BAC Information

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BAC

Clone NameB6Ng01-151H04
Chromosome19 (Build37)
Map Location 14,439,431 - 14,587,313
singlet/doubletdoublet
Overlap geneEG667433, Tle4
Upstream geneOlfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505
Downstream geneEG433225, EG635497, Pomc-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151H04.bB6Ng01-151H04.g
ACCDH947263DH947264
length1,1861,151
definitionDH947263|Mus musculus domesticus DNA, BAC clone: B6Ng01-151H04, 5' end.DH947264|Mus musculus domesticus DNA, BAC clone: B6Ng01-151H04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,439,431 - 14,440,645)(14,586,153 - 14,587,313)
sequence
gaattcctgaacattcacgaggtgctcagaagctgttctgaaacccagtt
ttggctgcaagcaatctttgctacagcacaccactggcagcatgctgaac
caaaggggaatgaatttagctgactgcagcagaaaacatacgttgtgtag
ggtccaggaaagaaaataatctgtcaaagtgacaagacagatagatcaac
cttaaaactgaaggacatgcaatttctcttctgcacagtgtccagataag
agaggtcacacaaaagctataataactaaacaatgattacaacaattaaa
atatttataaaggtttcttgttactacagcatcatcatttggggttacag
ggttggcatagctcaataatatgaaaaatgaatccagttattcaatttta
aaagtaaatttaaaatactctggtttctcttaggcctgtaagatgatcag
taggtaaaggcacatgccaccaatcgcgatcatcttaagaccagaactac
agcgtggaaggagcaagccgattcctgtaaattgtcctctgacctacaca
cacacacacaaactaaatataaaaacattagttatcctggcttcactcta
agagtgatctaagataactacttagtgaggctctcagttctgattgcccc
agaaaaaagaaaagaaaagaaaagaaaagaaaagaaaagaaaagaaaaga
aaagaaaagaaaagaaaaggcttagctaagccatcacatagtccatcatc
tgtcggccgtgtcactaaaggtgctggggagagaaattatatctctgcct
tcgtgctgactgaggtgacatgtgtcagagttcagaagtgaagcaaataa
accctccaccacattagaggaaagaatagccaccatttcttcctttcagc
ttcttacgtgaatgtggaataaaaaaacaaacaaacaaaaattaaacaaa
gaagaagcagatgctatgtaagctccacatacattgtgtctggcagtgct
ccacagcagcgagtgttccacacagtgagtgctccacagcagcgagtgct
ctacacagtgagtgctcacagcagcgagtgcttcaaacagtggagtgctc
cacagcagtggaggtgcctccacagcagcgagtgtctcccacaaacagtg
agttcctccacaacatgtgagtgctcccagcagcga
gaattctttacttttgcttaaaggattttatggtaatctcttcaagttgt
gtgtaaggcaatgcctatttattctgcttcatctgtatgttagttgctta
gtctgcacagatgactaaaacatcatatgtttctgtttactttcccagtt
agtcactgttggcagtaaaggtttatcactggaaaattagaagaaggatt
ttatgttcataccgaaatgtatgattcaggccaggagagtactgttgcct
cattagcaaggtgctacaggtgagagtggcttttgagcctgaattagcag
agtgattacttctatttgccacttcactttgcacattaagatttaatggc
caaagctctgttccaagatctgtaacctgcgtgtgcttgcaccaacccgc
cctttccccaaataagcatacgatttttcctgtctcacaggtttgtctgt
ttaaaaggcatgtgctttgaacatgtttaactctttgaaatctcctaagt
gagagaaagcactgaagaagaaactggaggaatggtcaggagaggggtaa
ccatgtgcctcgggcagttttgttcttcattttactgtatggatagtagg
ctttctggaaagcatggtagggcagtttgcattactgtagattttagaaa
ggcacattgttttccccctgtactggctggttttgtgtgtcacaaaccaa
aaacttgtcacaagctggggttaccacagagaaaggagcttcgggtgagg
aaatgcctccacgagatctagctgtaaggcattttctcaattagtgatca
agggggaaaggccccttgtgggtggtgccatccctgggcaggtagtcttg
agttctataagaaagcaagctgagcaagccagggaggcaagccagtaagt
aacatcccctccatggcctctgcatcagctcctgtatctgacctgcttag
ttccagtcctgacttctttagtgatgaacagcaatgtggaagtgtagctg
aataaatccttccctccctatttgcttatggtcatgatgatttgtgcagg
gaatagaaaccctgactagacaccccctctttgtgtttgactgttctagg
actggcctgtctacaagcctgcctttcctccttatgctggaattaagcat
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14439431_14440645
seq2: B6Ng01-151H04.b_45_1230

