BAC Information

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BAC

Clone NameB6Ng01-135J13
Chromosome19 (Build37)
Map Location 14,932,336 - 15,134,006
singlet/doubletdoublet
Overlap geneEG433225
Upstream geneOlfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
Downstream geneEG635497, Pomc-ps1, LOC667482, Psat1, LOC100041424, Cep78, LOC100042048
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135J13.bB6Ng01-135J13.g
ACCDH935593DH935594
length1,214898
definitionDH935593|Mus musculus domesticus DNA, BAC clone: B6Ng01-135J13, 5' end.DH935594|Mus musculus domesticus DNA, BAC clone: B6Ng01-135J13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,932,336 - 14,933,534)(15,133,471 - 15,134,006)
sequence
gaattctttcttactggggactcattttcagtgagctactatagcagtca
cctatgcctgtggaatacactggttttacgctatattctgtcatgcaaaa
tacttgggccaaagaaatattggaatggatattgaagactctggaatagc
attggctgagaaaagaggggggtgtttcatggataaagtactactggcta
gtgtcttcaaagtacactatatcctgtgttgtttcctctcatagctgaaa
tacacagaccagtggtcaagaggtagagatgagaggagctattttatgta
attcattagttaaattggatttctatttactggcagtcttgggtttctaa
catataagtcttttcattttcctctcaaaaagatctatccttctaccaga
tgatacaaaggtcctgttgacctaaaaccaagaaatggcaactgcccatc
gaatgtttcacgtcattgaatcaaaggagatgagtcagtggaatggctgg
ggaaagttttattctgaatatttgtttgtatccatggaaggatgagtata
cttgactttatgctgttctctagaattgattccatgtgcatcaaaatatg
tctatggaaaaaaacagaattcagatccagcaagactatcactagttttc
cgttttggaatgaagatttgagtcatactctaggtaaagaataaacaaat
gacatgtagatactaaagcccataagttatgttaatgtcagcttacatgt
taaatatgaggaatgtttaatttccctcataactttaaaaatcaatatga
gagatcaatatttcctctttgcctttttgaaggatttcttgaacaatgtt
ggggtgagcacagatcattgacctagattgtaaagatgtcacacattatc
taggtagatgagtgatttcagggatgtcagtaggaactctgtcctatcat
ggagaatcctctgagtttccgactcagaaatgacacaggcccagaccttt
gtgaacatcaaatcattgcctcactcactggcaatgcacaggatggattt
agttcattagaacttcttccttttatagagatttgttgtgggtagacgaa
gtaagaacacacattcaacctgatatgatgatagacttcaggcaggggga
catggtaacagctcgtgtgaatatttcccctgctatgtaattaccatatt
ctctctccctctgt
gaattcctgctttaatttttttgtttttttttatttttttatttttaagt
taatttcagtttggcttttctttattgattctatttctttgttaaattct
actttcatgtattgaattgttttcactgtttgaatcaacggtttctgttt
tcacagacatcattaggcattttccatatcctctttaaaattcttgaaca
cattcattttttttatttatttttattacatattttcctcaattacattt
ccaatgctatcccaatagtcccccataccctcccccccacttctctaccc
actcattcccattttttttttttttttttttttttggccctggcgttccc
ctgtactggggcatatacagtttgcgtgtccaatgggcctctctttccag
tgatggccgactaggccatcttttgatacatatgcagctagagacacgag
ctccggggtactggttagttcataatgttgttgaacacattcataattgc
tattttaatgtccatgtcttgtgcttcagctaaattatttttctcagaga
ctatgataatagggctgctggtttctggagaagtcataatatctttttta
agttatgtttatggttttttttttcttttttgctaggctacagatacctg
agatttggtttttcttttggtgtagatatctggtgttgcttttatttgta
ggtacttcattctttggttgttgttctcatagtctaggccctaaccaaat
gtgaaggttgaggggtccctgatagagagaatttttgaagttcctgccac
atgtagtggcaaagggatccaaacttcacaccaagttgcactgtggtaaa
aactggatctgcattggtgggaagtcacaaagccatggttgtggccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14932336_14933534
seq2: B6Ng01-135J13.b_67_1259

