BAC Information

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BAC

Clone NameB6Ng01-142A24
Chromosome19 (Build37)
Map Location 30,219,443 - 30,358,755
singlet/doubletdoublet
Overlap geneGldc, EG625917, Mbl2
Upstream geneLOC433238, Jak2, Insl6, Rln1, 5033414D02Rik, Cd274, Pdcd1lg2, C030046E11Rik, D19Wsu12e, Mlana, 9930021J03Rik, Ranbp6, Il33, Trpd52l3, Uhrf2
Downstream geneLOC100042088, LOC668020, EG546723, Dkk1, Prkg1, LOC625995, Cstf2t, 8430431K14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142A24.bB6Ng01-142A24.g
ACCDH940354DH940355
length8921,046
definitionDH940354|Mus musculus domesticus DNA, BAC clone: B6Ng01-142A24, 5' end.DH940355|Mus musculus domesticus DNA, BAC clone: B6Ng01-142A24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,219,443 - 30,220,333)(30,357,695 - 30,358,755)
sequence
gaattcattccctagcacccacgctgggcagctcggaactgcctggagct
ccagctttggggaatccaatgccctgttctggtttccttgggtttctagg
cacatatggtgtacacacacgcacatacacaaaatgaaggagagaaaagg
aacagggaaggtcgtgatgacagtaagggggcgtgaagctttaccttgtc
acccccaccatccttccaggcatcatcctcaccaggttttctttgacagc
aaagaaggccgcatgcggtcccccatagcccagtggcactccaaatctct
gggagttgcccagggcaatgtccactccaaactctccaggtggcctcaaa
atacacagagctaaaaggtcagtagcacagcaggtcaggctctggggagg
aaatggagaagaggtcaaggttatcaccttatcctgactgtgcaggagtt
gtctccactacaaacaggctggctgggaggggcattgctgggaactccat
ttgattatgcattcatatggaagaatatttaccagggatcagtgagtgac
agtaacaaagaggaaggagtaggggaagaagatgtcaccattccatgtga
taaaagacagacagatatgggaactgggacacagcgtcctgaacctcagc
agggggcttacctaccccagtctgatgggctctgtctacaagttctgtga
agtcctccaccttcccctcagtgtctgggtactggaacagcaccccacag
acgtctttgccactgaaatccatttcgtggggtaacttcagctcgacaag
cacccccctatatctgaaagtacaaggaaaattggtcctttttattatgg
tgggtgagtgcatgcatgcccggtgtgtctgggtgtggtctc
gaattcttcgaggttctaagagatgaggtaggagaagtgactttttgcca
aacgatgagcttagagttgctctaatttgaaagactggaaaatttttaga
aaatgggggacctgatcaaactcaggctgtggaaaatacatttacttatt
cgtaacctttcatggctagctcaatatttaagttctcagagaccttgaat
gccccctggcagctggaactgcccttcaccaaggtcacacttgcaatgtt
tcccccagaatgacaatgggctgcttagaataagagaccaactgacaaag
ccaaaaacaactcaaggtgaaattaagttttaaaaactaaaaaatgttac
ctcagtatcatccaaataaggttcgacctctgttcaggcttaaagggaga
catcggtcaaagcaatttcagtttgatcactttgagttaagttgttccct
ttatgtctctaaaaggtcttcctttaccatacatcctgacatcagcacac
atgaattctgtatgataaaataagaaacctcagaaggacactatgcattt
aggcatgtaaaatgctcactgcaaaacagctgattaaggtccacgtttca
attcatctctctttagaaatctgttatatttaaaagagaaggctttggag
gtatttccatagtgagttgggaatgagacttgatacctctggggatatta
aaaagctcaactcctgagttctctgtttttcttagttgtacacagctcca
ttaaccacaagtagtctttttattgtagcttttgtgttgttttacaagag
tcagttggccaccagagagtcacccaggagtccgcagttcttgaccgtcg
catgtaacgtcagctctcgaggggagggcttcacaagtagtgtgacaagt
tgctttgtggaaatgtcatgcggtggatttcaaggaggctgtgcttcaca
accccaccccaccgctgcaatcattctgactacattcagctgcagacgct
gagatttagataagaacaaaagaaaggtcggttattcagcatcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_30219443_30220333
seq2: B6Ng01-142A24.b_29_920

seq1  GAATTCATTCCCTAGCACCCACGCTGGGCAGCTCGGAACTGCCTGGAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCCTAGCACCCACGCTGGGCAGCTCGGAACTGCCTGGAGCT  50

