BAC Information

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BAC

Clone NameB6Ng01-152N03
Chromosome19 (Build37)
Map Location 26,121,097 - 26,225,735
singlet/doubletdoublet
Overlap gene1700048O14Rik
Upstream geneDock8, Ankrd15, LOC433233, LOC383474, Dmrt1, Dmrt3, Dmrt2, EG667806
Downstream geneLOC100041846, LOC100041857, Smarca2, Gm815, LOC100042576
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152N03.bB6Ng01-152N03.g
ACCDH948301DH948302
length1,159888
definitionDH948301|Mus musculus domesticus DNA, BAC clone: B6Ng01-152N03, 5' end.DH948302|Mus musculus domesticus DNA, BAC clone: B6Ng01-152N03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,121,097 - 26,122,257)(26,224,849 - 26,225,735)
sequence
gaggtcctcaccagcagctcatcaattcctacatgtgtggatgacccaac
ttggtcattgtgacacccattaacctgggctacttgctaacactatggga
aaccaaaccaaaacattccatctaactggagcccatttgcagatctgaaa
taaaaacaaatcctgtttcttctttcttttaagtaagtcttagggttgcc
tgttacacagccctcaatcaacaagtaactagaacgtaggtaatataacc
atgcaggtttatataatgccttgccagtgttttggggtagcacccgtgca
tagttaggtagaactcgtatattagcagtttaggttcttttctctcctct
gagcacatcaacacaatttcagttctccagggggattttttttttttgta
acccttcctggttggtagcactgaacccagatcagcaaactctcactcca
cttgggaacactctatcatcttcactctttgcacactggtgagagagaca
tacagcagggtctgccattgctgtgccaaagttcatcagagctatggttt
ttacaggttcaactaattaatttctgccaagatcttgggatctgagtgcc
atccgtcctttatggatgaaaggtcagaaattcaggaggttcaaatcact
tgctcaaggtggcagagtcaactaacagaattggaactcctaactgtgtg
atggccaaccctccatgctcttttgtggggtcctcatctgggtctcctgg
ccttcaagggacttgacactgccactcactctcaccccatgttgtgccac
atttgtggtctctcatctaaaggcaggttcatgatcagctgactttttat
gcggtggtgggaaagtgttttccgttacattgatatggtaccacaactca
cactaagcttttggtttacgagaaaaactttgagagaataaaatactata
gcatgataaattggtgtattctacataaacatgtatgttgtgtgtacccc
acatatgtaatatgtatttgttgttctatcataataatataaagattctg
catataggttattattagttgctttgtatataaattatatccaatttatt
catgcctattataatgaaatacatatcttgtaccatataaaggaaacacc
catttacct
gaattctccacacgtatggaaggattcgaaattctcttctgccttttgcc
ttcttacttttcatggtttcaatgaaaccatggcaatttctgattgatta
aaggagaaagatgtcagaactttgcttcccgtggcactagcatggagtcg
ggctgtaagcagggcaggtgggcttgtgcagctctttagttgctgataac
tacgtatgattgccaatactttcctgctccaggggcagaatgagcctagc
caagctccccactagagtagcaaaggtttatcagacagatctgctttcct
ttctgcttagcacttggctttctcatcatgaggccattcaatatcaattt
aaaaggaaaaaatttaagcaaacagaaatcacagataaagaaaactagtg
agtatcccagttccaccaaggctcctagatgttgtaagtatataacattc
cctttttctgtctctgttatcatttcaggactgaaaatggggaagtagct
cttgcgcaacatggcaagagccatgtcttgggtttgatccctagcaccac
aggataaaactaagaaaaaacatctcttccagtattggtgccaccccctt
tcttcctatgtctgtctgtctgtctgtctgtctgtctgtctgtctctctc
tctctctctctctcctttaatgcctgcttacaatagtactaaagtcaatt
aattttataagattgtcccaaataatgtttaataatattcaatagactcc
catctaaattttctttttcttctgtttaatagagacattttccatcagta
cagagaatgaactcttcattagcgctggtcttgggaagatgagaactatg
tgtgtgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_26121097_26122257
seq2: B6Ng01-152N03.b_60_1218

seq1  GAGGTCCTCACCAGCAGCTCATCAATTCCTACATGTGTGGATGACCCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCTCACCAGCAGCTCATCAATTCCTACATGTGTGGATGACCCAAC  50

seq1  TTGGTCATTGTGACACCCATTAACCTGGGCTACTTGCTAACACTATGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCATTGTGACACCCATTAACCTGGGCTACTTGCTAACACTATGGGA  100

seq1  AACCAAACCAAAACATTCCATCTAACTGGAGCCCATTTGCAGATCTGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACCAAAACATTCCATCTAACTGGAGCCCATTTGCAGATCTGAAA  150

seq1  TAAAAACAAATCCTGTTTCTTCTTTCTTTTAAGTAAGTCTTAGGGTTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAAATCCTGTTTCTTCTTTCTTTTAAGTAAGTCTTAGGGTTGCC  200

