BAC Information

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BAC

Clone NameB6Ng01-133E24
Chromosome19 (Build37)
Map Location 7,802,224 - 7,902,338
singlet/doubletdoublet
Overlap geneBC014805, LOC632903
Upstream geneRps6ka4, Ccdc88, Prdx5, 0610038D11Rik, Esrra, 1700019N12Rik, Kcnk4, Gpr137, Bad, Plcb3, Ppp1r14b, Fkbp2, Vegfb, Dnajc4, Nudt22, Trpt1, BC032204, Stip1, D930010J01Rik, Flrt1, Otub1, Cox8a, Nat11, Rcor2, Mark2, AI846148, EG665419, 2700081O15Rik, Rtn3, LOC100039547, 5730596K20Rik, Hrasls3, Lgals12, Hrasls5, LOC433217, Slc22a19, LOC666543
Downstream geneAB056442, LOC620946, LOC623030, 9530053H05Rik, EG434674, LOC100039705, D630002G06Rik, EG633120, EG666601, LOC100039749, C730048C13Rik, LOC100040004, LOC666612, EG623402, Slc22a8, Slc22a6, Chrm1, Slc3a2, Snord22, Wdr74, 1700092M07Rik, Stx5a, LOC100039902, Nxf1, 0610006I08Rik, 1810059G22Rik, Taf6l, LOC100039957, Polr2g, Zbtb3, Ttc9c, Hnrpul2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133E24.bB6Ng01-133E24.g
ACCDH933892DH933893
length1,0441,119
definitionDH933892|Mus musculus domesticus DNA, BAC clone: B6Ng01-133E24, 5' end.DH933893|Mus musculus domesticus DNA, BAC clone: B6Ng01-133E24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,901,286 - 7,902,338)(7,802,224 - 7,803,349)
sequence
gaattctgtttgttttctaatgaaagagagaaatgttggggatccataca
aaagggaatgtgggaaagaactgggagacattcgagagggtacattttaa
tcagtatatattaaatgaaaaaaagcctattttaaattaaaatgaacctt
ggggtggtaagaatgtaaaagtaaagttattagaaagaatttaggggaaa
atgtcatctaaacacattgactaggagtgtgaataattactaaaacattt
tttaatttaaaaaaatgttataacattcactacaatcaagttacagaaaa
actctaaaaactgattgaatctatcatgcattccataaattctctacctg
tccttaaaaatctataataaacggtattttcaggatgcaatgatattatt
aatttcactcaagtatatactccaaaatatggataggcatttatagtttc
acaactaaaatagtcttctgggaataatcctattcttgactttagacatg
aattttaagcaatatgtgtggctcgcctctttatttcttacagatttgta
caaatggtacctattatgggctttggcatgcacctccaacacctgaaaag
caatgtcttcctaatccaaactcttacttctgcagtctggattccagcca
ctgctcttggagggtttttactgaattacattggctgtagaataagtcaa
ctattgccctgtttgctgtgtggaatcttcattctgagcatagtgtctgt
gcctcaaggtaagaaaagaccttaacacaaaagaaaagtaatacccagtc
cctttcctcagtatttgtcaggttctaattttgagaaaagaaatacatca
gagaattatctgttaccagacaattagggaacattcttcaactcacatgt
tgaaagaagagccaaaagccagtaagtctggtttaattttatgaaagtcc
agtgtatgtataaatgtatttgtgactctctggtcacacaaaaacatcaa
agctggatagtgtatcagacaatgagacacttgtatgagtacaa
gaattcagtagcaactcctgtcagactagttttgcccagggggatattta
gttgatttctcaattttgctattggtacgtctgttttttccctccattga
ttaattaattaattaattaattaattaattaattaattaacttttcatgc
tgattatagcccccctcttctcctagtcccccctcacacagcccctcccc
ccatttcccccttcatctccaaagacaagaaagtcccccatcctcccagg
tatcaactcatcctgacacctgaaatcaatgcaggactagccaatcgtct
cccattgaggtcagacaaggcagcccaattagggaaaaacaatccacagg
caggcaaaagagtcagggtaagtcccccattccagttgttgacagagtag
catgaggaccaagctgcatatctgctacatatatgcagggggctaggtcc
agccattgtatgctctttggttggtggttcagactctgagatcctcaagg
gtccaggttagtttactctgttggtcttcttgtggagttcctatcccatc
tgggttcctcaatccttcccccaactcttccacaagactttttgagctct
gtctaatgtttggctatcagactctgcatctgttttggtcagctgctgag
tggagcctcccagaggacagttatactaggctccagtctgtgaacccagg
atgacagatacaaatacagtctgaggctcaaaggtagttgaaagaggaac
acaggcctctaatatgtccctattcatcctctgaggatagctcagcaaat
accctcaaattgacaggagttgctactgaattcatttatttctgtgtcgt
atagggccccaatgtatccaggccagcagtgacaaatacagctgttaaca
gtgtcttcacatggtgttcaattgtaacaaggctttgaccaataaagagg
aaactttgtgcttggacaccaaggcaagcattgtgactggaagtgcacaa
atgtgtttctgatcaccgaatgaatgatactgatgctcaggaatagggaa
gatacataatattgattgttatgtatatggttcctgaatactgttgattc
cctatggaggtgctgtccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_7901286_7902338
seq2: B6Ng01-133E24.b_49_1092 (reverse)

