BAC Information

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BAC

Clone NameB6Ng01-148M17
Chromosome19 (Build37)
Map Location 18,681,859 - 18,682,890
singlet/doubletsinglet
Overlap geneOstf1
Upstream genePcsk5, Eef1a1-ps1, LOC383440, LOC666712
Downstream geneBC016495, LOC100042193, 2410127L17Rik, LOC100042184, D030056L22Rik, Trpm6, Rorb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148M17.bB6Ng01-148M17.g
ACCDH945305DH945306
length1,029891
definitionDH945305|Mus musculus domesticus DNA, BAC clone: B6Ng01-148M17, 5' end.DH945306|Mus musculus domesticus DNA, BAC clone: B6Ng01-148M17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagccctgagcctttagaacatggagtgaaaaggatagataaaa
ggcaacgcccagtattaagcagtagtaagtaggggtctgtgatgaactgt
cttggtattttaccgctggaatgctgctttgtgtgtctggctaatctcct
tcagtatttagcatcaaaatggaaagaactggaactatgcaaattggtgg
tttgtatcttgtttacaagagtatccaccagtcgtccctccttagactat
ctctgaagggaactggaaagctctagcctggatgttggtcacgagaggac
tgcttcctttgtgacttctctctggaaagtttgaggtaactgagatgaca
atctgaaccatctgagaacgatcacctcagcctggagcctttctcaggca
gccccgcctccttcccctgccctccttgtttctgcaccaactctcacggt
atagagcttgctgtgtagagccctctggatctacacggtagggttaaagg
tggtgtttcctttctccataaatcaggggtgggaggtatggatagtcccc
aaacaagcaaactaacaacaacaagaaaaaaaaaaattacatctatttgt
ttgcaggaaccttacccactgagctatcttcccagccctgcttacttttt
gagacagggcttcactctggtacaggctggcctggatgttactgtgtgtg
tagcccagggtggtctcacactccgggcagccctgtcttagcctcggaat
gctatctagccttgcaggtgtgagctagtgtacttgagagaggttttctg
ttacactcatcaagtcccgggagactctgagatgctttccacggtaggac
atttacaggaaagagactgatttcctcccctgctcggaatgatacggtat
ggccgcagttttcacacgtataatgttctattaaccattcagtgcagtga
atgggaacagcagtgtaattagaatgtgagggccccataaatgttgcagt
tggtcaaggtatgtggtggtaacctgggc

gaattctgtgggcttcttgtatgatcatgggcatctctttctttatgttt
gggaagttttcttctattattttgttgaagatatttgctggctctttaag
ttgaaaatcttcattctcatcaactcctattatccgtaggtttggtcttc
tcattgtgtcctggatttcctggatgttttgagttaggatccttttgcat
tttgtattttctttgattgttgtgccgatgttctctatggaatcttctgc
acctgagattctctcttccatttcttgtattctgttgctgatgctcgcat
ctatggttccagatctctttcctagggtttctatctccagcgttgcctcg
ctttgggttttctttattgtgtctacttccctttttagttctagtattgt
tttgttcatttccatcacctgtttggatgtgttttcctgtttttctttaa
ggacttctaactgtttggttgtgttttcctgtttttctttaaggacctgt
aactctttagcagtgctctcctgtatttctttaagtgagttatgaaagtc
cttcttgatgtcctctaccatcatcgtgtttttaaatctgggtctagatt
ttcggttgtgttggggtgcccaggactaggtggggtgggagtgctgcgtt
ctgatgatggtgagtggtcttggtttctgttagtaggatcttacgtttgc
cttttcgccatctggtaatctctgaaagctagctgttatagttggtctct
ggatagagcttgttcctcaagtgactctgttagtctctatgaggagacct
gggaggctagctctctccttagttcagtggacagagtatctctgcaggca
agctctcttcttgcagggaggtgccagatatcttgtgttcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_18681859_18682890
seq2: B6Ng01-148M17.b_47_1075 (reverse)

seq1  GCCCAGGTTCACA-CACATACCTTGAACAACTGCACCATTTATGGGGCCC  49
      |||||||||  || |||||||||||| |||||||| ||||||||||||||
seq2  GCCCAGGTTACCACCACATACCTTGACCAACTGCAACATTTATGGGGCCC  50

seq1  TTCACATTCTAATTTACACTGCTGTTTCCATTCACTGCACTGAAT-GTTT  98
       ||||||||||| ||||||||||||| |||||||||||||||||| ||| 
seq2  -TCACATTCTAA-TTACACTGCTGTTCCCATTCACTGCACTGAATGGTTA  98

