BAC Information

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BAC

Clone NameB6Ng01-128N20
Chromosome19 (Build37)
Map Location 13,551,586 - 13,699,965
singlet/doubletdoublet
Overlap geneOlfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487
Upstream geneDtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474
Downstream geneGA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128N20.bB6Ng01-128N20.g
ACCDH930603DH930604
length9541,097
definitionDH930603|Mus musculus domesticus DNA, BAC clone: B6Ng01-128N20, 5' end.DH930604|Mus musculus domesticus DNA, BAC clone: B6Ng01-128N20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,699,012 - 13,699,965)(13,551,586 - 13,552,661)
sequence
gaattcaaggtgggagaatggttggtaagatataggtgagcagcagaact
tcattgctaaccacaactggaaaagcatgagctatttatgacttattcca
gatttctagttctatcataaatattattaaaacaatccacctaggactgt
ttcatcctacttaaaataactgattggcactttaaattttcattgaatat
ataatcattagaaggttcggtggaacatgcagtcatatttccacatatat
tacaggcaaaacctatcagtgcatttcatatattaataaaaccctgtcaa
catattattacattttcttccctttttctgctattatttttgctgagatc
aagcttggggtgttgggtatgttttgtaagtcctgtgtcactgacctata
acaccagctttcctttttattactttgtgtatattgataatgatttggtc
tctttttagaatctcattttgagggtttctaactatactcttccttttaa
gcactggtcagttgaaatgtatgtacactcttttgagcatattcttattg
ataacttaatgccatttagaaccccaaagaacatacacaaaaaggaaatt
tcaaacagttgcagtaaagattcagctgtttacacttcatgtcacaacca
tcatatttcatatagtgtcctattctatggatggggatgtaagaatagga
gaaggaggaatagacaccgttgtagtttacctgagattttgtagtctcaa
ttagaatatatttacagtgtatacttttgcattccctcagatgccatacc
ctctgccagactatatttcaaagtgtatatttcttgaactctatatagat
agaatggagctgtaacgaaattccttgtggtttgaataggaatagggctt
ttcaatctgagagagatctgggttagaatgtgaacacaaattctggagga
tttt
gaattcttctgacaaatggagattctccacagatacttaaaaaagagtca
agttgcactcatacaagaatttatcaaggcctaggaaatagtggggttat
ggtattgcgttattcatgagaaggtcttctagagcagaacaccctggtgc
tagctttcacaaggctcaaaggagtagcacaaattgtgactagggtatga
aatccttacctgttattaagctgaccctaggcaggatggttttatcttta
ctgtaaatattacctggttcctataagtccttttgaagtcattcatttgt
tttgtgtcagataacttcaatgtactttgcctgctgtgacatcctactga
ctttattttctgtattatataaggctggtgttcactttgtaataatacat
tcagattctacaaaatctcctgtgttgcatctgtctgtcatttattcact
gactccttgtctacctgcaactagagaccagttctatgcagaggagggac
caagagggtctgtggcaaataaccagactcagagtcctatgatcactcag
aaggaatccaaatggtgtttacacattcatccagtctctgttgtgattct
tctcactctcccactcattcattcccttttatagttactcactaattaaa
taatcaatttgtcacttttgttgaacaacagtactcatagagagcagtta
ctgtcctcaggaatgcacatttccatctggatatcagtttctataatcac
aattaatgcagttccactctgatatcgggttcccttatcaaacattcctt
tctgcatcctgcaaataagaacttcccattgctactgttcttgagtttga
tggctgcatttaactcaagacattatttagtgatgaagaaaagtctgtcc
ttctgatggcacctgttacatacatattcttgttataacttccctttgtt
gaatttcagtatttatgtactagaaacaacagaaacaagtgatggaaagt
attaactggtgccaagtaggcatagatgtggctaaaaaccatattgttaa
tatggtatgggaatagatattttaaaatgaattgttaacctgtacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13699012_13699965
seq2: B6Ng01-128N20.b_49_1002 (reverse)

seq1  AAAATCCTCAAGATTTGATGTTCAACATTCTAAACCCAGAATCTCTCTCA  50
      ||||||||| ||| ||  ||||| ||||||| ||||||| ||||||||||
seq2  AAAATCCTCCAGAATTTGTGTTC-ACATTCT-AACCCAG-ATCTCTCTCA  47

seq1  GATTGAAAGGCCCTATTCCTAATTCAACCAC-AGGAATTTCGTTACAGCT  99
      |||||||| |||||||||||| |  |||||| ||||||||||||||||||
seq2  GATTGAAAAGCCCTATTCCTATTCAAACCACAAGGAATTTCGTTACAGCT  97

