BAC Information

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BAC

Clone NameB6Ng01-134P17
Chromosome19 (Build37)
Map Location 52,732,105 - 52,733,291
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042928, LOC668536, LOC100042936, Ins1
Downstream geneLOC100043450, Xpnpep1, LOC668545, LOC674277, Add3, 1700001K23Rik, Mxi1, Smndc1, Dusp5, LOC100043462, Smc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134P17.bB6Ng01-134P17.g
ACCDH935145DH935146
length1,1901,102
definitionDH935145|Mus musculus domesticus DNA, BAC clone: B6Ng01-134P17, 5' end.DH935146|Mus musculus domesticus DNA, BAC clone: B6Ng01-134P17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgactccagggcaccagaaccctgttacaaccaaagatagctc
aggttccgatgcattgtcagctggtctgactctctcttgtgatgttgaat
ggcttctagctccaaatgtcacaatatagagggaaagtcctgtgctcata
acaaagtagctgctgacaaagtccccatcaagatggggcaacatctcaat
ttgtcagctcaaggatgtgcataaagtgacttgtaaagggttctgggagc
agacagaggatcctttgaatacacaaagcaaagcaagagggtattttcta
gtctgtagtaagacatgtgtaccgtgctttgtgttggggaatgttggcga
tggcacagatccatggatctctcatagattgtgctcgggatcacggaaac
gaataaacaaaccatcttgtgatcacatcctttgccatgtagtctgagag
cactggggcatgagactgccaaagatgaatccacattttaaatctgaaga
cccatgggggaatgaaataaggaagataatttcttttaccaccactcaag
gttgagcatgcctatgctgaaattagcttgtaatggctgaattagaagtg
tctgaatatttagtacagtggaaatatgtgaagataactcagtggagaca
tttaaatatataaaaggaaaactaaaataaaaattattaattgtttgtgc
caaagacaaaaactaattagcattttgcatttaaccttcttagtcctttg
gttaactacatgttgcaaatttggggaatattctacaatgttttatagca
tacttgttcatagaaagcattatgaacattttcatactatcacatgttct
cttaaatggtgatgttccatgtctgtcttgcttttctaacttgttcagtc
aatgtcctattattagatttcctgagcttctaatattatctttgctcaga
tgtatttgtgtgtttcaataattatttctcagatgcattccttagtaaaa
taatgcagcatataattgaataatcactttctagctttggtagttactgc
tgtcaggaaaaccctatactctctatccctcaaaggggaaagaagatagt
ttacactgaagctatatgagtgaacatgcccaggacatgggagctaactt
cagtctattctgacaacaaggttatattataaacaaaggt
gaattctttgtttagctctgtactccattttttgatagggttatttggtt
ttctggagtccaactccttgagttctttatatatattggatatttggccc
ccattggatttaggattcttaaagatcttttcccaatctgttggtggcct
ttttatcttatagacagtgtcctttgccttacagaggctttgcaatttta
tgaggtcccctttgttgattcttcatcttatagcacaagccattgctgct
ctgttcaggaaattttcccctgtgcccatatctttgaggctcttccccac
tttctcctctataagtttcagtgtctctgattttatatggagttccttga
tccacttagacttgagctttgtacaatgagataagaatggatcaatttgc
attcttctacatgctaatcgacagttgagccagcaccatttgttgaaaat
gctgtctttcttccactggttggttttagtccttttgtcaaatatcaagt
gaccataggtgtgtgggttcatttatgggtcttcaattctattccattga
tctctctgtctgtagctgtaccagtaccatgcagatttttatcacaattg
ctctgtagtaaagctttaggtcaggcatggtgattccaccagagggtctt
ttatccttgagaagagtttttgctatcctagggttttttttttcttattc
cagatgaatttgcattttgccatatctaactctgtgaagaattgagttgg
aattttgatggggattgcattgaaagtgtagattgctttcggcaagatag
ccatttttactatattaatcctgccaatccaatgagcatgggagatcttt
ccatattctgagatcttctttgatttctttcttcagagacttgaagtttt
atcatacagatctttcccttccttagtagagtcacacaaggcattttata
ttatttgtgactattatgaaagtgtgcttccatttctttctcagctgttt
atcctttgtgtagagacgcactgatttatttgagttatttaaacagctac
ttgttgagttgttcagattagagttctgggggggaatttggagctcctta
at
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_52732105_52733291
seq2: B6Ng01-134P17.b_47_1236

seq1  GAATTCTTGACTCCAGGGCACCAGAACCCTGTTACAACCAAAGATAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGACTCCAGGGCACCAGAACCCTGTTACAACCAAAGATAGCTC  50

seq1  AGGTTCCGATGCATTGTCAGCTGGTCTGACTCTCTCTTGTGATGTTGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCGATGCATTGTCAGCTGGTCTGACTCTCTCTTGTGATGTTGAAT  100

seq1  GGCTTCTAGCTCCAAATGTCACAATATAGAGGGAAAGTCCTGTGCTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTAGCTCCAAATGTCACAATATAGAGGGAAAGTCCTGTGCTCATA  150

