BAC Information

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BAC

Clone NameB6Ng01-150P10
Chromosome19 (Build37)
Map Location 22,900,575 - 22,901,635
singlet/doubletsinglet
Overlap geneTrpm3
Upstream geneTmem2, EG433229, EG433230
Downstream geneKlf9, Smc5, Mamdc2, 1700028P14Rik, LOC670565, LOC226030, EG625193, Ptar1, Apba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150P10.bB6Ng01-150P10.g
ACCDH946906DH946907
length8411,046
definitionDH946906|Mus musculus domesticus DNA, BAC clone: B6Ng01-150P10, 5' end.DH946907|Mus musculus domesticus DNA, BAC clone: B6Ng01-150P10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccaggtccagcttcagtttcttaggtttttgggcccttttata
atttccttttaggcctttctagatcatgaggcaaatgcactgtggtctat
tcctttatggagtaatgactgggagttgaactttgaatgctagtgggcca
gatatttctcaaccacagtactggttagcatggaggatggggtgattctg
tctgaggcactagaggaggatgctccctggcctccacttctagatctagt
accaccctccaacttacgacaatccaaatactcctagagtataaactggt
acaggccctatggaaatcatatcatacaatatgaaatcatgaaccagaca
taaaactcccatttggtcagatatacaacacctgtgcatacacctaaggg
ttgccacagcctacttctgtgaaactcgctcatccatacccataagtgct
ctaatcacaatggctaggaaatggcataagtctggatatcaacgaactga
tgggtggataatgaaaatgtagtacatacacaatagaattttaattctga
tgtgaagaaaaataaaattatggaattgttaggcaagttgatagaactag
aaaaaaattataccaggaaaagtgacccaggctcagaaagataaatgcca
catggtttctctcagatgtggatcccaacttcagatctttatcttgtgct
taatttggaatacctgtagaagtaagggcaccagaaaaaggctactgggg
tgggtaatagcttaatggaggggaaatatatatatagtataggtgacatg
aaaacagaaagggcacatgtgggggtggtggtggaaaattt
gaattctcaggagattgagtcagtctgacagaaagacaggctctgaaact
caagcaacctgaaaaatgccctgagttttccctccctggagactccagga
aaactgaggctgtaaagtcatcttccctggtggtccccgggagcatagaa
ggcgtgtgctagggcttttagaacgagatccttgggtggaaccagatttt
cttctttgagacagttctcactacatagcccttagtgtttgtctggtttt
atttgtttgttctttttttttttttttttgagacagttctcaatatgtag
cccaggttagccttgactgacctcaggatgcccctgcctcccaaccttct
aagtgctgggacaccagatgccatcaccatagcaagtgacatggacataa
tattgtgataattaaagagcttatcatccacttcttttaggaagaaaata
ttcttctagtccattttcctaggagattgacttgaccccatccagcctga
agtccctgaggctatggctgctggaatatggccttagctcgtctttcaga
gatgctcatgattgtaaggagccagtaatgctgtcattagactccactaa
ctgacaaaaattgggtctttcatttttctagagtgaataaaaaataacac
ctggttcctccctagggaactgacaagtccgctgctcctgatataaacgc
actcatttttgggatttcagaaagcccattgtgtagtgcataatcttgtg
agattccccactgatagatacatttaggttcattgatctgttaatataga
agactttatttttcaaaattgtggtccaaaaagggcacgtttttctcatt
atctaaaaactaccattgttctttcagaggctcaagctgttcttctgatg
acgtttttgaaatgatgagctttgagtagtctccttaactcacttcctct
gtgtggaacaagcatgacagatccttaaatatcgttatcaagatttataa
aaaattatagttatcaaactatactcttctgacatttctattgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_22900575_22901635
seq2: B6Ng01-150P10.g_70_1115

seq1  GAATTCTCAGGAGATTGAGTCAGTCTGACAGAAAGACAGGCTCTGAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGAGATTGAGTCAGTCTGACAGAAAGACAGGCTCTGAAACT  50

seq1  CAAGCAACCTGAAAAATGCCCTGAGTTTTCCCTCCCTGGAGACTCCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAACCTGAAAAATGCCCTGAGTTTTCCCTCCCTGGAGACTCCAGGA  100

seq1  AAACTGAGGCTGTAAAGTCATCTTCCCTGGTGGTCCCCGGGAGCATAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAGGCTGTAAAGTCATCTTCCCTGGTGGTCCCCGGGAGCATAGAA  150

