BAC Information

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BAC

Clone NameB6Ng01-149K05
Chromosome19 (Build37)
Map Location 51,865,624 - 51,866,683
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042924, LOC100042928
Downstream geneLOC668536, LOC100042936, Ins1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149K05.bB6Ng01-149K05.g
ACCDH945923DH945924
length9681,049
definitionDH945923|Mus musculus domesticus DNA, BAC clone: B6Ng01-149K05, 5' end.DH945924|Mus musculus domesticus DNA, BAC clone: B6Ng01-149K05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaagtgctgggaagcacttgaaaaaata
ttcaacatccttaatcatcagggatgcaaattcaaacatccctgtgatac
cacctcacaccagtaagaatgcctaggaacaaaaattcaggtgacagcag
atgctggtgaggatgtggagaaagaggaacactcctccattgctggtggg
attgcaagctgggacaacaactctgtaaatcagtttggcagggttttttt
ttttgttttttgttttgttttgttttgtttttgtttttgtttgtttgttt
gtttttttcagaaaactggacatagtactaccggtagatgcagcaattcc
tctcctgggcatatatacccagaagatgtatcaacctgtaataagaacac
atgctctactattttcatagcagccttatttataatagccagaagctgaa
aagaacccagatttccttcaacaaaggaatggttacagaaaatgtggtat
atttacacaatggaatactactcagctattaaaaacaatgaatttatgaa
attcttgggcaaatggatgtatctagaggatatcatcctgagtgaggtaa
cccaatcagaaaagaagtcacttaatatgcactcactgataagtggatat
tagcccagaaacctagaatacccaagatacaacttccaaaacacaagaaa
atcaagaagaaagatcaacgtggggatacttcattcctccctagaatagg
gaataaaatatccatggaaggagttgcagagatgaagtttggagctaaga
tgaaaggatgaaccatccagagacagccctacctgggagttcatcccata
tcaaccaccaaacacagacactatttgcatatgccagcaagattttgctg
aaagatgctaatatagctgtctcgttgaggcttgccgtgcctggcaaata
cagaagtgatgctctagt
gaattcttaagcatgattgcatacatatatctttggaaattagcttgaac
attttggtgtccatattctgaagtcacgtgacgatcataccccaagttat
atatgtaagtgtttgaggtgcctccatactcatttacataatgattggat
aatttgcattcctatctgtagagaatctataaatacaggttcttcttgcc
aagtatcattaacaattgttcttagtttctttttatttttgtatttaatt
cttttttttctttttcatattttagttttttgataaattcatgcatgtgt
tttgattatatttaccttacccaatttcttacaaatctacctcctccctt
ctacgcccacccaacattgtattgtctgttttgtttttgacccatcaaat
ctaatttatgatgtctattcattcttggatttatgacctcccaggagagc
attgttgacctaccaagtgttacacctttaaagtaaacaatccctttctg
aggaactatccttcctcagtagcattcatgctaaaagttcaggagaattt
caagggtagtcctctatacaagctgagaattttccacgcataagcttatt
tatgctgttataatactttgatttaatatgggcaactttccaccagtgtt
taaaagacactgtttccttgcagtttctgactgccaccatagtctttctg
acccatgtgtcacaatgatccctgagtcttaggagttgggagtgtaatgt
aagcattccatttaggcctggacattccattgtcacttattctctttcaa
ttaagcaaatgcagatctttgtgataaatgtaacttactgaaaatagctc
tttctggtgagagctgtgagatcattgatctgaggtctagtctttgtgga
tccagtttatacatgtctactttgcagaataagagtatgacttagtccta
tctagtgagctcctgtactgagacatagtttaaaatatgagttcatcttg
tgcagggacctaatttgatggtcaactcttatcagactggtccctgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_51865624_51866683
seq2: B6Ng01-149K05.g_69_1117 (reverse)

seq1  CTACAGTGACCAGTCTGATAAGACGTTGACCATTCAATTTTAGGTTCCCT  50
      |||||| |||||||||||||||| |||||||||  ||  ||||| |||||
seq2  CTACAGGGACCAGTCTGATAAGA-GTTGACCATCAAA--TTAGG-TCCCT  46

seq1  GCACAAGATGAAACTCATATTTTAAACTATGTCTCAGTACAGGAGCTTCA  100
      |||||||||| ||||||||||||||||||||||||||||||||||| |||
seq2  GCACAAGATG-AACTCATATTTTAAACTATGTCTCAGTACAGGAGC-TCA  94