seq1  TCATTTTCAGTGAGCTACTATAGCAGTCACCTATGCCTGTGGAATACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCAGTGAGCTACTATAGCAGTCACCTATGCCTGTGGAATACACT  50

seq1  GGTTTTACGCTATATTCTGTCATGCAAAATACTTGGGCCAAAGAAATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTACGCTATATTCTGTCATGCAAAATACTTGGGCCAAAGAAATATT  100

seq1  GGAATGGATATTGAAGACTCTGGAATAGCATTGGCTGAGAAAAGAGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGGATATTGAAGACTCTGGAATAGCATTGGCTGAGAAAAGAGGGGG  150

seq1  GTGTTTCATGGATAAAGTACTACTGGCTAGTGTCTTCAAAGTACACTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCATGGATAAAGTACTACTGGCTAGTGTCTTCAAAGTACACTATA  200

seq1  TCCTGTGTTGTTTCCTCTCATAGCTGAAATACACAGACCAGTGGTCAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTTGTTTCCTCTCATAGCTGAAATACACAGACCAGTGGTCAAGA  250

seq1  GGTAGAGATGAGAGGAGCTATTTTATGTAATTCATTAGTTAAATTGGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGATGAGAGGAGCTATTTTATGTAATTCATTAGTTAAATTGGATT  300

seq1  TCTATTTACTGGCAGTCTTGGGTTTCTAACATATAAGTCTTTTCATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTACTGGCAGTCTTGGGTTTCTAACATATAAGTCTTTTCATTTTC  350

seq1  CTCTCAAAAAGATCTATCCTTCTACCAGATGATACAAAGGTCCTGTTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAAAAGATCTATCCTTCTACCAGATGATACAAAGGTCCTGTTGAC  400

seq1  CTAAAACCAAGAAATGGCAACTGCCCATCGAATGTTTCACGTCATTGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCAAGAAATGGCAACTGCCCATCGAATGTTTCACGTCATTGAAT  450

seq1  CAAAGGAGATGAGTCAGTGGAATGGCTGGGGAAAGTTTTATTCTGAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAGATGAGTCAGTGGAATGGCTGGGGAAAGTTTTATTCTGAATAT  500

seq1  TTGTTTGTATCCATGGAAGGATGAGTATACTTGACTTTATGCTGTTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTATCCATGGAAGGATGAGTATACTTGACTTTATGCTGTTCTCT  550

seq1  AGAATTGATTCCATGTGCATCAAAATATGTCTATGGAAAAAAACAGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGATTCCATGTGCATCAAAATATGTCTATGGAAAAAAACAGAATT  600

seq1  CAGATCCAGCAAGACTATCACTAGTTTTCCGTTTTGGAATGAAGATTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCAGCAAGACTATCACTAGTTTTCCGTTTTGGAATGAAGATTTGA  650

seq1  GTCATACTCTAGGTAAAGAATAAACAAATGACATGTAGATACTAAAGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATACTCTAGGTAAAGAATAAACAAATGACATGTAGATACTAAAGCCC  700

seq1  ATAAGTTATGTTAATGTCAGCTTACATGTTAAATATGAGGAATGTTTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTTATGTTAATGTCAGCTTACATGTTAAATATGAGGAATGTTTAAT  750

seq1  TTCCCTCATAACTTTAAAAATCAATATGAGAGATCAATATTTCCTCTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCATAACTTTAAAAATCAATATGAGAGATCAATATTTCCTCTTTG  800

seq1  CCTTTTTGAAGGATTTCTTGAACAATGTTGGGGTGAGCACAAGATCATTG  850
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCTTTTTGAAGGATTTCTTGAACAATGTTGGGGTGAGCAC-AGATCATTG  849

seq1  ACCTAGATTGTAAAGATGTCACACATTATCTAGGTAGATGAGTGATTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGATTGTAAAGATGTCACACATTATCTAGGTAGATGAGTGATTTCA  899

seq1  GGGATGTCAGTAGGAACTCTGTCCTAATCATGGAGAATCCTCTGAGTTTC  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGGATGTCAGTAGGAACTCTGTCCT-ATCATGGAGAATCCTCTGAGTTTC  948