seq1  ACAAAGTAGCTGCTGACAAAGTCCCCATCAAGATGGGGCAACATCTCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTAGCTGCTGACAAAGTCCCCATCAAGATGGGGCAACATCTCAAT  200

seq1  TTGTCAGCTCAAGGATGTGCATAAAGTGACTTGTAAAGGGTTCTGGGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGCTCAAGGATGTGCATAAAGTGACTTGTAAAGGGTTCTGGGAGC  250

seq1  AGACAGAGGATCCTTTGAATACACAAAGCAAAGCAAGAGGGTATTTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGGATCCTTTGAATACACAAAGCAAAGCAAGAGGGTATTTTCTA  300

seq1  GTCTGTAGTAAGACATGTGTACCGTGCTTTGTGTTGGGGAATGTTGGCGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTAGTAAGACATGTGTACCGTGCTTTGTGTTGGGGAATGTTGGCGA  350

seq1  TGGCACAGATCCATGGATCTCTCATAGATTGTGCTCGGGATCACGGAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACAGATCCATGGATCTCTCATAGATTGTGCTCGGGATCACGGAAAC  400

seq1  GAATAAACAAACCATCTTGTGATCACATCCTTTGCCATGTAGTCTGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAACAAACCATCTTGTGATCACATCCTTTGCCATGTAGTCTGAGAG  450

seq1  CACTGGGGCATGAGACTGCCAAAGATGAATCCACATTTTAAATCTGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGGCATGAGACTGCCAAAGATGAATCCACATTTTAAATCTGAAGA  500

seq1  CCCATGGGGGAATGAAATAAGGAAGATAATTTCTTTTACCACCACTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGGGGAATGAAATAAGGAAGATAATTTCTTTTACCACCACTCAAG  550

seq1  GTTGAGCATGCCTATGCTGAAATTAGCTTGTAATGGCTGAATTAGAAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCATGCCTATGCTGAAATTAGCTTGTAATGGCTGAATTAGAAGTG  600

seq1  TCTGAATATTTAGTACAGTGGAAATATGTGAAGATAACTCAGTGGAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATATTTAGTACAGTGGAAATATGTGAAGATAACTCAGTGGAGACA  650

seq1  TTTAAATATATAAAAGGAAAACTAAAATAAAAATTATTAATTGTTTGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATATATAAAAGGAAAACTAAAATAAAAATTATTAATTGTTTGTGC  700

seq1  CAAAGACAAAAACTAATTAGCATTTTGCATTTAACCTTCTTAGTCCTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACAAAAACTAATTAGCATTTTGCATTTAACCTTCTTAGTCCTTTG  750

seq1  GTTAACTACATGTTGCAAATTTGGGGAATATTCTACAATGTTTTATAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTACATGTTGCAAATTTGGGGAATATTCTACAATGTTTTATAGCA  800

seq1  TACTTGTTCATAGAAAGCATTATGAACATTTTCATACTATCACATGTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTTCATAGAAAGCATTATGAACATTTTCATACTATCACATGTTCT  850

seq1  CTTAAATGGTGATGTTCCATGTCTGTCTTGCTTTTCTAACTTGTTCAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATGGTGATGTTCCATGTCTGTCTTGCTTTTCTAACTTGTTCAGTC  900

seq1  AATGTCCTATTATTAGATTTCCTGAGCTTTCTAATATTATCTTTGCTCAG  950
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AATGTCCTATTATTAGATTTCCTGAGC-TTCTAATATTATCTTTGCTCAG  949

seq1  ATGTATTTGTGTGTTTCAATAATTATTTCTCAGGATGCATTCCTTAGTAA  1000
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATGTATTTGTGTGTTTCAATAATTATTTCTCA-GATGCATTCCTTAGTAA  998

seq1  AATAATGCAGCATATAAATGAATAATCACTTTCTAGCTTTGGGTAGTTAC  1050
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  AATAATGCAGCATATAATTGAATAATCACTTTCTAGCTTT-GGTAGTTAC  1047

seq1  TGCTGTCAAGAAAACCCTATAACTCTCTTATCCCTCAAAGGGGAGAAGAG  1100
      |||||||| ||||||||||| |||||| |||||||||||||||| |  ||
seq2  TGCTGTCAGGAAAACCCTAT-ACTCTC-TATCCCTCAAAGGGGAAAGAAG  1095

seq1  ATAGTTTACACTGAAGCCAAATATGAGTGACCATGGCCCAGGAACAT-GG  1149
      |||||||||||||||||   |||||||||| ||| ||||||| |||| ||
seq2  ATAGTTTACACTGAAGC--TATATGAGTGAACAT-GCCCAGG-ACATGGG  1141

seq1  AGCTAACTCTCAATTCTATATTCTGACA---------------CAACAAA  1184
      |||||||| |||    | ||||||||||                ||||||
seq2  AGCTAACT-TCA---GTCTATTCTGACAACAAGGTTATATTATAAACAAA  1187

seq1  GGT  1187
      |||
seq2  GGT  1190