seq1  CCAGCTTTGGGGAATCCAATGCCCTGTTCTGGTTTCCTTGGGTTTCTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTTGGGGAATCCAATGCCCTGTTCTGGTTTCCTTGGGTTTCTAGG  100

seq1  CACATATGGTGTACACACACGCACATACACAAAATGAAGGAGAGAAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATGGTGTACACACACGCACATACACAAAATGAAGGAGAGAAAAGG  150

seq1  AACAGGGAAGGTCGTGATGACAGTAAGGGGGCGTGAAGCTTTACCTTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGAAGGTCGTGATGACAGTAAGGGGGCGTGAAGCTTTACCTTGTC  200

seq1  ACCCCCACCATCCTTCCAGGCATCATCCTCACCAGGTTTTCTTTGACAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCACCATCCTTCCAGGCATCATCCTCACCAGGTTTTCTTTGACAGC  250

seq1  AAAGAAGGCCGCATGCGGTCCCCCATAGCCCAGTGGCACTCCAAATCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGGCCGCATGCGGTCCCCCATAGCCCAGTGGCACTCCAAATCTCT  300

seq1  GGGAGTTGCCCAGGGCAATGTCCACTCCAAACTCTCCAGGTGGCCTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTGCCCAGGGCAATGTCCACTCCAAACTCTCCAGGTGGCCTCAAA  350

seq1  ATACACAGAGCTAAAAGGTCAGTAGCACAGCAGGTCAGGCTCTGGGGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAGAGCTAAAAGGTCAGTAGCACAGCAGGTCAGGCTCTGGGGAGG  400

seq1  AAATGGAGAAGAGGTCAAGGTTATCACCTTATCCTGACTGTGCAGGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGAAGAGGTCAAGGTTATCACCTTATCCTGACTGTGCAGGAGTT  450

seq1  GTCTCCACTACAAACAGGCTGGCTGGGAGGGGCATTGCTGGGAACTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCACTACAAACAGGCTGGCTGGGAGGGGCATTGCTGGGAACTCCAT  500

seq1  TTGATTATGCATTCATATGGAAGAATATTTACCAGGGATCAGTGAGTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTATGCATTCATATGGAAGAATATTTACCAGGGATCAGTGAGTGAC  550

seq1  AGTAACAAAGAGGAAGGAGTAGGGGAAGAAGATGTCACCATTCCATGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACAAAGAGGAAGGAGTAGGGGAAGAAGATGTCACCATTCCATGTGA  600

seq1  TAAAAGACAGACAGATATGGGAACTGGGACACAGCGTCCTGAACCTCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGACAGACAGATATGGGAACTGGGACACAGCGTCCTGAACCTCAGC  650

seq1  AGGGGGCTTACCTACCCCAGTCTGATGGGCTCTGTCTACAAGTTCTGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGCTTACCTACCCCAGTCTGATGGGCTCTGTCTACAAGTTCTGTGA  700

seq1  AGTCCTCCACCTTCCCCTCAGTGTCTGGGTACTGGAACAGCACCCCACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCCACCTTCCCCTCAGTGTCTGGGTACTGGAACAGCACCCCACAG  750

seq1  ACGTCTTTGCCACTGAAATCCATTTCGTGGGGTAACTTCAGCTCGACAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTTTGCCACTGAAATCCATTTCGTGGGGTAACTTCAGCTCGACAAG  800

seq1  CACCCCCCTATATCTGAAAGTACAAGGGAAAATTGGTCCTTTTTATTATG  850
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CACCCCCCTATATCTGAAAGTACAA-GGAAAATTGGTCCTTTTTATTATG  849

seq1  GTGTGTGAGTGCATGCATGCCC-GTGTGTCTGTGTGT-GTCTC  891
      ||| |||||||||||||||||| ||||||||| |||| |||||
seq2  GTGGGTGAGTGCATGCATGCCCGGTGTGTCTGGGTGTGGTCTC  892

seq1: chr19_30357695_30358755
seq2: B6Ng01-142A24.g_62_1107 (reverse)

seq1  AAAGATTGCTGAATAACGAACACTTTTCTTTTTGTTTCTTATCTATATTC  50
      ||||| |||||||||||    || ||||||||   |||||||||| |   
seq2  AAAGA-TGCTGAATAAC--CGACCTTTCTTTT--GTTCTTATCTAAA---  42

seq1  TTTCAGCGGTTCTGCAGCTGAATGTAGTCAGAATGATTGCAGCGGTGGGG  100
      | ||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCG--TCTGCAGCTGAATGTAGTCAGAATGATTGCAGCGGTGGGG  90