seq1  CGACTCAGAAATGACACAGGCCCAGACCTTTGTGAACATCAAAATCATTG  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CGACTCAGAAATGACACAGGCCCAGACCTTTGTGAACATC-AAATCATTG  997

seq1  CCTCACTCACTGGCAATGCAACAGGGATGGATTTAGTTCATTAG-ACTTC  1049
      ||||||||||||||||||| ||| |||||||||||||||||||| |||||
seq2  CCTCACTCACTGGCAATGC-ACA-GGATGGATTTAGTTCATTAGAACTTC  1045

seq1  TTCCTTTTATAGA-TTTTGTTGTGGGTAGACAGAAGTAAGAACACACATA  1098
      |||||||||||||  |||||||||||||||| ||||||||||||||||| 
seq2  TTCCTTTTATAGAGATTTGTTGTGGGTAGAC-GAAGTAAGAACACACATT  1094

seq1  CAA-CTGATATGATGGATAGGACTTCAGGCA-GGGGACATGGTGAACAGG  1146
      ||| |||||||||| |||| ||||||||||| ||||||||||| ||||| 
seq2  CAACCTGATATGAT-GATA-GACTTCAGGCAGGGGGACATGGT-AACAGC  1141

seq1  TC-TGTGCAGATCTTCACTGCACTAGGAAATTTTACTTATCTCTCTCCCT  1195
      || |||| | || | | |||  ||| | ||||    |  |||||||||||
seq2  TCGTGTGAATATTTCCCCTG--CTATGTAATTACCATATTCTCTCTCCCT  1189

seq1  CTGT  1199
      ||||
seq2  CTGT  1193

seq1: chr19_15133471_15134006
seq2: B6Ng01-135J13.g_432_966 (reverse)

seq1  TAGGCCAACAACCATGGCTTTGTGACTTCCCACCAACTGCAGATCCAGTC  50
      |||||| ||||||||||||||||||||||||||||| |||||||||||| 
seq2  TAGGCC-ACAACCATGGCTTTGTGACTTCCCACCAA-TGCAGATCCAGTT  48

seq1  TCTACCACAGTTGCAACTTGGCTGTG-AGTTTGGATCCCTCTGCCACTAC  99
      | |||||||| |||||||||| |||| ||||||||||||| |||||||||
seq2  TTTACCACAG-TGCAACTTGG-TGTGAAGTTTGGATCCCTTTGCCACTAC  96

seq1  ATGTGGCAGGAAC-TCAAAAATTCTCTCTATCAGGGACCCCTCAACCTTC  148
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCAGGAACTTCAAAAATTCTCTCTATCAGGGACCCCTCAACCTTC  146

seq1  ACATTTGGTTAGGGCCTAGACTATGAGAACAACAACCAAAGAATGAAGTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGGTTAGGGCCTAGACTATGAGAACAACAACCAAAGAATGAAGTA  196

seq1  CCTACAAATAAAAGCAACACCAGATATCTACACC-AAAGAAAAACCAAAT  247
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCTACAAATAAAAGCAACACCAGATATCTACACCAAAAGAAAAACCAAAT  246

seq1  CTCAGGTATCTGTAGCCTAGCAAAAAAGAAAAAAAAAACCATAAACATAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTATCTGTAGCCTAGCAAAAAAGAAAAAAAAAACCATAAACATAA  296

seq1  CTTAAAAAAGATATTATGACTTCTCCAGAAACCAGCAGCCCTATTATCAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAAAGATATTATGACTTCTCCAGAAACCAGCAGCCCTATTATCAT  346

seq1  AGTCTCTGAGAAAAATAATTTAGCTGAAGCACAAGACATGGACATTAAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTGAGAAAAATAATTTAGCTGAAGCACAAGACATGGACATTAAAA  396

seq1  TAGCAATTATGAATGTGTTCAACAACATTATGAACTAACCAGTACCCCGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATTATGAATGTGTTCAACAACATTATGAACTAACCAGTACCCCGG  446

seq1  AGCTCGTGTCTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCGTGTCTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCAT  496

seq1  CACTGGAAAGAGAGGCCCATTGGACACGCAAACTGTATA  536
      |||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAAGAGAGGCCCATTGGACACGCAAACTGTATA  535