BAC Information

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BAC

Clone NameB6Ng01-143C23
Chromosome19 (Build37)
Map Location 32,023,503 - 32,121,265
singlet/doubletdoublet
Overlap gene1810073H04Rik, Asah2
Upstream genePrkg1, Cstf2t, 8430431K14Rik
Downstream geneEG668042, Sgms1, 2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143C23.bB6Ng01-143C23.g
ACCDH941188DH941189
length1,0621,062
definitionDH941188|Mus musculus domesticus DNA, BAC clone: B6Ng01-143C23, 5' end.DH941189|Mus musculus domesticus DNA, BAC clone: B6Ng01-143C23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,023,503 - 32,024,565)(32,120,173 - 32,121,265)
sequence
gaattctggaatctaaaatcaggccaaattccatccaatcaaagccaggg
aaatgtcaaccagagttgaatacctcataacctttaggttctcataagtc
tagctagacatctaaagttgagaaccccagctgaaacgaaaggctctgga
tttcctggattatgccttctttcgggttattgtgttcctaagaacaggaa
ctcccgagcttggcagcatatccaaaacacctaaagagctttcaatcagt
taaggccaagctcacaggccaaatatgtcagagagtcttggcatggggcc
tgacgtcagtgttttgggaagattcctgtgtggtttgaaaaagcagcttg
gagtgggaatgttagagtctttgtagatccactccgcttctttcattctg
tcctttctaattcagtctgcaccaaatacacaacacctatacattgtttt
agtcaaaaacaagtaagtggtcatgtggctgtcattatagtcatcaagca
catgctctgagcttgaacgaagttcatattggcttcaaactacttattaa
gacaaactttaaaaagaaaattcaccttcccttaaagtaattcttatatt
caaatttatactcaccataacctgttttttattcagagagagagagagag
agagagagagagagagagaattacattgacccacaaatgtcctctggcca
ggtaaatttctcctcagcctgaaaagacatttcaaattctacctgaggaa
aaccctcaaaaataaatagcgaagggctcactatatgttttctcaagata
gaaaaatgctgtggaagatggaaatccatttaacaggaaaaagatagtgg
cttcatacagataataccatcatcgcccactaaaagcatcagcaacataa
taccaaatgctacaaaaaaagaaacaaagtggggaagaaggataaccagt
gggatactacatgctactttccagagaaacataactataatgggctgctt
cctggggctatctaatatactactaatggatggatgatgctgctgctgct
gctgctgctgct
gaattcatcgctaggtggtataattatgtttgtcttcctctttcattgta
ataagacaccttggagggtcagacccactatatttctatcagtaagaaat
agtagatttcaaaagaggaatacagaagagtcctggttagagagacttgg
gcctgaaatttggcctcactgccctttagatttgtggaaaaatcaactct
tgtgtattagtgttgtcagctgaaaaaatggggttagaaataacaacttt
tgtggttatgaatatttaaaataacctaaagtacataaactacctagcca
tggctgtacttgcatgtagcaaggccctacagaatgatagcatccgcagt
catcatcattacacttgttactatgatgagcagcttggagggaagggcca
gctgaaagggaagtgggcagggcagaccagtgcttgattgagctcttcag
aagcccccatcttgctgagatgctataggattcttcttagttctctgttt
tgttttccttcaaggtcctgaagagactagagagtaaatatggctctctg
tatcgaagagacaatgttatcctgagtgccattcacacacactctggccc
agcagggtttttccaatatacactctatatactcgccagcgagggattca
gcaaccggacctttcagtacatagtctctgggatcatgaagggtaggtga
agaacaccctagcagatacagcttatgttctcacggatctttccgtttca
cccgcctttcttcctctttcccaatgtcaccagaagcccatctgtctctc
ttcagctcagacactatcaccaggaaatatagtggatgctacatgcccta
cctcagaggagggagactacctcagggactcagcgtggcaggcgtgataa
ggagtaaggagtactgtagggcagagaggcagtgctagtacagcttgtca
tcaggtcgtgaactctatttctcctgaggctagagcacctgcagcagatg
gtcactgcatgctagttgcaaaacatgacttttctgtaggctaacagata
gtatttgtgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32023503_32024565
seq2: B6Ng01-143C23.b_48_1109

seq1  GAATTCTGGAATCTAAAATCAGGCCAAATTCCATCCAATCAAAGCCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAATCTAAAATCAGGCCAAATTCCATCCAATCAAAGCCAGGG  50

seq1  AAATGTCAACCAGAGTTGAATACCTCATAACCTTTAGGTTCTCATAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCAACCAGAGTTGAATACCTCATAACCTTTAGGTTCTCATAAGTC  100

seq1  TAGCTAGACATCTAAAGTTGAGAACCCCAGCTGAAACGAAAGGCTCTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAGACATCTAAAGTTGAGAACCCCAGCTGAAACGAAAGGCTCTGGA  150

seq1  TTTCCTGGATTATGCCTTCTTTCGGGTTATTGTGTTCCTAAGAACAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGGATTATGCCTTCTTTCGGGTTATTGTGTTCCTAAGAACAGGAA  200

