BAC Information

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BAC

Clone NameB6Ng01-137J14
Chromosome19 (Build37)
Map Location 37,488,684 - 37,489,652
singlet/doubletsinglet
Overlap geneKif11
Upstream genePcgf5, Hectd2, LOC668215, Ppp1r3c, Tnks2, Fgfbp3, Btaf1, Cpeb3, March5, LOC668230, Ide, LOC100043010, EG667490, LOC631069
Downstream geneHhex, Exoc6, Cyp26c1, Cyp26a1, LOC668248, LOC668251, LOC209281, Fer1l3, Cep55, Gpr120, Rbp4, Pde6c, 5730455O13Rik, Lgi1, Tmem20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137J14.b
ACCDH937078
length970
definitionDH937078|Mus musculus domesticus DNA, BAC clone: B6Ng01-137J14, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactgtatacagtgttagatactctttgaacctgagcctgcttt
tgcctacagaaatttaccatcttgctgtaataaaatttaaatatggaaaa
tttagaataccagaataattcttgtttagtctttgctgtcctcctgtcag
tggtgtattcctagaaatctgggcacaatagaataatagttcataaacag
tcagacagctggctttattaagaaaagacagttttaaagcctggtatagc
ttaagagcatgcatataaacaagctagataatctgaatatttatgaaatt
ttataatttattttccttgagactgaggaaagaaaattgtcacttggaga
ctatcttgggttacatagcaagactgatgaaagagaaaaacataaattgt
tgggtgtggtggcaacactttctgacagtactctggaggaattggtagaa
tgattaggagttcaaggtcatcttttgctgctgagtgagcctgatcctac
cctgggttacaagagctcctgtctcagaaaaccaaacccaacccaaaagc
actcaaaacaaataaaattgaccgactgtttagtcaacagtgtgtctcaa
aggatgtttcaataccaaaatattagatgaggataaaagctaagtctagt
ttaatgcaaactcactgcattgtacatttccccacgtccatcttatttaa
atgactgccaacatttaaaaatcaccagtttttagagatcagaaatggca
aagatcgataaactaccatgatcactaaacttacccattaacagtttatt
aagttattaataattaacagttattaataattgattcctcattgcactgt
aaaatcatttaattatatacttttttgaatgtttttggaacatataaatt
acatctcaaactttcttttaaaattagtcattgtaaagagtttcctacta
aatatattggagccgggcgt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_37488684_37489652
seq2: B6Ng01-137J14.b_45_1014

seq1  GAATTCAACTGTATACAGTGTTAGATACTCTTTGAACCTGAGCCTGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGTATACAGTGTTAGATACTCTTTGAACCTGAGCCTGCTTT  50

seq1  TGCCTACAGAAATTTACCATCTTGCTGTAATAAAATTTAAATATGGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACAGAAATTTACCATCTTGCTGTAATAAAATTTAAATATGGAAAA  100

seq1  TTTAGAATACCAGAATAATTCTTGTTTAGTCTTTGCTGTCCTCCTGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAATACCAGAATAATTCTTGTTTAGTCTTTGCTGTCCTCCTGTCAG  150

seq1  TGGTGTATTCCTAGAAATCTGGGCACAATAGAATAATAGTTCATAAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTATTCCTAGAAATCTGGGCACAATAGAATAATAGTTCATAAACAG  200

seq1  TCAGACAGCTGGCTTTATTAAGAAAAGACAGTTTTAAAGCCTGGTATAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACAGCTGGCTTTATTAAGAAAAGACAGTTTTAAAGCCTGGTATAGC  250

seq1  TTAAGAGCATGCATATAAACAAGCTAGATAATCTGAATATTTATGAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGCATGCATATAAACAAGCTAGATAATCTGAATATTTATGAAATT  300

seq1  TTATAATTTATTTTCCTTGAGACTGAGGAAAGAAAATTGTCACTTGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTTATTTTCCTTGAGACTGAGGAAAGAAAATTGTCACTTGGAGA  350

seq1  CTATCTTGGGTTACATAGCAAGACTGATGAAAGAGAAAAACATAAATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTGGGTTACATAGCAAGACTGATGAAAGAGAAAAACATAAATTGT  400

seq1  TGGGTGTGGTGGCAACACTTTCTGACAGTACTCTGGAGGAATTGGTAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTGGTGGCAACACTTTCTGACAGTACTCTGGAGGAATTGGTAGAA  450

seq1  TGATTAGGAGTTCAAGGTCATCTTTTGCTGCTGAGTGAGCCTGATCCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAGGAGTTCAAGGTCATCTTTTGCTGCTGAGTGAGCCTGATCCTAC  500

seq1  CCTGGGTTACAAGAGCTCCTGTCTCAGAAAACCAAACCCAACCCAAAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTTACAAGAGCTCCTGTCTCAGAAAACCAAACCCAACCCAAAAGC  550

seq1  ACTCAAAACAAATAAAATTGACCGACTGTTTAGTCAACAGTGTGTCTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAACAAATAAAATTGACCGACTGTTTAGTCAACAGTGTGTCTCAA  600

seq1  AGGATGTTTCAATACCAAAATATTAGATGAGGATAAAAGCTAAGTCTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTTTCAATACCAAAATATTAGATGAGGATAAAAGCTAAGTCTAGT  650

seq1  TTAATGCAAACTCACTGCATTGTACATTTCCCCACGTCCATCTTATTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCAAACTCACTGCATTGTACATTTCCCCACGTCCATCTTATTTAA  700

seq1  ATGACTGCCAACATTTAAAAATCACCAG-TTTTAGAGATCAGAAATGGCA  749
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATGACTGCCAACATTTAAAAATCACCAGTTTTTAGAGATCAGAAATGGCA  750

seq1  AAGATCGATAAACTACCATGATCACTAAACTTACCCATTAACAGTTTATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCGATAAACTACCATGATCACTAAACTTACCCATTAACAGTTTATT  800

seq1  AAGTTATTAATAATTAACAGTTATTAATAATTGATTCCTCATTGCACTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATTAATAATTAACAGTTATTAATAATTGATTCCTCATTGCACTGT  850

seq1  AAAATCATTTAATTATATACTTTTTTGAATGTTTTTGGAACATATAAATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATTTAATTATATACTTTTTTGAATGTTTTTGGAACATATAAATT  900

seq1  ACATCTCAAAACTTTCTTTTAAAA-TAGTCATTGTAAAGAGTTT-CTACT  947
      ||||||| |||||||||||||||| ||||||||||||||||||| |||||
seq2  ACATCTC-AAACTTTCTTTTAAAATTAGTCATTGTAAAGAGTTTCCTACT  949

seq1  AAATAATATTGGAGCCGGGCGT  969
      |||| |||||||||||||||||
seq2  AAAT-ATATTGGAGCCGGGCGT  970