seq1  ATAGAACATTTATAACGTGTGAAAACTGCGGCCATACCGTATCATTCCGA  148
      |||||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  ATAGAACA-TTAT-ACGTGTGAAAACTGCGGCCATACCGTATCATTCCGA  146

seq1  GCAGGGGAGGAAATCAGTCTCTTTCCTGTAAATGTCCTACCGTGGAAAAG  198
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCAGGGGAGGAAATCAGTCTCTTTCCTGTAAATGTCCTACCGTGG-AAAG  195

seq1  CATCTCAGAGTCTCCCGGGACTTGATGAGTGTAACAGAAAACCTCTCTCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAGAGTCTCCCGGGACTTGATGAGTGTAACAGAAAACCTCTCTCA  245

seq1  AGTACACTAGCTCACACCTGCAAGGCTAGATAGCATTCCGAGGCTAAGAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACTAGCTCACACCTGCAAGGCTAGATAGCATTCCGAGGCTAAGAC  295

seq1  AGGGCTGCCCGGAGTGTGAGACCACCCTGGGCTACACACACAGTAACATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGCCCGGAGTGTGAGACCACCCTGGGCTACACACACAGTAACATC  345

seq1  CAGGCCAGCCTGTACCAGAGTGAAGCCCTGTCTCAAAAAGTAAGCAGGGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCAGCCTGTACCAGAGTGAAGCCCTGTCTCAAAAAGTAAGCAGGGC  395

seq1  TGGGAAGATAGCTCAGTGGGTAAGGTTCCTGCAAACAAATAGATGTAATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGATAGCTCAGTGGGTAAGGTTCCTGCAAACAAATAGATGTAATT  445

seq1  TTTTTTTTTCTTGTTGTTGTTAGTTTGCTTGTTTGGGGACTATCCATACC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCTTGTTGTTGTTAGTTTGCTTGTTTGGGGACTATCCATACC  495

seq1  TCCCACCCCTGATTTATGGAGAAAGGAAACACCACCTTTAACCCTACCGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCCCTGATTTATGGAGAAAGGAAACACCACCTTTAACCCTACCGT  545

seq1  GTAGATCCAGAGGGCTCTACACAGCAAGCTCTATACCGTGAGAGTTGGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATCCAGAGGGCTCTACACAGCAAGCTCTATACCGTGAGAGTTGGTG  595

seq1  CAGAAACAAGGAGGGCAGGGGAAGGAGGCGGGGCTGCCTGAGAAAGGCTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACAAGGAGGGCAGGGGAAGGAGGCGGGGCTGCCTGAGAAAGGCTC  645

seq1  CAGGCTGAGGTGATCGTTCTCAGATGGTTCAGATTGTCATCTCAGTTACC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGAGGTGATCGTTCTCAGATGGTTCAGATTGTCATCTCAGTTACC  695

seq1  TCAAACTTTCCAGAGAGAAGTCACAAAGGAAGCAGTCCTCTCGTGACCAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTTTCCAGAGAGAAGTCACAAAGGAAGCAGTCCTCTCGTGACCAA  745

seq1  CATCCAGGCTAGAGCTTTCCAGTTCCCTTCAGAGATAGTCTAAGGAGGGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGGCTAGAGCTTTCCAGTTCCCTTCAGAGATAGTCTAAGGAGGGA  795

seq1  CGACTGGTGGATACTCTTGTAAACAAGATACAAACCACCAATTTGCATAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTGGTGGATACTCTTGTAAACAAGATACAAACCACCAATTTGCATAG  845

seq1  TTCCAGTTCTTTCCATTTTGATGCTAAATACTGAAGGAGATTAGCCAGAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTTCTTTCCATTTTGATGCTAAATACTGAAGGAGATTAGCCAGAC  895

seq1  ACACAAAGCAGCATTCCAGCGGTAAAATACCAAGACAGTTCATCACAGAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAGCAGCATTCCAGCGGTAAAATACCAAGACAGTTCATCACAGAC  945

seq1  CCCTACTTACTACTGCTTAATACTGGGCGTTGCCTTTTATCTATCCTTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACTTACTACTGCTTAATACTGGGCGTTGCCTTTTATCTATCCTTTT  995

seq1  CACTCCATGTTCTAAAGGCTCAGGGCTGGAATTC  1032
      ||||||||||||||||||||||||||||||||||
seq2  CACTCCATGTTCTAAAGGCTCAGGGCTGGAATTC  1029


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