BAC Information

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BAC

Clone NameB6Ng01-132F05
Chromosome19 (Build37)
Map Location 52,002,291 - 52,003,200
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042924, LOC100042928, LOC668536
Downstream geneLOC100042936, Ins1, LOC100043450
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132F05.bB6Ng01-132F05.g
ACCDH933156DH933157
length1,0321,244
definitionDH933156|Mus musculus domesticus DNA, BAC clone: B6Ng01-132F05, 5' end.DH933157|Mus musculus domesticus DNA, BAC clone: B6Ng01-132F05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaaggatgttgatagtaggttcatagcagtgttttattctgt
aagctcattacaagtgcaaagcaagagtttcacgtggctttgctttgtca
cagtgcacacctgtggcttcacccttgaacttgaccttgatgaatgtttt
tccttgataacaaatctgtcccaagcctgtatttctcagtgtaattcatg
aaatcttagtatattccttaatatgcagcatttacttactactctataag
aagggggcacgtcatattcttgactctaactgtattacatattgctggca
agacaactaaaaccttttccttaaaacttgttcgaaagattatttgactc
aattcacaaattctacaaagtccttaattcatctaaatggcatcaattca
tgaaagtttgtcttcatgttcattagtaggaaatttgcccaataggatgg
gctgacacccaggaatcattaggctatgcaatagtggcaggaaagacata
ttagcaggaaagagcaatcctggaatgaagtctctgaggcccctgcatct
cagggtgttccaatcacagccatgtaaaaacagtgagacatctccagaag
gccgcttgccatagcttttcctagatggcttctgtcacttttatgattcg
gcttccttggcttcctaaggtagagaaacatcaagttttgttttgttttt
tgtttttaataacattttgttttagagttgttaaagaaggacttgggaaa
gaaaaagaaagtgaaatatttatgtgtctgtttatgtggaaaatcatgcc
aaattgtcatatgtactgatcctgagccatttgttggctaacattgagga
actataccctgtaatacttttgaaacgagagaaaagcactcagaaaacaa
ggattttttttggggggggtcacccaaaatgaggcagagagagacaacat
atctttagtctgtctctctcctctctgctctcatcttctactaacgagag
caatgtgaagaaatggagagagatgaagagat
gaattctaggttctcggatcccatcaagactagtctgcacaggtgaaagt
gtggactacagaagctaacagcttctgggacaggcagaagccacagagct
tttgaggcagaccccgtttctggctccagatatccgagcaccttccctgc
cagaggagaggtgtctgcccccacccaggagggctttgcaagagcacctg
ggggagccaccttggttcccagatcccgccaagactagtctgtgcaggtg
agagtgtggactacagaagctagctgcttctgggacaggtggaagccaca
gagcttctgagtcagaccctgtatcaggctgcagacatctggacaccttc
cctgccagaggagaggtgtctgcccccacccgggagggtttgccagacac
ctgtgggagccatcttggttccctgatccctctgagactagtctgtgcaa
gtgagagtgtggactacagaagctaacagcttctggaacaggccctgttt
caggccttcatcttctgccaggagacaggtctgaatgccagatatctgtg
caccttccctggaagaggagagcttgcctgcagacagtacttttaaccac
tgaaacttaggagagatctagtctcccagatctgctgatagaggctaaca
gaatcgtgagagggacaagttctaaccacagacagctataacaactaacg
ccagagattaccaaatggctaaaggcaaacataagaatcttgctgacaga
aaccaagaccactcaccatcatcagaacccagcactcccacctcagccag
tcctgggtaccccaacacacctgaaaagctataccctgatttaaaagcac
atctcatgatgatggtagaggacatcaagaaagactttaataaatcactt
aaagaagtacaggagacactgctagagagtacaagtcttaaagcaaacat
gaaacacaaccaagcagtagaattccttaagaaaaacaggaaacacatca
aacagtgatggaaatgaacaaaccatactagacttgaaaaggatgttgac
ccaataaagaaaacccaagtgaggcatgctgagatgatcctaggaaggaa
tctggaacttaatgccgcctcacaacgaataaggatggaagaaattcagt
tcgaatttctaaaggaacgtcgccattcatatgcagtgcataagatctat
ccaactcggatcgtactataggccaccctggcgttatgatgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_52002291_52003200
seq2: B6Ng01-132F05.b_187_1080