seq1  CTAGATAAGACCTAGGTCATTACTCTTATTCTGCAAAGTAGACATTGTAT  150
      ||||||| || ||| |||| |||||||||||||||||||||||| |||||
seq2  CTAGATAGGA-CTAAGTCA-TACTCTTATTCTGCAAAGTAGACA-TGTAT  141

seq1  AAAACTGAAT-CACAAAGACTAGACCTCAGATCAATGAATCTCACAGCTC  199
       |||||| || |||||||||||||||||||||||||| ||||||||||||
seq2  -AAACTGGATCCACAAAGACTAGACCTCAGATCAATG-ATCTCACAGCTC  189

seq1  TCACCAGAAAGAAGCTATTTTCAGTAAGTTACAATTATCACAAAGATCTG  249
      ||||||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  TCACCAGAAAG-AGCTATTTTCAGTAAGTTACATTTATCACAAAGATCTG  238

seq1  CATTTGCTTAATTGAAAGAGAATAAGTGACAATGGAATGTCCAGGCCTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCTTAATTGAAAGAGAATAAGTGACAATGGAATGTCCAGGCCTAA  288

seq1  ATGGAATGCTTACATTACACTCCCAACTCCTAAGACTCAGGGATCATTGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATGCTTACATTACACTCCCAACTCCTAAGACTCAGGGATCATTGT  338

seq1  GACACATGGGTCAGAAAGACTATGGTGGCAGTCAGAAACTGCAAGGAAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATGGGTCAGAAAGACTATGGTGGCAGTCAGAAACTGCAAGGAAAC  388

seq1  AGTGTCTTTTAAACACTGGTGGAAAGTTGCCCATATTAAATCAAAGTATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTTTTAAACACTGGTGGAAAGTTGCCCATATTAAATCAAAGTATT  438

seq1  ATAACAGCATAAATAAGCTTATGCGTGGAAAATTCTCAGCTTGTATAGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAGCATAAATAAGCTTATGCGTGGAAAATTCTCAGCTTGTATAGAG  488

seq1  GACTACCCTTGAAATTCTCCTGAACTTTTAGCATGAATGCTACTGAGGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACCCTTGAAATTCTCCTGAACTTTTAGCATGAATGCTACTGAGGAA  538

seq1  GGATAGTTCCTCAGAAAGGGATTGTTTACTTTAAAGGTGTAACACTTGGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGTTCCTCAGAAAGGGATTGTTTACTTTAAAGGTGTAACACTTGGT  588

seq1  AGGTCAACAATGCTCTCCTGGGAGGTCATAAATCCAAGAATGAATAGACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAACAATGCTCTCCTGGGAGGTCATAAATCCAAGAATGAATAGACA  638

seq1  TCATAAATTAGATTTGATGGGTCAAAAACAAAACAGACAATACAATGTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAATTAGATTTGATGGGTCAAAAACAAAACAGACAATACAATGTTG  688

seq1  GGTGGGCGTAGAAGGGAGGAGGTAGATTTGTAAGAAATTGGGTAAGGTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGCGTAGAAGGGAGGAGGTAGATTTGTAAGAAATTGGGTAAGGTAA  738

seq1  ATATAATCAAAACACATGCATGAATTTATCAAAAAACTAAAATATGAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCAAAACACATGCATGAATTTATCAAAAAACTAAAATATGAAAA  788

seq1  AGAAAAAAAAGAATTAAATACAAAAATAAAAAGAAACTAAGAACAATTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAAGAATTAAATACAAAAATAAAAAGAAACTAAGAACAATTGT  838

seq1  TAATGATACTTGGCAAGAAGAACCTGTATTTATAGATTCTCTACAGATAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATACTTGGCAAGAAGAACCTGTATTTATAGATTCTCTACAGATAG  888

seq1  GAATGCAAATTATCCAATCATTATGTAAATGAGTATGGAGGCACCTCAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAAATTATCCAATCATTATGTAAATGAGTATGGAGGCACCTCAAA  938

seq1  CACTTACATATATAACTTGGGGTATGATCGTCACGTGACTTCAGAATATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACATATATAACTTGGGGTATGATCGTCACGTGACTTCAGAATATG  988

seq1  GACACCAAAATGTTCAAGCTAATTTCCAAAGATATATGTATGCAATCATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCAAAATGTTCAAGCTAATTTCCAAAGATATATGTATGCAATCATG  1038

seq1  CTTAAGAATTC  1060
      |||||||||||
seq2  CTTAAGAATTC  1049