seq1  TTGTACTTCAATACAAGTGGTCCTCATTGTCTTGATACAACTATCCAGGC  50
      |||||||   |||||||||   ||||||||| |||||| |||||||| ||
seq2  TTGTACT--CATACAAGTG--TCTCATTGTC-TGATAC-ACTATCCA-GC  43

seq1  TTTGATTGTTTTTGTGGTGACCAGAGAGTCACAAATACATTTATACATAC  100
      ||||| ||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTGA-TGTTTTTGT-GTGACCAGAGAGTCACAAATACATTTATACATAC  91

seq1  ACTGGACTTTCATAAAATTAAACCAGACTTACTGGCTTTTGGCTCTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACTTTCATAAAATTAAACCAGACTTACTGGCTTTTGGCTCTTCTT  141

seq1  TCAACATGTGAGTTGAAGAATGTTCCCTAATTGTCTGGTAACAGATAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATGTGAGTTGAAGAATGTTCCCTAATTGTCTGGTAACAGATAATT  191

seq1  CTCTGATGTATTTCTTTTCTCAAAATTAGAACCTGACAAATACTGAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATGTATTTCTTTTCTCAAAATTAGAACCTGACAAATACTGAGGAA  241

seq1  AGGGACTGGGTATTACTTTTCTTTTGTGTTAAGGTCTTTTCTTACCTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTGGGTATTACTTTTCTTTTGTGTTAAGGTCTTTTCTTACCTTGA  291

seq1  GGCACAGACACTATGCTCAGAATGAAGATTCCACACAGCAAACAGGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGACACTATGCTCAGAATGAAGATTCCACACAGCAAACAGGGCAA  341

seq1  TAGTTGACTTATTCTACAGCCAATGTAATTCAGTAAAAACCCTCCAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGACTTATTCTACAGCCAATGTAATTCAGTAAAAACCCTCCAAGAG  391

seq1  CAGTGGCTGGAATCCAGACTGCAGAAGTAAGAGTTTGGATTAGGAAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCTGGAATCCAGACTGCAGAAGTAAGAGTTTGGATTAGGAAGACA  441

seq1  TTGCTTTTCAGGTGTTGGAGGTGCATGCCAAAGCCCATAATAGGTACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTCAGGTGTTGGAGGTGCATGCCAAAGCCCATAATAGGTACCAT  491

seq1  TTGTACAAATCTGTAAGAAATAAAGAGGCGAGCCACACATATTGCTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACAAATCTGTAAGAAATAAAGAGGCGAGCCACACATATTGCTTAAA  541

