BAC Information

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BAC

Clone NameB6Ng01-147D22
Chromosome19 (Build37)
Map Location 50,703,722 - 50,826,730
singlet/doubletdoublet
Overlap geneSorcs1
Upstream geneLOC629448, Siah1-ps1, EG433251
Downstream geneLOC100042924, LOC100042928
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147D22.bB6Ng01-147D22.g
ACCDH944179DH944180
length1,0101,104
definitionDH944179|Mus musculus domesticus DNA, BAC clone: B6Ng01-147D22, 5' end.DH944180|Mus musculus domesticus DNA, BAC clone: B6Ng01-147D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,703,722 - 50,704,735)(50,825,613 - 50,826,730)
sequence
gaattccctctgactacagggaatttagaagaatagtggagaatctgggt
gaggtcatgggacaagcaagtttcattcactagggacagatttcccgatg
caggacgagctttagatcaccagggctctccacttgtcatgtatcactct
tagaattatacacacacacacacacacaaaggaaacataagcagtgtttg
tcaaaggtgtttcattttgcttcctacagctcagtgggcatttcattagt
gttttccttcagcaccaaaaagaaaaggaatgaaaggaaaagccttgcca
ggccagatgcgaaagcatggtggttctttggcctaactcagcgctttcag
gactgacaactgaatgagctgcacatgcacccccatcaatgtgagcaaag
ttaaaaggtgtgaaaagtagtgcaaattctttatctctatgaacaggaaa
agactttgtcaacactacctaaaggattttattaggcttctgcttcctct
actgaggagacacggaaattgcacttgctactgcctgccatgccttgctc
tcagtctttcagcaaagcagcctcaaatgggagagagccattatctactc
tttctgctcacaagcatgtttcccgtctgcactcctgcccaggcgcttgt
ctaaagccacgctgatttcccagagtctgaccagaaagccttgtgtggtt
tttagtgctatgtgttgaacgaacttagagggttagatgggcattttgat
gtaagctgatcatcagttcttgcttgctaataatcatctctgcacgctat
tttgcataagataatataagaaaggaacaagagccatcctaacgctgccc
tcaatgggcaaacaactggcctggttgggcttttgtcactgcagaggcta
atattcctgactagcttttcttttctttcacacacacacacacacacaca
cacacacacacacacacacacacacacacacacacacacacactcacctg
caatcactga
gaattccactacattggggcattgagccttcacaagaccaagggcctctc
ctcaccattcttggggctcaagagatgcttcatcaattaagagtgataat
cttattgcataaattcagagttcagttcccagaacccacaccaattggct
tagaactgcctgtaattatagctccaggtgatacaagccttcttctggtc
ctgtctccacaaattcaaacagaggaatacagatacatataactaaattt
ttaagactgcacatgtagttgtttttacttcatgtgtattgatgttttac
ctatgtgtacctctgtgcacctcatgaatggctcatgcccatggagtaaa
aaaaaaaaagtacatttgatcccctgaaactggagttacacatggttgta
agtcctcatttgggtcctgggaatctaactggggtaatctagaagagtaa
gaaatgctctcacctgctaagccatctccccatccccttaaaataaatct
ttaaaaataaaatatttcttttatcattactttcatgagagcctacaata
tgctcagttttacataatctttttacataatgattggataaatggtccat
gtctgactatgtagcattaaattaatattagttttaaaatgtctaataga
agattcttaaaatatttagaggggggaaatatgtagcatagattttggtc
ttctaattccacagactaaagtggcattaatcagacatccttgatatatg
ctccaatctacagaaaagagactatgcagcattgcattaagtaaggggca
gcaggatgcacacttgccacagtcctgactctgccctttgatacgtttcc
tgctttaaatcctgtgttaggagttgtgagaaatggagagaaatggatat
atttcataactgaaagtaaatggaagtggttatttttgaattcagcacat
tgcccgatgtcaatacttaacaaaatgttagttctatttctttattcact
aaaggttatgttgtaatgcctcattccacaatgtgtagcgaaaacatgta
gtgacagtcgatgaacagagtctggtttggacctggtgatcactaaacct
tcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_50703722_50704735
seq2: B6Ng01-147D22.b_48_1057

seq1  GAATTCCCTCTGACTACAGGGAATTTAGAAGAATAGTGGAGAATCTGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCTGACTACAGGGAATTTAGAAGAATAGTGGAGAATCTGGGT  50

seq1  GAGGTCATGGGACAAGCAAGTTTCATTCACTAGGGACAGATTTCCCGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCATGGGACAAGCAAGTTTCATTCACTAGGGACAGATTTCCCGATG  100

seq1  CAGGACGAGCTTTAGATCACCAGGGCTCTCCACTTGTCATGTATCACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACGAGCTTTAGATCACCAGGGCTCTCCACTTGTCATGTATCACTCT  150

