BAC Information

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BAC

Clone NameB6Ng01-145O05
Chromosome19 (Build37)
Map Location 7,404,135 - 7,585,566
singlet/doubletdoublet
Overlap geneMark2, AI846148, EG665419, 2700081O15Rik, Rtn3, LOC100039547, 5730596K20Rik
Upstream geneRasgrp2, Nrxn2, Slc22a12, LOC629372, Rps6ka4, Ccdc88, Prdx5, 0610038D11Rik, Esrra, 1700019N12Rik, Kcnk4, Gpr137, Bad, Plcb3, Ppp1r14b, Fkbp2, Vegfb, Dnajc4, Nudt22, Trpt1, BC032204, Stip1, D930010J01Rik, Flrt1, Otub1, Cox8a, Nat11, Rcor2
Downstream geneHrasls3, Lgals12, Hrasls5, LOC433217, Slc22a19, LOC666543, BC014805, LOC632903, AB056442, LOC620946, LOC623030, 9530053H05Rik, EG434674, LOC100039705, D630002G06Rik, EG633120, EG666601, LOC100039749, C730048C13Rik, LOC100040004, LOC666612
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145O05.bB6Ng01-145O05.g
ACCDH943172DH943173
length920502
definitionDH943172|Mus musculus domesticus DNA, BAC clone: B6Ng01-145O05, 5' end.DH943173|Mus musculus domesticus DNA, BAC clone: B6Ng01-145O05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,584,639 - 7,585,566)(7,404,135 - 7,404,642)
sequence
gaattcaaaaatggaaggaaggtttgagtagtcagctttacaaagcaaaa
atttttattataaaatgtatatcgacacctccctgcatcaagctttccac
ttagtaaagggtttaaataagcacactgtaggatctactgtcaaaataac
tcaacaggaaaaaagagcaattacattaggagataggaattatcatggat
ttaaaagaatctaatttattttttgattggattaacacagcgtatgttac
agttctcatctagtgacaagcaaggtagtgtgcacctatatgtgggggtg
gagagcgaggcaccgcaggctcctgggactcctctaagagtcctgatctg
cgtcacatggcatagatctaagactgctcctagaacaccagtgagacagc
aaagaagaaccgaggccaaggcacagctgcttcccctgtcttcatgaagt
cctaagaggtgaggatactccccccactccttcagagtaacctcatcagg
catggctttcattggaggccagtgacgatgtggtgagatacaaatggaca
aggattagggggttgggattggttcaaacactgtatataagcttatatgc
tgggcaataaactgagatctgcaccctaatgctggtctccagagtcggat
ttcccaggcttcgtcatgtgactccatctcctctccccatacctatgatc
ccagagcacaggcagctgaaggcgccatctcaagatgactcctcaaggct
agcctagtgttacctaccgagttccagaccaacctggcaaacttatccaa
aaccaaaaaaattcctatctcaagaaaacaaaagaaacacaagttttcat
ttagttattctgtaataataatctaaactttcctttccttcttcttttct
ttctcccttccttcttcttt
taacagggtgttggttggtgggttgtagttggttgccatttgttatgtag
tcttgtgaaaagaagaaacaagaagaaattagatatcctgatggtgaaga
tcaaatttgccccaaggaactcaatgccccaatcagtaagtagcattgcc
tcctttccaacccctgattcagggatctctttcctttcctctctatcctt
ttttctttctttcctagtgttagggagttgaaagagtggaagaaaaaaaa
aggttgagaagggtggaagaaaagaagctacaaagtagcaaaagaccatt
tttctttttcattttacttatttttcgattactgtttttctcatgtgaaa
caggatctctgtacagcccaaactggtcttgatttcccaaccctatgcag
gagcctacaagtgctaggattacagatgtacacctggccttcttcccttt
gtttgttggtgtttggttttttggtttttgttttgttttgggttttttgt
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_7584639_7585566
seq2: B6Ng01-145O05.b_49_968 (reverse)

seq1  AAAAAAGAAGGAAGGAAAGAGAGAAAAGAAAAGAAAGAAAGGAAAGAAAA  50
      ||| |||||||||||  ||| |||||||  ||||| ||||||||||    
seq2  AAAGAAGAAGGAAGG-GAGAAAGAAAAG--AAGAAGGAAAGGAAAG----  43

seq1  GATTTAGA-TATTATTACAGAATAACTAAATGAAAACTTGTGTTTCTTTT  99
        |||||| |||||||||||||||||||||||||||||||||||||||||
seq2  --TTTAGATTATTATTACAGAATAACTAAATGAAAACTTGTGTTTCTTTT  91

seq1  GTTTTCTTGAGATAGGAATTTTTTTGGTTTTGGATAAGTTTGCCAGGTTG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTGAGATAGGAATTTTTTTGGTTTTGGATAAGTTTGCCAGGTTG  141

seq1  GTCTGGAACTCGGTAGGTAACACTAGGCTAGCCTTGAGGAGTCATCCTGA  199
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTCTGGAACTCGGTAGGTAACACTAGGCTAGCCTTGAGGAGTCATCTTGA  191

seq1  GATGGCGCCTTCAGCTGCCTGTGCTCTGGGATCATAGGTATGGGGAGAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCGCCTTCAGCTGCCTGTGCTCTGGGATCATAGGTATGGGGAGAGG  241

seq1  AGATGGAGTCACATGACGAAGCCTGGGAAATCCGACTCTGGAGACCAGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAGTCACATGACGAAGCCTGGGAAATCCGACTCTGGAGACCAGCA  291

