BAC Information

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BAC

Clone NameB6Ng01-128F06
Chromosome19 (Build37)
Map Location 8,166,245 - 8,166,382
singlet/doubletsinglet
Overlap geneEG434674
Upstream geneD930010J01Rik, Flrt1, Otub1, Cox8a, Nat11, Rcor2, Mark2, AI846148, EG665419, 2700081O15Rik, Rtn3, LOC100039547, 5730596K20Rik, Hrasls3, Lgals12, Hrasls5, LOC433217, Slc22a19, LOC666543, BC014805, LOC632903, AB056442, LOC620946, LOC623030, 9530053H05Rik
Downstream geneLOC100039705, D630002G06Rik, EG633120, EG666601, LOC100039749, C730048C13Rik, LOC100040004, LOC666612, EG623402, Slc22a8, Slc22a6, Chrm1, Slc3a2, Snord22, Wdr74, 1700092M07Rik, Stx5a, LOC100039902, Nxf1, 0610006I08Rik, 1810059G22Rik, Taf6l, LOC100039957, Polr2g, Zbtb3, Ttc9c, Hnrpul2, Gng3, Bscl2, 1110067I12Rik, D19Ertd721e, AI462493, 1810009A15Rik, Ints5, Ganab, B3gat3, Rom1, Eml3, Mta2, Tut1, Eef1g, Ahnak, Scgb1a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128F06.bB6Ng01-128F06.g
ACCDH930209DH930210
length919817
definitionDH930209|Mus musculus domesticus DNA, BAC clone: B6Ng01-128F06, 5' end.DH930210|Mus musculus domesticus DNA, BAC clone: B6Ng01-128F06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttgggcctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
tgaagatgtcgccgcctgagaagctctgtggctcttgtctggaaggaggc
cggccgtctggagctgaggatggcgctgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgccgcccagaag
ctctgcgactctcgcccgtcccagaaacggctggcactctgtattccaca
cggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggct
cccgccggcgcctgtgccacaaacctctcaggccgggcagacccccgtgc
tctcaccaggaaggtggccggctgtctcgattgtttccaattctaagaag
ggcaaagtgtccacactttggtctttgttcttctttcagttcttgtgttt
tgcaaattgtattcctatatctcgggaaaactaagttctgggctaatatc
cacttatcagtgagtacat
gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccagctaattggtcaagaaaaaagccaaaagcggctggcgaaagccagc
gtactgttcaacctcccggcagtcggtttcaaggtccgccctatgcggag
cccccgccctgcgtagtgcgtcagcaatgcacagagaggcaatgcgcaga
gagatgcgcagagaggcaatgcgcagagagatgcgcagagaggcaatgcg
cagagagatgcgcagagaggcagtgcgcagagagatgcgcagagaggcag
tgcgcagagagatgcgcagagaggcagtgcgcagagaggcagtgcgcaga
gaggcagtgcgcagactcattcattcccagagaggaacaaaggaaaatac
aacaggcatttccagtctttgaaggagccgagggtgggcgtgtccacgct
ccggtagaatacttacaaattaaagaactcgccgagtcggtccgtaaata
cggaaccaatgctaattttaccttggtgcagtttagacaggctcgccggc
atggcactaactcctgctgactggcaaacggttgtaaaagccgctctccc
tagtatgggcaaatatatggaatggagagctctttggcatgaaactgcac
aagcgcaggcccgagcaaacgcagctgctttgactccagagcagagagat
tggacttttgacttgttaacgggtcagggagcttattctgctgatcaaca
aactaccattggggagctttatgcccagatttctttccacggctattagg
gccttggaagcgttctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_8166245_8166382
seq2: B6Ng01-128F06.b_827_965 (reverse)

seq1  ATGTACTCACTGATAAGTGGATATTAGCCCTGAATCTTAGGATATCCAAG  50
      |||||||||||||||||||||||||||||| ||| |||||  |  || ||
seq2  ATGTACTCACTGATAAGTGGATATTAGCCCAGAA-CTTAGTTTTCCCGAG  49

seq1  ATATAAG-ATATAATTTGCTAAACACATTTAACTCAA--GAGAAC-AAGA  96
      ||||| | ||| ||||||| |||||||   |||| ||   ||||| ||||
seq2  ATATAGGAATACAATTTGCAAAACACA-AGAACTGAAAGAAGAACAAAGA  98

seq1  CCAAAGTGTGGACACTTTGCCCCTTCTTAGAATAGGAAACAA  138
      ||||||||||||||||||| ||||||||||||| ||||||||
seq2  CCAAAGTGTGGACACTTTG-CCCTTCTTAGAATTGGAAACAA  139