seq1  TAGAATTATACACACACACACACACACAAAGGAAACATAAGCAGTGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTATACACACACACACACACACAAAGGAAACATAAGCAGTGTTTG  200

seq1  TCAAAGGTGTTTCATTTTGCTTCCTACAGCTCAGTGGGCATTTCATTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGTGTTTCATTTTGCTTCCTACAGCTCAGTGGGCATTTCATTAGT  250

seq1  GTTTTCCTTCAGCACCAAAAAGAAAAGGAATGAAAGGAAAAGCCTTGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCTTCAGCACCAAAAAGAAAAGGAATGAAAGGAAAAGCCTTGCCA  300

seq1  GGCCAGATGCGAAAGCATGGTGGTTCTTTGGCCTAACTCAGCGCTTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGATGCGAAAGCATGGTGGTTCTTTGGCCTAACTCAGCGCTTTCAG  350

seq1  GACTGACAACTGAATGAGCTGCACATGCACCCCCATCAATGTGAGCAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGACAACTGAATGAGCTGCACATGCACCCCCATCAATGTGAGCAAAG  400

seq1  TTAAAAGGTGTGAAAAGTAGTGCAAATTCTTTATCTCTATGAACAGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGTGTGAAAAGTAGTGCAAATTCTTTATCTCTATGAACAGGAAA  450

seq1  AGACTTTGTCAACACTACCTAAAGGATTTTATTAGGCTTCTGCTTCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTGTCAACACTACCTAAAGGATTTTATTAGGCTTCTGCTTCCTCT  500

seq1  ACTGAGGAGACACGGAAATTGCACTTGCTACTGCCTGCCATGCCTTGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGAGACACGGAAATTGCACTTGCTACTGCCTGCCATGCCTTGCTC  550

seq1  TCAGTCTTTCAGCAAAGCAGCCTCAAATGGGAGAGAGCCATTATCTACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTTTCAGCAAAGCAGCCTCAAATGGGAGAGAGCCATTATCTACTC  600

seq1  TTTCTGCTCACAAGCATGTTTCCCGTCTGCACTCCTGCCCAGGCGCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTCACAAGCATGTTTCCCGTCTGCACTCCTGCCCAGGCGCTTGT  650

seq1  CTAAAGCCACGCTGATTTCCCAGAGTCTGACCAGAAAGCCTTGTGTGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCCACGCTGATTTCCCAGAGTCTGACCAGAAAGCCTTGTGTGGTT  700

seq1  TTTAGTGCTATGTGTTGAACGAACTTAGAGGGTTAGATGGGCATTTTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGCTATGTGTTGAACGAACTTAGAGGGTTAGATGGGCATTTTGAT  750

seq1  GTAAGCTGATCATCAGTTCTTGCTTGCTAATAATCATCTCTGCACGCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCTGATCATCAGTTCTTGCTTGCTAATAATCATCTCTGCACGCTAT  800

seq1  TTTGCATAAGATAATATAAGAAAGGAACAAGAGCCATCCTAACGCTGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATAAGATAATATAAGAAAGGAACAAGAGCCATCCTAACGCTGCCC  850

seq1  TCAATGGGCAAACAACTGGCCTGGTTGGGCTTTTGTCACTGCAGAGGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGGCAAACAACTGGCCTGGTTGGGCTTTTGTCACTGCAGAGGCTA  900

seq1  ATATTCCTGACTAGCTTTTTCTTTTTCTTTCAACACACACACACACACAC  950
      |||||||||||||||||||   ||||||||| ||||||||||||||||||
seq2  ATATTCCTGACTAGCTTTT--CTTTTCTTTC-ACACACACACACACACAC  947

seq1  ACACACACACACACACACACACACACACACACACACACACACACACACAC  1000
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACACACACACACACACACACACACACACACACACACACACACACACTCAC  997

seq1  ACTGCAATCACTGA  1014
       |||||||||||||
seq2  -CTGCAATCACTGA  1010

seq1: chr19_50825613_50826730
seq2: B6Ng01-147D22.g_65_1168 (reverse)

seq1  GTGAA-GATTAGTGATCAAACAAGTTCAAACCAGACTCTGTTCATCGACT  49
      ||||| | ||||||||| | || || ||||||||||||||||||||||||
seq2  GTGAAGGTTTAGTGATC-ACCAGGTCCAAACCAGACTCTGTTCATCGACT  49

seq1  GTCACTACAATGTTTTCGCCTAACACATTGTGATATTGAGGACATTTTAC  99
      |||||||| ||||||||||   ||||||||||  | ||||| ||  ||||
seq2  GTCACTAC-ATGTTTTCGC--TACACATTGTG-GAATGAGG-CA--TTAC  92