seq1  -CATTCTATCTATATAGAGTTCAAG-AATATACACTTTGAAATATAGTCT  147
       |||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCATTCTATCTATATAGAGTTCAAGAAATATACACTTTGAAATATAGTCT  147

seq1  GGCAGAGGGTATGGCATCTGAGGGAATTGCAAAAGTATACACTGTAAATA  197
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGCAGAGGGTATGGCATCTGAGGGAA-TGCAAAAGTATACACTGTAAATA  196

seq1  TATTCTAATTGAGACTACAAAATCTCAGGT-AACTACAACGGTGTCTATT  246
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TATTCTAATTGAGACTACAAAATCTCAGGTAAACTACAACGGTGTCTATT  246

seq1  CCTCCTTCTCCTATTCTTACATCCCCATCCATAGAATAGGACACTATATG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTCTCCTATTCTTACATCCCCATCCATAGAATAGGACACTATATG  296

seq1  AAATATGATGGTTGTGACATGAAGTGTAAACAGCTGAATCTTTACTGCAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGATGGTTGTGACATGAAGTGTAAACAGCTGAATCTTTACTGCAA  346

seq1  CTGTTTGAAATTTCCTTTTTGTGTATGTTCTTTGGGGTTCTAAATGGCAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGAAATTTCCTTTTTGTGTATGTTCTTTGGGGTTCTAAATGGCAT  396

seq1  TAAGTTATCAATAAGAATATGCTCAAAAGAGTGTACATACATTTCAACTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTATCAATAAGAATATGCTCAAAAGAGTGTACATACATTTCAACTG  446

seq1  ACCAGTGCTTAAAAGGAAGAGTATAGTTAGAAACCCTCAAAATGAGATTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGCTTAAAAGGAAGAGTATAGTTAGAAACCCTCAAAATGAGATTC  496

seq1  TAAAAAGAGACCAAATCATTATCAATATACACAAAGTAATAAAAAGGAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAGACCAAATCATTATCAATATACACAAAGTAATAAAAAGGAAA  546

seq1  GCTGGTGTTATAGGTCAGTGACACAGGACTTACAAAACATACCCAACACC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGTTATAGGTCAGTGACACAGGACTTACAAAACATACCCAACACC  596

seq1  CCAAGCTTGATCTCAGCAAAAATAATAGCAGAAAAAGGGAAGAAAATGTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTTGATCTCAGCAAAAATAATAGCAGAAAAAGGGAAGAAAATGTA  646

seq1  ATAATATGTTGACAGGGTTTTATTAATATATGAAATGCACTGATAGGTTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATGTTGACAGGGTTTTATTAATATATGAAATGCACTGATAGGTTT  696

seq1  TGCCTGTAATATATGTGGAAATATGACTGCATGTTCCACCGAACCTTCTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTAATATATGTGGAAATATGACTGCATGTTCCACCGAACCTTCTA  746

seq1  ATGATTATATATTCAATGAAAATTTAAAGTGCCAATCAGTTATTTTAAGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTATATATTCAATGAAAATTTAAAGTGCCAATCAGTTATTTTAAGT  796

seq1  AGGATGAAACAGTCCTAGGTGGATTGTTTTAATAATATTTATGATAGAAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGAAACAGTCCTAGGTGGATTGTTTTAATAATATTTATGATAGAAC  846

seq1  TAGAAATCTGGAATAAGTCATAAATAGCTCATGCTTTTCCAGTTGTGGTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATCTGGAATAAGTCATAAATAGCTCATGCTTTTCCAGTTGTGGTT  896

seq1  AGCAATGAAGTTCTGCTGCTCACCTATATCTTACCAACCATTCTCCCACC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGAAGTTCTGCTGCTCACCTATATCTTACCAACCATTCTCCCACC  946

seq1  TTGAATTC  954
      ||||||||
seq2  TTGAATTC  954

seq1: chr19_13551586_13552661
seq2: B6Ng01-128N20.g_89_1165

seq1  GATTCTCCACAGATACTTAAAAAAGAGTCAAGTTGCACTCATACAAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCCACAGATACTTAAAAAAGAGTCAAGTTGCACTCATACAAGAAT  50

seq1  TTATCAAGGCCTAGGAAATAGTGGGGTTATGGTATTGCGTTATTCATGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAGGCCTAGGAAATAGTGGGGTTATGGTATTGCGTTATTCATGAG  100

seq1  AAGGTCTTCTAGAGCAGAACACCCTGGTGCTAGCTTTCACAAGGCTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTTCTAGAGCAGAACACCCTGGTGCTAGCTTTCACAAGGCTCAAA  150