seq1  CTCCCGAGCTTGGCAGCATATCCAAAACACCTAAAGAGCTTTCAATCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGAGCTTGGCAGCATATCCAAAACACCTAAAGAGCTTTCAATCAGT  250

seq1  TAAGGCCAAGCTCACAGGCCAAATATGTCAGAGAGTCTTGGCATGGGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCCAAGCTCACAGGCCAAATATGTCAGAGAGTCTTGGCATGGGGCC  300

seq1  TGACGTCAGTGTTTTGGGAAGATTCCTGTGTGGTTTGAAAAAGCAGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTCAGTGTTTTGGGAAGATTCCTGTGTGGTTTGAAAAAGCAGCTTG  350

seq1  GAGTGGGAATGTTAGAGTCTTTGTAGATCCACTCCGCTTCTTTCATTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGAATGTTAGAGTCTTTGTAGATCCACTCCGCTTCTTTCATTCTG  400

seq1  TCCTTTCTAATTCAGTCTGCACCAAATACACAACACCTATACATTGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTAATTCAGTCTGCACCAAATACACAACACCTATACATTGTTTT  450

seq1  AGTCAAAAACAAGTAAGTGGTCATGTGGCTGTCATTATAGTCATCAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAAACAAGTAAGTGGTCATGTGGCTGTCATTATAGTCATCAAGCA  500

seq1  CATGCTCTGAGCTTGAACGAAGTTCATATTGGCTTCAAACTACTTATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCTGAGCTTGAACGAAGTTCATATTGGCTTCAAACTACTTATTAA  550

seq1  GACAAACTTTAAAAAGAAAATTCACCTTCCCTTAAAGTAATTCTTATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACTTTAAAAAGAAAATTCACCTTCCCTTAAAGTAATTCTTATATT  600

seq1  CAAATTTATACTCACCATAACCTG-TTTTTATTCAGAGAGAGAGAGAGAG  649
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAAATTTATACTCACCATAACCTGTTTTTTATTCAGAGAGAGAGAGAGAG  650

seq1  AGAGAGAGAGAGAGAGAGAATTACATTGACCCACAAATGTCCTCTGGCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAATTACATTGACCCACAAATGTCCTCTGGCCA  700

seq1  GGTAAATTTCTCCTCAGCCTGAAAAGACATTTCAAATTCTACCTGAGGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATTTCTCCTCAGCCTGAAAAGACATTTCAAATTCTACCTGAGGAA  750

seq1  AACCCTCAAAAATAAATAGCGAAGGGCTCACTATATGTTTTCTCAAGATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTCAAAAATAAATAGCGAAGGGCTCACTATATGTTTTCTCAAGATA  800

seq1  G-AAGATGCTGTGGAAGATTGAAATCCATTTAACAGG-AAAAGATAAGTG  847
      | || |||||||||||||| ||||||||||||||||| ||||||||   |
seq2  GAAAAATGCTGTGGAAGATGGAAATCCATTTAACAGGAAAAAGATAGTGG  850

seq1  CTTCATACAGATAATACCATCATCGCCCACTAAAAGCATCAGCAACATAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATACAGATAATACCATCATCGCCCACTAAAAGCATCAGCAACATAA  900

seq1  TACCAAATGCTAC-AAAAAAGAAACAAAGT-GTGAAGAA-GATTACCAGT  944
      ||||||||||||| |||||||||||||||| | |||||| ||| ||||||
seq2  TACCAAATGCTACAAAAAAAGAAACAAAGTGGGGAAGAAGGATAACCAGT  950

seq1  GGGATACTACATGCTTACTTTCCAGAGAAAACATAACTAATTAATGGCCT  994
      |||||||||||||| |||||||||||| |||||||||||  |||||| ||
seq2  GGGATACTACATGC-TACTTTCCAGAG-AAACATAACTA--TAATGGGCT  996

seq1  GCCTCCCTGTGGCTAATCT-ATATACTACTAAATGGATGGATGGATGCTG  1043
      | || |||| |||| |||| |||||||||| ||||||||||| |||||||
seq2  G-CTTCCTGGGGCT-ATCTAATATACTACT-AATGGATGGAT-GATGCTG  1042

seq1  CTGCTGCTGCTGCTGCTGCT  1063
      ||||||||||||||||||||
seq2  CTGCTGCTGCTGCTGCTGCT  1062

seq1: chr19_32120173_32121265
seq2: B6Ng01-143C23.g_68_1129 (reverse)

seq1  AGTCACAAAAATTACTATACTGTTTAGCTTACAGAAAAGTCATGTTTTTG  50
      |||||||||   |||||| ||| ||||| ||||||||||||||| |||||
seq2  AGTCACAAA---TACTAT-CTG-TTAGCCTACAGAAAAGTCATG-TTTTG  44

seq1  CAACTAGCCATGGCAGGTGACAATCTGCTGCAGGTGCTCTAGCCTCAGGG  100
      ||||||| ||| ||| ||||| ||||||||||||||||||||||||| ||
seq2  CAACTAG-CAT-GCA-GTGACCATCTGCTGCAGGTGCTCTAGCCTCA-GG  90