seq1  GGCGTGTGCTAGGGCTTTTAGAACGAGATCCTTGGGTGGAACCAGATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGTGCTAGGGCTTTTAGAACGAGATCCTTGGGTGGAACCAGATTTT  200

seq1  CTTCTTTGAGACAGTTCTCACTACATAGCCCTTAGTGTTTGTCTGGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGAGACAGTTCTCACTACATAGCCCTTAGTGTTTGTCTGGTTTT  250

seq1  ATTTGTTTGTTCTTTTTTTTTTTTTTTTTGAGACAGTTCTCAATATGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTTGTTCTTTTTTTTTTTTTTTTTGAGACAGTTCTCAATATGTAG  300

seq1  CCCAGGTTAGCCTTGACTGACCTCAGGATGCCCCTGCCTCCCAACCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTTAGCCTTGACTGACCTCAGGATGCCCCTGCCTCCCAACCTTCT  350

seq1  AAGTGCTGGGACACCAGATGCCATCACCATAGCAAGTGACATGGACATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTGGGACACCAGATGCCATCACCATAGCAAGTGACATGGACATAA  400

seq1  TATTGTGATAATTAAAGAGCTTATCATCCACTTCTTTTAGGAAGAAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGATAATTAAAGAGCTTATCATCCACTTCTTTTAGGAAGAAAATA  450

seq1  TTCTTCTAGTCCATTTTCCTAGGAGATTGACTTGACCCCATCCAGCCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTAGTCCATTTTCCTAGGAGATTGACTTGACCCCATCCAGCCTGA  500

seq1  AGTCCCTGAGGCTATGGCTGCTGGAATATGGCCTTAGCTCGTCTTTCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTGAGGCTATGGCTGCTGGAATATGGCCTTAGCTCGTCTTTCAGA  550

seq1  GATGCTCATGATTGTAAGGAGCCAGTAATGCTGTCATTAGACTCCACTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCATGATTGTAAGGAGCCAGTAATGCTGTCATTAGACTCCACTAA  600

seq1  CTGACAAAAATTGGGTCTTTCATTTTTCTAGAGTGAATAAAAAATAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAAAAATTGGGTCTTTCATTTTTCTAGAGTGAATAAAAAATAACAC  650

seq1  CTGGTTCCTCCCTAGGGAACTGACAAGTCCGCTGCTCCTGATATAAACGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTCCTCCCTAGGGAACTGACAAGTCCGCTGCTCCTGATATAAACGC  700

seq1  ACTCATTTTTGGGATTTCAGAAAGCCCATTGTGTAGTGCATAATCTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTTTTGGGATTTCAGAAAGCCCATTGTGTAGTGCATAATCTTGTG  750

seq1  AGATTCCCCACTGATAGATACATTTAGGTTCATTGATCTGTTAATATAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCCCACTGATAGATACATTTAGGTTCATTGATCTGTTAATATAGA  800

seq1  AGACTTTATTTTTCAAAATTGTGGTCCAAAAAGGGCACGTTTTTCTCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTATTTTTCAAAATTGTGGTCCAAAAAGGGCACGTTTTTCTCATT  850

seq1  ATCTAAAAACTACCATTGTTCTTTCAGAGGCTCAAGCTGTTCTTCTGATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAAACTACCATTGTTCTTTCAGAGGCTCAAGCTGTTCTTCTGATG  900

seq1  ACGTTTTTGAAATGATGAGCTTTGAGTAAGTCTCCTTAACTCCACTTCCT  950
      ||||||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  ACGTTTTTGAAATGATGAGCTTTGAGT-AGTCTCCTTAACT-CACTTCCT  948

seq1  CTGTGTGGAAACAAAGCATGACAGGATCCTTAAAATATCGTTATCAAAGA  1000
      ||||||||||   |||||||||| ||||||| |||||||||||||||   
seq2  CTGTGTGGAA--CAAGCATGACA-GATCCTT-AAATATCGTTATCAA--G  992

seq1  ATTTATTAAAAAATATAGTTATCAAAAAATTTATTAACTCCTCTGACCAT  1050
      |||||| ||||| |||||||||||||  ||      |||| ||||| |||
seq2  ATTTATAAAAAATTATAGTTATCAAACTAT------ACTCTTCTGA-CAT  1035

seq1  TTCTATTGAGA  1061
      |||||||||||
seq2  TTCTATTGAGA  1046