seq1  GATGAATGTTTTTCCTTGATAACAAATCTGTCCCAAGCCTGTATTTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATGTTTTTCCTTGATAACAAATCTGTCCCAAGCCTGTATTTCTCA  50

seq1  GTGTAATTCATGAAATCTTAGTATATTCCTTAATATGCAGCATTTACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATTCATGAAATCTTAGTATATTCCTTAATATGCAGCATTTACTTA  100

seq1  CTACTCTATAAGAAGGGGGCACGTCATATTCTTGACTCTAACTGTATTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTATAAGAAGGGGGCACGTCATATTCTTGACTCTAACTGTATTAC  150

seq1  ATATTGCTGGCAAGACAACTAAAACCTTTTCCTTAAAACTTGTTCGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCTGGCAAGACAACTAAAACCTTTTCCTTAAAACTTGTTCGAAAG  200

seq1  ATTATTTGACTCAATTCACAAATTCTACAAAGTCCTTAATTCATCTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGACTCAATTCACAAATTCTACAAAGTCCTTAATTCATCTAAAT  250

seq1  GGCATCAATTCATGAAAGTTTGTCTTCATGTTCATTAGTAGGAAATTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAATTCATGAAAGTTTGTCTTCATGTTCATTAGTAGGAAATTTGC  300

seq1  CCAATAGGATGGGCTGACACCCAGGAATCATTAGGCTATGCAATAGTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAGGATGGGCTGACACCCAGGAATCATTAGGCTATGCAATAGTGGC  350

seq1  AGGAAAGACATATTAGCAGGAAAGAGCAATCCTGGAATGAAGTCTCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGACATATTAGCAGGAAAGAGCAATCCTGGAATGAAGTCTCTGAG  400

seq1  GCCCCTGCATCTCAGGGTGTTCCAATCACAGCCATGTAAAAACAGTGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGCATCTCAGGGTGTTCCAATCACAGCCATGTAAAAACAGTGAGA  450

seq1  CATCTCCAGAAGGCCGCTTGCCATAGCTTTTCCTAGATGGCTTCTGTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCAGAAGGCCGCTTGCCATAGCTTTTCCTAGATGGCTTCTGTCAC  500

seq1  TTTTATGATTCGGCTTCCTTGGCTTCCTAAGGTAGAGAAACATCAAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGATTCGGCTTCCTTGGCTTCCTAAGGTAGAGAAACATCAAGTTT  550

seq1  TGTTTTGTTTTTTGTTTTTAATAACATTTTGTTTTAGAGTTGTTAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTTTGTTTTTAATAACATTTTGTTTTAGAGTTGTTAAAGAA  600

seq1  GGACTTGGGAAAGAAAAAGAAAGTGAAATATTTATGTGTCTGTTTATGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGGGAAAGAAAAAGAAAGTGAAATATTTATGTGTCTGTTTATGTG  650

seq1  GAAAATCATGCCAAATTGTCATATGTACTGATCCTGAGCCATTTGTTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCATGCCAAATTGTCATATGTACTGATCCTGAGCCATTTGTTGGC  700

seq1  TAACATTGAGGAACTATAACCCTGTAATACTTTGAAAACGAGAGAAAAGC  750
      ||||||||||||||||| |||||||||||||||  |||||||||||||||
seq2  TAACATTGAGGAACTAT-ACCCTGTAATACTTTTGAAACGAGAGAAAAGC  749

seq1  ACTCAGAAAAACAAGGATTTTTTTTGGGGGGGGTCACCCAAAAAATGAGG  800
      |||||| ||||||||||||||||||||||||||||||||  |||||||||
seq2  ACTCAG-AAAACAAGGATTTTTTTTGGGGGGGGTCACCC--AAAATGAGG  796

seq1  CAAGAGAAGAGACAACATAATCTTTAGTCTGTCTCTCTCCTCTCTGCCTC  850
      | |||| ||||||||||| ||||||||||||||||||||||||||| |||
seq2  C-AGAG-AGAGACAACAT-ATCTTTAGTCTGTCTCTCTCCTCTCTG-CTC  842

seq1  TCATCTTCTCACTAAACGAGAAGCAAATGTGGAGGAAAATAGGAGAGAGA  900
      ||||||||| ||| |||||| ||| |||||| ||  |||| |||||||||
seq2  TCATCTTCT-ACT-AACGAG-AGC-AATGTGAAG--AAAT-GGAGAGAGA  885

seq1  TAGAAGAGAT  910
      | ||||||||
seq2  T-GAAGAGAT  894