seq1  AGAAAATAGAGGTTCACGACCTGGATGACAAAGCTGTTACTTAGCACCTG  150
      || ||||||| ||||||||||| |||||| |||||| ||| ||||| |||
seq2  AG-AAATAGA-GTTCACGACCT-GATGAC-AAGCTG-TAC-TAGCA-CTG  133

seq1  GCCTTCTCCTTGCCCCTACAGTACTTCCTTTCCCTCCTTATCCACGCCCT  200
        | ||||  || ||||||||||| |||||   |||||||| |||| |||
seq2  --CCTCTC--TG-CCCTACAGTAC-TCCTT--ACTCCTTAT-CACG-CCT  173

seq1  GCCACCGCTGAGTCCCTGAGGTAGTCTCCCTCCTTCTGAGGTAGGGCATT  250
      |||| |||||||||||||||||||||||||||| |||||||||||||| |
seq2  GCCA-CGCTGAGTCCCTGAGGTAGTCTCCCTCC-TCTGAGGTAGGGCA-T  220

seq1  GTAGCATCCACTATAATTTCCTGGTGATTGGTGTCTGAGCTGAAGAGAGA  300
      |||||||||||||| |||||||||||| | ||||||||||||||||||||
seq2  GTAGCATCCACTAT-ATTTCCTGGTGA-TAGTGTCTGAGCTGAAGAGAGA  268

seq1  CAGATGGGCTTCTGGTGACATTGGGAAAGAGGAAGAAAGGCGGGTGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGGCTTCTGGTGACATTGGGAAAGAGGAAGAAAGGCGGGTGAAAC  318

seq1  GGAAAGATCCGTGAGAACATAAGCTGTATCTGCTAGGGTGTTCTTCACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGATCCGTGAGAACATAAGCTGTATCTGCTAGGGTGTTCTTCACCT  368

seq1  A-CCTTCATGATCCCAGAGACTATGTACTGAAAGGTCCGGTTGCTGAATC  449
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCATGATCCCAGAGACTATGTACTGAAAGGTCCGGTTGCTGAATC  418

seq1  CCTCGCTGGCGAGTATATAGAGTGTATATTGGAAAAACCCTGCTGGGCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGCTGGCGAGTATATAGAGTGTATATTGGAAAAACCCTGCTGGGCCA  468

seq1  GAGTGTGTGTGAATGGCACTCAGGATAACATTGTCTCTTCGATACAGAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGTGTGAATGGCACTCAGGATAACATTGTCTCTTCGATACAGAGA  518

seq1  GCCATATTTACTCTCTAGTCTCTTCAGGACCTTGAAGGAAAACAAAACAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATATTTACTCTCTAGTCTCTTCAGGACCTTGAAGGAAAACAAAACAG  568

seq1  AGAACTAAGAAGAATCCTATAGCATCTCAGCAAGATGGGGGCTTCTGAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTAAGAAGAATCCTATAGCATCTCAGCAAGATGGGGGCTTCTGAAG  618

seq1  AGCTCAATCAAGCACTGGTCTGCCCTGCCCACTTCCCTTTCAGCTGGCCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAATCAAGCACTGGTCTGCCCTGCCCACTTCCCTTTCAGCTGGCCC  668

seq1  TTCCCTCCAAGCTGCTCATCATAGTAACAAGTGTAATGATGATGACTGCG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCCAAGCTGCTCATCATAGTAACAAGTGTAATGATGATGACTGCG  718

seq1  GATGCTATCATTCTGTAGGGCCTTGCTACATGCAAGTACAGCCATGGCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTATCATTCTGTAGGGCCTTGCTACATGCAAGTACAGCCATGGCTA  768

seq1  GGTAGTTTATGTACTTTAGGTTATTTTAAATATTCATAACCACAAAAGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTTATGTACTTTAGGTTATTTTAAATATTCATAACCACAAAAGTT  818

seq1  GTTATTTCTAACCCCATTTTTTCAGCTGACAACACTAATACACAAGAGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTCTAACCCCATTTTTTCAGCTGACAACACTAATACACAAGAGTT  868

seq1  GATTTTTCCACAAATCTAAAGGGCAGTGAGGCCAAATTTCAGGCCCAAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTCCACAAATCTAAAGGGCAGTGAGGCCAAATTTCAGGCCCAAGT  918

seq1  CTCTCTAACCAGGACTCTTCTGTATTCCTCTTTTGAAATCTACTATTTCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTAACCAGGACTCTTCTGTATTCCTCTTTTGAAATCTACTATTTCT  968

seq1  TACTGATAGAAATATAGTGGGTCTGACCCTCCAAGGTGTCTTATTACAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGATAGAAATATAGTGGGTCTGACCCTCCAAGGTGTCTTATTACAAT  1018

seq1  GAAAGAGGAAGACAAACATAATTATACCACCTAGCGATGAATTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGGAAGACAAACATAATTATACCACCTAGCGATGAATTC  1062