seq1  GAATTCCTGAACATTCACGAGGTGCTCAGAAGCTGTTCTGAAACCCAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAACATTCACGAGGTGCTCAGAAGCTGTTCTGAAACCCAGTT  50

seq1  TTGGCTGCAAGCAATCTTTGCTACAGCACACCACTGGCAGCATGCTGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGCAAGCAATCTTTGCTACAGCACACCACTGGCAGCATGCTGAAC  100

seq1  CAAAGGGGAATGAATTTAGCTGACTGCAGCAGAAAACATACGTTGTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGGAATGAATTTAGCTGACTGCAGCAGAAAACATACGTTGTGTAG  150

seq1  GGTCCAGGAAAGAAAATAATCTGTCAAAGTGACAAGACAGATAGATCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAGGAAAGAAAATAATCTGTCAAAGTGACAAGACAGATAGATCAAC  200

seq1  CTTAAAACTGAAGGACATGCAATTTCTCTTCTGCACAGTGTCCAGATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAACTGAAGGACATGCAATTTCTCTTCTGCACAGTGTCCAGATAAG  250

seq1  AGAGGTCACACAAAAGCTATAATAACTAAACAATGATTACAACAATTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCACACAAAAGCTATAATAACTAAACAATGATTACAACAATTAAA  300

seq1  ATATTTATAAAGGTTTCTTGTTACTACAGCATCATCATTTGGGGTTACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATAAAGGTTTCTTGTTACTACAGCATCATCATTTGGGGTTACAG  350

seq1  GGTTGGCATAGCTCAATAATATGAAAAATGAATCCAGTTATTCAATTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGCATAGCTCAATAATATGAAAAATGAATCCAGTTATTCAATTTTA  400

seq1  AAAGTAAATTTAAAATACTCTGGTTTCTCTTAGGCCTGTAAGATGATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAATTTAAAATACTCTGGTTTCTCTTAGGCCTGTAAGATGATCAG  450

seq1  TAGGTAAAGGCACATGCCACCAATCGCGATCATCTTAAGACCAGAACTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAAAGGCACATGCCACCAATCGCGATCATCTTAAGACCAGAACTAC  500

seq1  AGCGTGGAAGGAGCAAGCCGATTCCTGTAAATTGTCCTCTGACCTACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGGAAGGAGCAAGCCGATTCCTGTAAATTGTCCTCTGACCTACACA  550

seq1  CACACACACAAACTAAATATAAAAACATTAGTTATCCTGGCTTCACTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACAAACTAAATATAAAAACATTAGTTATCCTGGCTTCACTCTA  600

seq1  AGAGTGATCTAAGATAACTACTTAGTGAGGCTCTCAGTTCTGATTGCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGATCTAAGATAACTACTTAGTGAGGCTCTCAGTTCTGATTGCCCC  650

seq1  AGAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA  700
      ||||                              ||||||||||||||||
seq2  AGAA------------------------------AAAAGAAAAGAAAAGA  670

seq1  AAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGG  720

seq1  CTTAGCTAAGCCATCACATAGTCCATCATCTGTCGGCCGTGTCACTAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTAAGCCATCACATAGTCCATCATCTGTCGGCCGTGTCACTAAAG  770

seq1  GTGCTGGGGAGAGAAATTATATCTCTGCCTTCGTGCTGACTGAGGTGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGGGAGAGAAATTATATCTCTGCCTTCGTGCTGACTGAGGTGACA  820

