BAC Information

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BAC

Clone NameB6Ng01-129J03
Chromosome19 (Build37)
Map Location 39,402,503 - 39,403,087
singlet/doubletsinglet
Overlap geneCyp2c29
Upstream geneTmem20, LOC100042483, Plce1, EG667587, Noc3l, Tbc1d12, Hells, LOC209753, Cyp2c55, LOC100042507, Cyp2c65, LOC668278, Cyp2c66
Downstream geneCyp2c38, Cyp2c39, C730004C24Rik, 9030012A22Rik, Cyp2c40, LOC100043108, LOC100042523, Cyp2c37, Cyp2c54, Cyp2c50, Cyp2c70, LOC545289, LOC676923, Pdlim1, LOC435599, Sorbs1, A930028N01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129J03.bB6Ng01-129J03.g
ACCDH931118DH931119
length5791,157
definitionDH931118|Mus musculus domesticus DNA, BAC clone: B6Ng01-129J03, 5' end.DH931119|Mus musculus domesticus DNA, BAC clone: B6Ng01-129J03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttgatgaattattctttttagagtctgattcatatgaggtgtatggcgtc
agatgtggtgagctagaatagtcagtgataagtaaagcaagagtctaatc
tgtaggaaagggagaagagactctgactccactcagcagggggtggacaa
ggggtagcccccaataccagggaccctggggtgacacccttggccctggg
gatatgggagagagggcagagggagagcagttcccacacaggagagagtc
tttagtccggtccatggctgaagaacaggaaggcctatcgggtgattaga
cacagctcattagaagaaagcctatcccatcatccaagcacagcgggcct
tgatgaacagagacagtttatggttttagagctttattatagaaaggcag
ggggaaagagagaaagtaaaagagagagggagaccagccatagctaagag
gagagaaggaagaaaaggagagagagagagagaagaaaggctagagtaag
aggttatagaaagagagcaaggagaaagagtaagagggagagagtaagag
aatatggagagagtatgaggagagagtga
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
agattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atgaatgggcctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggta
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
attatccaaacgctgacaccattgcttcactatgcaggattttttctgaa
ggacccagatgtagctgtctcttgtgggaactattgccggggcctagcta
acgtcagagtggatgctcacaagtcagctaatggatggatcacagggctc
caatggaggagctagagaaagtagccaaggagctaaggatcttgcaaccc
tataggtggaacacattatggactacagtacctggagctctgactctagc
tgcatatgttcaaagatgtctagtcgtcatctgaagagaagcccattgaa
cgcaactttaatgccatcgggaacgcgagtcaaaggggagtggtgggtag
ggaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_39402503_39403087
seq2: B6Ng01-129J03.b_51_635

seq1  GAATTCTTGATGAATTATTCTTTTTAGAGTCTGATTCATATGAGGTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATGAATTATTCTTTTTAGAGTCTGATTCATATGAGGTGTAT  50

seq1  GGCGTCAGATGTGGTGAGCTAGAATAGTCAGTGATAAGTAAAGCAAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTCAGATGTGGTGAGCTAGAATAGTCAGTGATAAGTAAAGCAAGAGT  100

seq1  CTAATCTGTAGGAAAGGGAGAAGAGACTCTGACTCCACTCAGCAGGGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCTGTAGGAAAGGGAGAAGAGACTCTGACTCCACTCAGCAGGGGGT  150

seq1  GGACAAGGGGTAGCCCCCAATACCAGGGACCCTGGGGTGACACCCTTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAGGGGTAGCCCCCAATACCAGGGACCCTGGGGTGACACCCTTGGC  200

seq1  CCTGGGGATATGGGAGAGAGGGCAGAGGGAGAGCAGTTCCCACACAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGATATGGGAGAGAGGGCAGAGGGAGAGCAGTTCCCACACAGGAG  250

seq1  AGAGTCTTTAGTCCGGTCCATGGCTGAAGAACAGGAAGGCCTATCGGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTTTAGTCCGGTCCATGGCTGAAGAACAGGAAGGCCTATCGGGTG  300

seq1  ATTAGACACAGCTCATTAGAAGAAAGCCTATCCCATCATCCAAGCACAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACACAGCTCATTAGAAGAAAGCCTATCCCATCATCCAAGCACAGC  350

seq1  GGGCCTTGATGAACAGAGACAGTTTATGGTTTTAGAGCTTTATTATAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTGATGAACAGAGACAGTTTATGGTTTTAGAGCTTTATTATAGAA  400

seq1  AGGCAGGGGGAAAGAGAGAAAGTAAAAGAGAGAGGGAGACCAGCCATAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGGGAAAGAGAGAAAGTAAAAGAGAGAGGGAGACCAGCCATAGC  450

seq1  TAAGAGGAGAGAAGGAAGAAAAGGAGAGAGAGAGAGAGAAGAAAGGCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGAGAGAAGGAAGAAAAGGAGAGAGAGAGAGAGAAGAAAGGCTAG  500

seq1  AGTAAGAGGTTATAGAAAGAGAGCAAGGAGAAAGAGTAAGAGGGAGAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAGGTTATAGAAAGAGAGCAAGGAGAAAGAGTAAGAGGGAGAGAG  550

seq1  TAAGAGAATATGGAGAGAGTATGAGGAGAGAGTGA  585
      |||||||||||||||||||||||||||||||||||
seq2  TAAGAGAATATGGAGAGAGTATGAGGAGAGAGTGA  585