19_33121394_33122406
seq2: B6Ng01-115E20.g_68_1078 (reverse)

seq1  TCTCTC-TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTGA  49
      |||||| | | ||||| ||||||||||||||||||||||||||||  |||
seq2  TCTCTCTTATTTCTCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGA  50

seq1  GATTGCACAGAGGAAGGTCCAGTGAAGGGTATAATGAGGCCCTGGCCTTC  99
      || ||||||||| |||   ||||||||||||||||||||||||||| |||
seq2  GA-TGCACAGAGAAAG--TCAGTGAAGGGTATAATGAGGCCCTGGCTTTC  97

seq1  TACAAACCAAGGAAATCATGATCACCAGAAAGACATCCTGCATGGAACTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACCAAGGAAATCATGATCACCAGAAAGACATCCTGCATGGAACTT  147

seq1  GATCATGGTGGCTCGGCTCCTGGATGGTGAGCAAACAAGCTTCTGTTTAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGGTGGCTCGGCTCCTGGATGGTGAGCAAACAAGCTTCTGTTTAA  197

seq1  AGCATCAAGTCTGACATTATGTTAAGGAAACCCAAGCAACTGAGTCACAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAAGTCTGACATTATGTTAAGGAAACCCAAGCAACTGAGTCACAC  247

seq1  TATCTGGTTGATATGATCACCAAGTCCTTTACAGGTCAGAAAACTGAGGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGTTGATATGATCACCAAGTCCTTTACAGGTCAGAAAACTGAGGC  297

seq1  TCAGAGATGGCGTAACTGACTGGTGAGCTGCTTCCAGCCAACGTTTCCCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATGGCGTAACTGACTGGTGAGCTGCTTCCAGCCAACGTTTCCCT  347

seq1  GAGCCTGTATTTTACTGGGGAGTACAAAGCTCTGAAGTATCCTCACTTAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGTATTTTACTGGGGAGTACAAAGCTCTGAAGTATCCTCACTTAT  397

seq1  TGCAGGCAGCTTTCAGGCTCTGAGCAGTCCATGCATCCTCCAACCTATGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCAGCTTTCAGGCTCTGAGCAGTCCATGCATCCTCCAACCTATGG  447

seq1  ATGACCAGAAGCTGAGAAAGCACTCCTAGCTTTATGTTGGGATTGGGAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAGAAGCTGAGAAAGCACTCCTAGCTTTATGTTGGGATTGGGAGA  497

seq1  GAGCAAGACTTTAGCCCAGGAATAAAGCTTCCTCAGAGAGCAGCCCAGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGACTTTAGCCCAGGAATAAAGCTTCCTCAGAGAGCAGCCCAGTG  547

seq1  ATACAAGGTCAGCCACCTGGACAAAAAGAACCCAAACCATATATGGGTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGGTCAGCCACCTGGACAAAAAGAACCCAAACCATATATGGGTTG  597

seq1  TTCCTTTTATGCTTGTGGCAGCAATAAATTCTTTATAGTGTAAGTAGTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTATGCTTGTGGCAGCAATAAATTCTTTATAGTGTAAGTAGTTC  647

seq1  CATTTGATGCATATTTTACCATGCCTCATGCCTGACATAAGGAAAACGTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGATGCATATTTTACCATGCCTCATGCCTGACATAAGGAAAACGTC  697

seq1  TCGTTACATAATAAATTTTTTAATATTAATAAAAACATAAGAGGCATTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTACATAATAAATTTTTTAATATTAATAAAAACATAAGAGGCATTTC  747

seq1  TAAAACATTTCTCAGTTTACCTCTCCTTGGTAATGCCAACCTCTCTCCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACATTTCTCAGTTTACCTCTCCTTGGTAATGCCAACCTCTCTCCTG  797

seq1  CTACTCACCCACTGTTTCTGCCATGGGGCAAATGACACCTCTGCAAAGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCACCCACTGTTTCTGCCATGGGGCAAATGACACCTCTGCAAAGAG  847

seq1  TAGGAAGAAATGATGCATGAGACAACTCTGATATAAAGGCTGGGAAGGCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGAAATGATGCATGAGACAACTCTGATATAAAGGCTGGGAAGGCC  897

seq1  CAATGTTTCTGTCTCAGTGAAGAGGGAGGCACAGAGGCATGCATACTCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTTCTGTCTCAGTGAAGAGGGAGGCACAGAGGCATGCATACTCTG  947

seq1  TCCTTTTATGCCCCTTTCTCCAGTCTCAGGGCAGAACCTCAACTGGCAGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTATGCCCCTTTCTCCAGTCTCAGGGCAGAACCTCAACTGGCAGG  997

seq1  AGAGGGATGAATTC  1013
      ||||||||||||||
seq2  AGAGGGATGAATTC  1011