seq1  TGTGTCAGAGTTCAGAAGTGAAGCAAATAAACCCTCCACCACATTAGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAGAGTTCAGAAGTGAAGCAAATAAACCCTCCACCACATTAGAGG  870

seq1  AAAGAATAGCCACCATTTCTTCCTTTCAGCTTCTTACGTGAATGTGGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATAGCCACCATTTCTTCCTTTCAGCTTCTTACGTGAATGTGGAAT  920

seq1  AAAAAAACAAACAAACAAAAATTAAACAAAGAAGGAAGCAGATGCTAAGG  1000
      ||||||||||||||||||||||||||||||||| |||||||||||| | |
seq2  AAAAAAACAAACAAACAAAAATTAAACAAAGAA-GAAGCAGATGCT-ATG  968

seq1  TAAGGCTCCACATACATTGTGTCTGGCAGTGCTCCACAGCAGCGAGTGTT  1050
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAA-GCTCCACATACATTGTGTCTGGCAGTGCTCCACAGCAGCGAGTGTT  1017

seq1  CCACAACAGTGAGTGCTCCACAGCAGCGAGTGCTCTACAACAGTGAGTGC  1100
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCAC-ACAGTGAGTGCTCCACAGCAGCGAGTGCTCTAC-ACAGTGAGTGC  1065

seq1  TCCACAGCAGCGAGTGCTCCACAACAGT-GAGTGCTCCACAGCAGTG--A  1147
      | |||||||||||||||| || |||||| ||||||||||||||||||   
seq2  T-CACAGCAGCGAGTGCTTCA-AACAGTGGAGTGCTCCACAGCAGTGGAG  1113

seq1  GTG-CTCCACAGCAGCGAGTG-CT-CCAC-AACAGTGAG-TGCTCCACAA  1192
      ||| ||||||||||||||||| || |||| ||||||||| | ||||||||
seq2  GTGCCTCCACAGCAGCGAGTGTCTCCCACAAACAGTGAGTTCCTCCACAA  1163

seq1  CA-GTGAGTGCTCCACAGCAGCGA  1215
      || ||||||||||| |||||||||
seq2  CATGTGAGTGCTCC-CAGCAGCGA  1186

seq1: chr19_14586153_14587313
seq2: B6Ng01-151H04.g_69_1219 (reverse)

seq1  CATGCTTTAATTCCAGCACTAGGGAGGAAAGGCAGCCTGGTAGACAGAGC  50
      ||||| |||||||||||| || ||||||||||||| || |||||||| ||
seq2  CATGC-TTAATTCCAGCA-TAAGGAGGAAAGGCAGGCTTGTAGACAG-GC  47

seq1  AAGTTCTAGAACAGCCAAACAAACCAAAGA-GGGGTGTCTTAGTCAGGGT  99
       ||| ||||||||| ||||||   |||||| |||||||| ||||||||||
seq2  CAGTCCTAGAACAGTCAAACA---CAAAGAGGGGGTGTC-TAGTCAGGGT  93

seq1  TTCTATT-CCTGCACAAATCATCATGACCAATAAGCAAATTAGGGAGGGA  148
      ||||||| ||||||||||||||||||||| ||||||||| ||||||||||
seq2  TTCTATTCCCTGCACAAATCATCATGACC-ATAAGCAAA-TAGGGAGGGA  141

seq1  AGGATTTATTCAGCTTACACTTCCACATTGCTGTTCATCACTAAAGGAAG  198
      |||||||||||||| |||||||||||||||||||||||||||||| ||||
seq2  AGGATTTATTCAGC-TACACTTCCACATTGCTGTTCATCACTAAA-GAAG  189

seq1  TCAGGACTGGAACTAAGCAGGTCAGGATACAGGAGCTGATGCAGAGGCCA  248
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCAGGACTGGAACTAAGCAGGTCA-GATACAGGAGCTGATGCAGAGGCCA  238

seq1  TGGA-GGGATGTTACTTACTGGCTTGCCTCCCCTGGCTTGCTCAGCTTGC  297
      |||| |||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGGAGGGGATGTTACTTACTGGCTTGCCT-CCCTGGCTTGCTCAGCTTGC  287