seq1  GGAGTAGCACAAATTGTGACTAGGGTATGAAATCCTTACCTGTTATTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAGCACAAATTGTGACTAGGGTATGAAATCCTTACCTGTTATTAAG  200

seq1  CTGACCCTAGGCAGGATGGTTTTATCTTTACTGTAAATATTACCTGGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCTAGGCAGGATGGTTTTATCTTTACTGTAAATATTACCTGGTTC  250

seq1  CTATAAGTCCTTTTGAAGTCATTCATTTGTTTTGTGTCAGATAACTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGTCCTTTTGAAGTCATTCATTTGTTTTGTGTCAGATAACTTCAA  300

seq1  TGTACTTTGCCTGCTGTGACATCCTACTGACTTTATTTTCTGTATTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTTGCCTGCTGTGACATCCTACTGACTTTATTTTCTGTATTATAT  350

seq1  AAGGCTGGTGTTCACTTTGTAATAATACATTCAGATTCTACAAAATCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGGTGTTCACTTTGTAATAATACATTCAGATTCTACAAAATCTCC  400

seq1  TGTGTTGCATCTGTCTGTCATTTATTCACTGACTCCTTGTCTACCTGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGCATCTGTCTGTCATTTATTCACTGACTCCTTGTCTACCTGCAA  450

seq1  CTAGAGACCAGTTCTATGCAGAGGAGGGACCAAGAGGGTCTGTGGCAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGACCAGTTCTATGCAGAGGAGGGACCAAGAGGGTCTGTGGCAAAT  500

seq1  AACCAGACTCAGAGTCCTATGATCACTCAGAAGGAATCCAAATGGTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGACTCAGAGTCCTATGATCACTCAGAAGGAATCCAAATGGTGTTT  550

seq1  ACACATTCATCCAGTCTCTGTTGTGATTCTTCTCACTCTCCCACTCATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTCATCCAGTCTCTGTTGTGATTCTTCTCACTCTCCCACTCATTC  600

seq1  ATTCCCTTTTATAGTTACTCACTAATTAAATAATCAATTTGTCACTTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTTTTATAGTTACTCACTAATTAAATAATCAATTTGTCACTTTTG  650

seq1  TTGAACAACAGTACTCATAGAGAGCAGTTACTGTCCTCAGGAATGCACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAACAGTACTCATAGAGAGCAGTTACTGTCCTCAGGAATGCACAT  700

seq1  TTCCATCTGGATATCAGTTTCTATAATCACAATTAATGCAGTTCCACTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTGGATATCAGTTTCTATAATCACAATTAATGCAGTTCCACTCT  750

seq1  GATATCGGGTTCCCTTATCAAACATTCC-TTCTGCATCCTGCAAATAAGA  799
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GATATCGGGTTCCCTTATCAAACATTCCTTTCTGCATCCTGCAAATAAGA  800

seq1  ACTTCCCATTGCTACTGTTCTTGAGTTTGATGGCTGCATTTAACTCAAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCATTGCTACTGTTCTTGAGTTTGATGGCTGCATTTAACTCAAGA  850

seq1  CATTATTTAGTGATGAAGAAAAGTCTGTCCTTCTGATGGCACCTGTTACC  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CATTATTTAGTGATGAAGAAAAGTCTGTCCTTCTGATGGCACCTGTTA-C  899

seq1  ATACATAATCCTGTTATAAACTTCCCTTTGTTGAATTTCAGTTATTTATG  949
      ||||||| || |||||| ||||||||||||||||||||||| ||||||||
seq2  ATACATATTCTTGTTAT-AACTTCCCTTTGTTGAATTTCAG-TATTTATG  947

seq1  TACTAGAAACAACAGAAACAAAGTGATGGAAAGTA-TAACT-GTGCCAAG  997
      ||||||||||||||||||| ||||||||||||||| ||||| ||||||||
seq2  TACTAGAAACAACAGAAAC-AAGTGATGGAAAGTATTAACTGGTGCCAAG  996

seq1  TAGGCATTAGATGTGGCTAAAAAACTATA-TGTT-ATATGATAT-GGAAT  1044
      |||||| ||||||||||| |||||| ||| |||| ||||| ||| |||||
seq2  TAGGCA-TAGATGTGGCT-AAAAACCATATTGTTAATATGGTATGGGAAT  1044

seq1  AGATATTTTAAAATGAATTGTT-ACTTGTACAC  1076
      |||||||||||||||||||||| || |||||||
seq2  AGATATTTTAAAATGAATTGTTAACCTGTACAC  1077