seq1  AACATAGACTTTTAGTGACATAAAGGAAATAGAACTAACAATTTTGTTAA  149
      |||||| || |||||||| ||||| |||||||||||||| ||||||||||
seq2  AACATA-ACCTTTAGTGA-ATAAA-GAAATAGAACTAAC-ATTTTGTTAA  138

seq1  GTATTGACAATCGGGCAATGTGCTGAATTCAAAAATAACCACTTCCATTT  199
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGAC-ATCGGGCAATGTGCTGAATTCAAAAATAACCACTTCCATTT  187

seq1  ACTTTCAGTTTATGAAATTATATCCATTTCTCTCCATTTCTCACAACTCC  249
      |||||||| |||||||| ||||||||||||||||||||||||||||||||
seq2  ACTTTCAG-TTATGAAA-TATATCCATTTCTCTCCATTTCTCACAACTCC  235

seq1  TAACACAGGATTTAAAGCAGGAAACGTATCAAAGGGCAGAGTCAGGACTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAGGATTTAAAGCAGGAAACGTATCAAAGGGCAGAGTCAGGACTG  285

seq1  TGGCAAGTGTGCATCCTGCTGCCCCTTACTTAATGCAATGCTGCATAGTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGTGTGCATCCTGCTGCCCCTTACTTAATGCAATGCTGCATAGTC  335

seq1  TCTTTTCTGTAGATTGGAGCATATATCAAGGATGTCTGATTAATGCCACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTGTAGATTGGAGCATATATCAAGGATGTCTGATTAATGCCACT  385

seq1  TTAGTCTGTGGAATTAGAAGACCAAAATCTATGCTACATATTTCCCCCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTGTGGAATTAGAAGACCAAAATCTATGCTACATATTTCCCCCCT  435

seq1  CTAAATATTTTAAGAATCTTCTATTAGACATTTTAAAACTAATATTAATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATATTTTAAGAATCTTCTATTAGACATTTTAAAACTAATATTAATT  485

seq1  TAATGCTACATAGTCAGACATGGACCATTTATCCAATCATTATGTAAAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTACATAGTCAGACATGGACCATTTATCCAATCATTATGTAAAAA  535

seq1  GATTATGTAAAACTGAGCATATTGTAGGCTCTCATGAAAGTAATGATAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATGTAAAACTGAGCATATTGTAGGCTCTCATGAAAGTAATGATAAA  585

seq1  AGAAATATTTTATTTTTAAAGATTTATTTTAAGGGGATGGGGAGATGGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATTTTATTTTTAAAGATTTATTTTAAGGGGATGGGGAGATGGCT  635

seq1  TAGCAGGTGAGAGCATTTCTTACTCTTCTAGATTACCCCAGTTAGATTCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGGTGAGAGCATTTCTTACTCTTCTAGATTACCCCAGTTAGATTCC  685

seq1  CAGGACCCAAATGAGGACTTACAACCATGTGTAACTCCAGTTTCAGGGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCCAAATGAGGACTTACAACCATGTGTAACTCCAGTTTCAGGGGA  735

seq1  TCAAATGTACTTTTTTTTTTTTACTCCATGGGCATGAGCCATTCATGAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTACTTTTTTTTTTTTACTCCATGGGCATGAGCCATTCATGAGG  785

seq1  TGCACAGAGGTACACATAGGTAAAACATCAATACACATGAAGTAAAAACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGAGGTACACATAGGTAAAACATCAATACACATGAAGTAAAAACA  835

seq1  ACTACATGTGCAGTCTTAAAAATTTAGTTATATGTATCTGTATTCCTCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATGTGCAGTCTTAAAAATTTAGTTATATGTATCTGTATTCCTCTG  885

seq1  TTTGAATTTGTGGAGACAGGACCAGAAGAAGGCTTGTATCACCTGGAGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATTTGTGGAGACAGGACCAGAAGAAGGCTTGTATCACCTGGAGCT  935

seq1  ATAATTACAGGCAGTTCTAAGCCAATTGGTGTGGGTTCTGGGAACTGAAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTACAGGCAGTTCTAAGCCAATTGGTGTGGGTTCTGGGAACTGAAC  985

seq1  TCTGAATTTATGCAATAAGATTATCACTCTTAATTGATGAAGCATCTCTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTTATGCAATAAGATTATCACTCTTAATTGATGAAGCATCTCTT  1035

seq1  GAGCCCCAAGAATGGTGAGGAGAGGCCCTTGGTCTTGTGAAGGCTCAATG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCCAAGAATGGTGAGGAGAGGCCCTTGGTCTTGTGAAGGCTCAATG  1085

seq1  CCCCAATGTAGTGGAATTC  1118
      |||||||||||||||||||
seq2  CCCCAATGTAGTGGAATTC  1104