seq1  TGGGGTTGGTGGAAAGGCACAGGCCTCTTTGAAATCCACCGCATGACATT  150
      ||||||| |||   | ||||| ||||| ||||||||||||||||||||||
seq2  TGGGGTT-GTG---AAGCACA-GCCTCCTTGAAATCCACCGCATGACATT  135

seq1  TCCACAAAGCAACTTGTCACACTACTTGTGAAGCCCT-CCCTCGAGGAGC  199
      ||||||||||||||||||||||||||||||||||||| ||||||| ||||
seq2  TCCACAAAGCAACTTGTCACACTACTTGTGAAGCCCTCCCCTCGA-GAGC  184

seq1  TGACGTTACATGCGACGGTCAAGAACTGCGGACTCCTGGGTGACTCTCTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTTACATGCGACGGTCAAGAACTGCGGACTCCTGGGTGACTCTCTG  234

seq1  GTGGCCAACTGACTCTTGTAAAACAACACAAAAGCTACAATAAAAAGACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCAACTGACTCTTGTAAAACAACACAAAAGCTACAATAAAAAGACT  284

seq1  ACTTGTGGTTAATGGAGCTGTGTACAACTAAGAAAAACAGAGAACTCAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGGTTAATGGAGCTGTGTACAACTAAGAAAAACAGAGAACTCAGG  334

seq1  AGTTGAGCTTTTTAATATCCCCAGAGGTATCAAGTCTCATTCCCAACTCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAGCTTTTTAATATCCCCAGAGGTATCAAGTCTCATTCCCAACTCA  384

seq1  CTATGGAAATACCTCCAAAGCCTTCTCTTTTAAATATAACAGATTTCTAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGAAATACCTCCAAAGCCTTCTCTTTTAAATATAACAGATTTCTAA  434

seq1  AGAGAGATGAATTGAAACGTGGACCTTAATCAGCTGTTTTGCAGTGAGCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATGAATTGAAACGTGGACCTTAATCAGCTGTTTTGCAGTGAGCA  484

seq1  TTTTACATGCCTAAATGCATAGTGTCCTTCTGAGGTTTCTTATTTTATCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATGCCTAAATGCATAGTGTCCTTCTGAGGTTTCTTATTTTATCA  534

seq1  TACAGAATTCATGTGTGCTGATGTCAGGATGTATGGTAAAGGAAGACCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAATTCATGTGTGCTGATGTCAGGATGTATGGTAAAGGAAGACCTT  584

seq1  TTAGAGACATAAAGGGAACAACTTAACTCAAAGTGATCAAACTGAAATTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGACATAAAGGGAACAACTTAACTCAAAGTGATCAAACTGAAATTG  634

seq1  CTTTGACCGATGTCTCCCTTTAAGCCTGAACAGAGGTCGAACCTTATTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACCGATGTCTCCCTTTAAGCCTGAACAGAGGTCGAACCTTATTTG  684

seq1  GATGATACTGAGGTAACATTTTTTAGTTTTTAAAACTTAATTTCACCTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATACTGAGGTAACATTTTTTAGTTTTTAAAACTTAATTTCACCTTG  734

seq1  AGTTGTTTTTGGCTTTGTCAGTTGGTCTCTTATTCTAAGCAGCCCATTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTTTTGGCTTTGTCAGTTGGTCTCTTATTCTAAGCAGCCCATTGT  784

seq1  CATTCTGGGGGAAACATTGCAAGTGTGACCTTGGTGAAGGGCAGTTCCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGGGGGAAACATTGCAAGTGTGACCTTGGTGAAGGGCAGTTCCAG  834

seq1  CTGCCAGGGGGCATTCAAGGTCTCTGAGAACTTAAATATTGAGCTAGCCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGGGGGCATTCAAGGTCTCTGAGAACTTAAATATTGAGCTAGCCA  884

seq1  TGAAAGGTTACGAATAAGTAAATGTATTTTCCACAGCCTGAGTTTGATCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGTTACGAATAAGTAAATGTATTTTCCACAGCCTGAGTTTGATCA  934

seq1  GGTCCCCCATTTTCTAAAAATTTTCCAGTCTTTCAAATTAGAGCAACTCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCCCATTTTCTAAAAATTTTCCAGTCTTTCAAATTAGAGCAACTCT  984

seq1  AAGCTCATCGTTTGGCAAAAAGTCACTTCTCCTACCTCATCTCTTAGAAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCATCGTTTGGCAAAAAGTCACTTCTCCTACCTCATCTCTTAGAAC  1034

seq1  CTCGAAGAATTC  1061
      ||||||||||||
seq2  CTCGAAGAATTC  1046