seq1  ATTCATGTCTAAAGTCAAGAATAGGATTATTCCCAGAAGACTATTTTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGTCTAAAGTCAAGAATAGGATTATTCCCAGAAGACTATTTTAGT  591

seq1  TGTGAAACTATAAATGCCTATCCATATTTTGGAGTATATACTTGAGTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAACTATAAATGCCTATCCATATTTTGGAGTATATACTTGAGTGAA  641

seq1  ATTAATAATATCATTGCATCCTGAAAATACCGTTTATTATAGATTTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAATATCATTGCATCCTGAAAATACCGTTTATTATAGATTTTTAA  691

seq1  GGACAGGTAGAGAATTTATGGAATGCATGATAGATTCAATCAGTTTTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGTAGAGAATTTATGGAATGCATGATAGATTCAATCAGTTTTTAG  741

seq1  AGTTTTTCTGTAACTTGATTGTAGTGAATGTTATAACATTTTTTTAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTCTGTAACTTGATTGTAGTGAATGTTATAACATTTTTTTAAATT  791

seq1  AAAAAATGTTTTAGTAATTATTCACACTCCTAGTCAATGTGTTTAGATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGTTTTAGTAATTATTCACACTCCTAGTCAATGTGTTTAGATGA  841

seq1  CATTTTCCCCTAAATTCTTTCTAATAACTTTACTTTTACATTCTTACCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCCCCTAAATTCTTTCTAATAACTTTACTTTTACATTCTTACCAC  891

seq1  CCCAAGGTTCATTTTAATTTAAAATAGGCTTTTTTTCATTTAATATATAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGTTCATTTTAATTTAAAATAGGCTTTTTTTCATTTAATATATAC  941

seq1  TGATTAAAATGTACCCTCTCGAATGTCTCCCAGTTCTTTCCCACATTCCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAAATGTACCCTCTCGAATGTCTCCCAGTTCTTTCCCACATTCCC  991

seq1  TTTTGTATGGATCCCCAACATTTCTCTCTTTCATTAGAAAACAAACAGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATGGATCCCCAACATTTCTCTCTTTCATTAGAAAACAAACAGAA  1041

seq1  TTC  1053
      |||
seq2  TTC  1044

seq1: chr19_7802224_7803349
seq2: B6Ng01-133E24.g_66_1184

seq1  GAATTCAGTAGCAACTCCTGTCAGACTAGTTTTGCCCAGGGGGATATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGCAACTCCTGTCAGACTAGTTTTGCCCAGGGGGATATTTA  50

seq1  GTTGATTTCTCAATTTTGCTATTGGTACGTCTGTTTTTTCCCTCCATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTTCTCAATTTTGCTATTGGTACGTCTGTTTTTTCCCTCCATTGA  100

seq1  TTAATTAATTAATTAATTAATTAATTAATTAATTAATTAACTTTTCATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAATTAATTAATTAATTAATTAATTAATTAATTAACTTTTCATGC  150

seq1  TGATTATAGCCCCCCTCTTCTCCTAGTCCCCCCTCACACAGCCCCTCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATAGCCCCCCTCTTCTCCTAGTCCCCCCTCACACAGCCCCTCCCC  200

seq1  CCATTTCCCCCTTCATCTCCAAAGACAAGAAAGTCCCCCATCCTCCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCCCCTTCATCTCCAAAGACAAGAAAGTCCCCCATCCTCCCAGG  250

seq1  TATCAACTCATCCTGACACCTGAAATCAATGCAGGACTAGCCAATCGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAACTCATCCTGACACCTGAAATCAATGCAGGACTAGCCAATCGTCT  300

seq1  CCCATTGAGGTCAGACAAGGCAGCCCAATTAGGGAAAAACAATCCACAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGAGGTCAGACAAGGCAGCCCAATTAGGGAAAAACAATCCACAGG  350