seq1  TTAGGGTGCAGATCTCAGTTTATTGCCCAGCATATAAGCTTATATACAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTGCAGATCTCAGTTTATTGCCCAGCATATAAGCTTATATACAGT  341

seq1  GTTTGAACCAATCCCAACCCCCTAATCCTTGTCCATTTGTATCTCACCAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAACCAATCCCAACCCCCTAATCCTTGTCCATTTGTATCTCACCAC  391

seq1  ATCGTCACTGGCCTCCAATGAAAGCCATGCCTGATGAGGTTACTCTGAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTCACTGGCCTCCAATGAAAGCCATGCCTGATGAGGTTACTCTGAAG  441

seq1  GAGTGGGGGGAGTATCCTCACCTCTTAGGACTTCATGAAGACAGGGGAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGGGGAGTATCCTCACCTCTTAGGACTTCATGAAGACAGGGGAAG  491

seq1  CAGCTGTGCCTTGGCCTCGGTTCTTCTTTGCTGTCTCACTGGTGTTCTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTGCCTTGGCCTCGGTTCTTCTTTGCTGTCTCACTGGTGTTCTAG  541

seq1  GAGCAGTCTTAGATCTATGCCATGTGACGCAGATCAGGACTCTTAGAGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTCTTAGATCTATGCCATGTGACGCAGATCAGGACTCTTAGAGGA  591

seq1  GTCCCAGGAGCCTGCGGTGCCTCGCTCTCCACCCCCACATATAGGTGCAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGGAGCCTGCGGTGCCTCGCTCTCCACCCCCACATATAGGTGCAC  641

seq1  ACTACCTTGCTTGTCACTAGATGAGAACTGTAACATACGCTGTGTTAATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCTTGCTTGTCACTAGATGAGAACTGTAACATACGCTGTGTTAATC  691

seq1  CAATCAAAAAATAAATTAGATTCTTTTAAATCCATGATAATTCCTATCTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAAAAAATAAATTAGATTCTTTTAAATCCATGATAATTCCTATCTC  741

seq1  CTAATGTAATTGCTCTTTTTTCCTGTTGAGTTATTTTGACAGTAGATCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTAATTGCTCTTTTTTCCTGTTGAGTTATTTTGACAGTAGATCCT  791

seq1  ACAGTGTGCTTATTTAAACCCTTTACTAAGTGGAAAGCTTGATGCAGGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTGCTTATTTAAACCCTTTACTAAGTGGAAAGCTTGATGCAGGGA  841

seq1  GGTGTCGATATACATTTTATAATAAAAATTTTTGCTTTGTAAAGCTGACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCGATATACATTTTATAATAAAAATTTTTGCTTTGTAAAGCTGACT  891

seq1  ACTCAAACCTTCCTTCCATTTTTGAATTC  928
      |||||||||||||||||||||||||||||
seq2  ACTCAAACCTTCCTTCCATTTTTGAATTC  920

seq1: chr19_7404135_7404642
seq2: B6Ng01-145O05.g_69_576

seq1  GAATTCTAACAGGGTGTTGGTTGGTGGGTTGTAGTTGGTTGCCATTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACAGGGTGTTGGTTGGTGGGTTGTAGTTGGTTGCCATTTGTT  50

seq1  ATGTAGTCTTGTGAAAAGAAGAAACAAGAAGAAATTAGATATCCTGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTCTTGTGAAAAGAAGAAACAAGAAGAAATTAGATATCCTGATGG  100

seq1  TGAAGATCAAATTTGCCCCAAGGAACTCAATGCCCCAATCAGTAAGTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATCAAATTTGCCCCAAGGAACTCAATGCCCCAATCAGTAAGTAGC  150

seq1  ATTGCCTCCTTTCCAACCCCTGATTCAGGGATCTCTTTCCTTTCCTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTCCTTTCCAACCCCTGATTCAGGGATCTCTTTCCTTTCCTCTCT  200

seq1  ATCCTTTTTTCTTTCTTTCCTAGTGTTAGGGAGTTGAAAGAGTGGAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTTTTCTTTCTTTCCTAGTGTTAGGGAGTTGAAAGAGTGGAAGAA  250

seq1  AAAAAAAGGTTGAGAAGGGTGGAAGAAAAGAAGCTACAAAGTAGCAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGGTTGAGAAGGGTGGAAGAAAAGAAGCTACAAAGTAGCAAAAG  300

seq1  ACCATTTTTCTTTTTCATTTTACTTATTTTTCGATTACTGTTTTTCTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTTTCTTTTTCATTTTACTTATTTTTCGATTACTGTTTTTCTCAT  350

seq1  GTGAAACAGGATCTCTGTACAGCCCAAACTGGTCTTGATTTCCCAACCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAACAGGATCTCTGTACAGCCCAAACTGGTCTTGATTTCCCAACCCT  400

seq1  ATGCAGGAGCCTACAAGTGCTAGGATTACAGATGTACACCTGGCCTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGAGCCTACAAGTGCTAGGATTACAGATGTACACCTGGCCTTCTT  450

seq1  CCCTTTGTTTGTTGGTGTTTGGTTTTTTGGTTTTTGTTTTGTTTTGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGTTTGTTGGTGTTTGGTTTTTTGGTTTTTGTTTTGTTTTGGGTT  500

seq1  TTTTGTTT  508
      ||||||||
seq2  TTTTGTTT  508