seq1  TTTCTTATAGAACTCAAGACTACCTGCCCAGGGATGGCACCACCCACAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATAGAACTCAAGACTACCTGCCCAGGGATGGCACCACCCACAAG  337

seq1  GGGCCTTTCCCCCTTGATCACTAATTGAGAAAATGCCTTACAGCTAGATC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTTCCCCCTTGATCACTAATTGAGAAAATGCCTTACAGCTAGATC  387

seq1  TCGTGGAGGCATTTCCTCACCCGAAGCTCCTTTCTCTGTGGTAACCCCAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGGAGGCATTTCCTCACCCGAAGCTCCTTTCTCTGTGGTAACCCCAG  437

seq1  CTTGTGACAAGTTTTTGGTTTGTGACACACAAAACCAGCCAGTACAGGGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGACAAGTTTTTGGTTTGTGACACACAAAACCAGCCAGTACAGGGG  487

seq1  GAAAACAATGTGCCTTTCTAAAATCTACAGTAATGCAAACTGCCCTACCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAATGTGCCTTTCTAAAATCTACAGTAATGCAAACTGCCCTACCA  537

seq1  TGCTTTCCAGAAAGCCTACTATCCATACAGTAAAATGAAGAACAAAACTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCCAGAAAGCCTACTATCCATACAGTAAAATGAAGAACAAAACTG  587

seq1  CCCGAGGCACATGGTTACCCCTCTCCTGACCATTCCTCCAGTTTCTTCTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGGCACATGGTTACCCCTCTCCTGACCATTCCTCCAGTTTCTTCTT  637

seq1  CAGTGCTTTCTCTCACTTAGGAGATTTCAAAGAGTTAAACATGTTCAAAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTTTCTCTCACTTAGGAGATTTCAAAGAGTTAAACATGTTCAAAG  687

seq1  CACATGCCTTTTAAACAGACAAACCTGTGAGACAGGAAAAATCGTATGCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCCTTTTAAACAGACAAACCTGTGAGACAGGAAAAATCGTATGCT  737

seq1  TATTTGGGGAAAGGGCGGGTTGGTGCAAGCACACGCAGGTTACAGATCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGGGAAAGGGCGGGTTGGTGCAAGCACACGCAGGTTACAGATCTT  787

seq1  GGAACAGAGCTTTGGCCATTAAATCTTAATGTGCAAAGTGAAGTGGCAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGAGCTTTGGCCATTAAATCTTAATGTGCAAAGTGAAGTGGCAAA  837

seq1  TAGAAGTAATCACTCTGCTAATTCAGGCTCAAAAGCCACTCTCACCTGTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTAATCACTCTGCTAATTCAGGCTCAAAAGCCACTCTCACCTGTA  887

seq1  GCACCTTGCTAATGAGGCAACAGTACTCTCCTGGCCTGAATCATACATTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTTGCTAATGAGGCAACAGTACTCTCCTGGCCTGAATCATACATTT  937

seq1  CGGTATGAACATAAAATCCTTCTTCTAATTTTCCAGTGATAAACCTTTAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTATGAACATAAAATCCTTCTTCTAATTTTCCAGTGATAAACCTTTAC  987

seq1  TGCCAACAGTGACTAACTGGGAAAGTAAACAGAAACATATGATGTTTTAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACAGTGACTAACTGGGAAAGTAAACAGAAACATATGATGTTTTAG  1037

seq1  TCATCTGTGCAGACTAAGCAACTAACATACAGATGAAGCAGAATAAATAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGTGCAGACTAAGCAACTAACATACAGATGAAGCAGAATAAATAG  1087

seq1  GCATTGCCTTACACACAACTTGAAGAGATTACCATAAAATCCTTTAAGCA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGCCTTACACACAACTTGAAGAGATTACCATAAAATCCTTTAAGCA  1137

seq1  AAAGTAAAGAATTC  1161
      ||||||||||||||
seq2  AAAGTAAAGAATTC  1151