seq1  CAGGCAAAAGAGTCAGGGTAAGTCCCCCATTCCAGTTGTTGACAGAGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAAAAGAGTCAGGGTAAGTCCCCCATTCCAGTTGTTGACAGAGTAG  400

seq1  CATGAGGACCAAGCTGCATATCTGCTACATATATGCAGGGGGCTAGGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGACCAAGCTGCATATCTGCTACATATATGCAGGGGGCTAGGTCC  450

seq1  AGCCATTGTATGCTCTTTGGTTGGTGGTTCAGACTCTGAGATCCTCAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTGTATGCTCTTTGGTTGGTGGTTCAGACTCTGAGATCCTCAAGG  500

seq1  GTCCAGGTTAGTTTACTCTGTTGGTCTTCTTGTGGAGTTCCTATCCCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGGTTAGTTTACTCTGTTGGTCTTCTTGTGGAGTTCCTATCCCATC  550

seq1  TGGGTTCCTCAATCCTTCCCCCAACTCTTCCACAAGACTTTTTGAGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCCTCAATCCTTCCCCCAACTCTTCCACAAGACTTTTTGAGCTCT  600

seq1  GTCTAATGTTTGGCTATCAGACTCTGCATCTGTTTTGGTCAGCTGCTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAATGTTTGGCTATCAGACTCTGCATCTGTTTTGGTCAGCTGCTGAG  650

seq1  TGGAGCCTCCCAGAGGACAGTTATACTAGGCTCCAGTCTGTGAACCCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCCTCCCAGAGGACAGTTATACTAGGCTCCAGTCTGTGAACCCAGG  700

seq1  ATGACAGATACAAATACAGTCTGAGGCTCAAAGGTAGTTGAAAGAGGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGATACAAATACAGTCTGAGGCTCAAAGGTAGTTGAAAGAGGAAC  750

seq1  ACAGGCCTCTAATATGTCCCTATTCATCCTCTGAGGATAGCTCAGCAAAA  800
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACAGGCCTCTAATATGTCCCTATTCATCCTCTGAGGATAGCTCAGC-AAA  799

seq1  TACCCTCAAATTGACAGGAGTTGCTACTGAATTCATTTATTTCTGTGTCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTCAAATTGACAGGAGTTGCTACTGAATTCATTTATTTCTGTGTCG  849

seq1  TATAGGGCCCCAATGTATCCAGGCCAGCAGTGACAAATACAGCTGTTAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGCCCCAATGTATCCAGGCCAGCAGTGACAAATACAGCTGTTAAC  899

seq1  AGTGTCTTCACATGGTGTTCAATTGTAACAAGGCTTTGACCAATAAAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTTCACATGGTGTTCAATTGTAACAAGGCTTTGACCAATAAAGAG  949

seq1  GAAACTGTGTGCTTGGACACCAAGGCAAGCATTGTGACTTGGAAGTGCAC  1000
      |||||| ||||||||||||||||||||||||||||||| |||||||||||
seq2  GAAACTTTGTGCTTGGACACCAAGGCAAGCATTGTGAC-TGGAAGTGCAC  998

seq1  AAATGTGTTTCTGATCACCGAATGAATGATACTGTATGCCTCAAGGAAAT  1050
      |||||||||||||||||||||||||||||||||| ||| ||| |||||  
seq2  AAATGTGTTTCTGATCACCGAATGAATGATACTG-ATG-CTC-AGGAATA  1045

seq1  AGGAAGATACATATATTTGTATATGTATGTATATGGTTCACTG-ATACTG  1099
       |||||||||||| || |  ||   |||||||||||||| ||| ||||||
seq2  GGGAAGATACATA-ATATTGATTGTTATGTATATGGTTC-CTGAATACTG  1093

seq1  TTGATTTTCCTATGAGGTTGCTGTCCC  1126
      |||| || ||||||  | |||||||||
seq2  TTGA-TTCCCTATGGAGGTGCTGTCCC  1119