seq1  TGTTACACAGCCCTCAATCAACAAGTAACTAGAACGTAGGTAATATAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACACAGCCCTCAATCAACAAGTAACTAGAACGTAGGTAATATAACC  250

seq1  ATGCAGGTTTATATAATGCCTTGCCAGTGTTTTGGGGTAGCACCCGTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGTTTATATAATGCCTTGCCAGTGTTTTGGGGTAGCACCCGTGCA  300

seq1  TAGTTAGGTAGAACTCGTATATTAGCAGTTTAGGTTCTTTTCTCTCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGGTAGAACTCGTATATTAGCAGTTTAGGTTCTTTTCTCTCCTCT  350

seq1  GAGCACATCAACACAATTTCAGTTCTCCAGGGGGATTTTTTTTTTTTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACATCAACACAATTTCAGTTCTCCAGGGGGATTTTTTTTTTTTGTA  400

seq1  ACCCTTCCTGGTTGGTAGCACTGAACCCAGATCAGCAAACTCTCACTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCCTGGTTGGTAGCACTGAACCCAGATCAGCAAACTCTCACTCCA  450

seq1  CTTGGGAACACTCTATCATCTTCACTCTTTGCACACTGGTGAGAGAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAACACTCTATCATCTTCACTCTTTGCACACTGGTGAGAGAGACA  500

seq1  TACAGCAGGGTCTGCCATTGCTGTGCCAAAGTTCATCAGAGCTATGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAGGGTCTGCCATTGCTGTGCCAAAGTTCATCAGAGCTATGGTTT  550

seq1  TTACAGGTTCAACTAATTAATTTCTGCCAAGATCTTGGGATCTGAGTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGTTCAACTAATTAATTTCTGCCAAGATCTTGGGATCTGAGTGCC  600

seq1  ATCCGTCCTTTATGGATGAAAGGTCAGAAATTCAGGAGGTTCAAATCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGTCCTTTATGGATGAAAGGTCAGAAATTCAGGAGGTTCAAATCACT  650

seq1  TGCTCAAGGTGGCAGAGTCAACTAACAGAATTGGAACTCCTAACTGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAAGGTGGCAGAGTCAACTAACAGAATTGGAACTCCTAACTGTGTG  700

seq1  ATGGCCAACCCTCCATGCTCTTTTGTGGGGTCCTCATCTGGGTCTCCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCAACCCTCCATGCTCTTTTGTGGGGTCCTCATCTGGGTCTCCTGG  750

seq1  CCTTCAAGGGACTTGACACTGCCACTCACTCTCACCCCATGTTGTGCCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAGGGACTTGACACTGCCACTCACTCTCACCCCATGTTGTGCCAC  800

seq1  ATTTGTGGTCTCTCATCTAAAGGCAGGTTCATGATCAGCTGAC-TTTTAT  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATTTGTGGTCTCTCATCTAAAGGCAGGTTCATGATCAGCTGACTTTTTAT  850

seq1  GCGGTGGTGGGAAAGTGTTTTCCGTTACATTGATATGGTACCACAACTCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTGGTGGGAAAGTGTTTTCCGTTACATTGATATGGTACCACAACTCA  900

seq1  CACTTAGGCTTTTGGTTTACGAGAAAATACTTTGAGAGAATAAAATACTA  949
      ||| || |||||||||||||||||||| ||||||||||||||||||||||
seq2  CAC-TAAGCTTTTGGTTTACGAGAAAA-ACTTTGAGAGAATAAAATACTA  948

seq1  TAGCATGATAAATTGGTGTATTCTACATACACATGTATGTTGTGTGTA-C  998
      ||||||||||||||||||||||||||||| |||||||||||||||||| |
seq2  TAGCATGATAAATTGGTGTATTCTACATAAACATGTATGTTGTGTGTACC  998

seq1  ACACATATGTAATAATGTATATG-TGTTCTATCAGTATAAATAT-AAGAT  1046
       |||||||||||| |||||| || |||||||||| ||  ||||| |||||
seq2  CCACATATGTAAT-ATGTATTTGTTGTTCTATCA-TAATAATATAAAGAT  1046

seq1  TCTGCATATAGGTTATATATAAATTTGCTTGATATA-AAATTATATACAA  1095
      |||||||||||||||| |||  | ||||||  |||| ||||||||| |||
seq2  TCTGCATATAGGTTAT-TAT-TAGTTGCTTTGTATATAAATTATATCCAA  1094

seq1  TTTTATTCATGCCTATTAT-ATGAAATACATA-CTTGTAACATATATAAG  1143
       |||||||||||||||||| |||||||||||| |||||| |||||| |||
seq2  -TTTATTCATGCCTATTATAATGAAATACATATCTTGTACCATATA-AAG  1142

seq1  AGAACATACCATTTACCT  1161
        ||||  ||||||||||
seq2  GAAACA-CCCATTTACCT  1159

seq1: chr19_26224849_26225735
seq2: B6Ng01-152N03.g_68_955 (reverse)

seq1  CACACACACACACACACACACACACAGACAGACACACACATAGTTCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACAGACAGACACACACATAGTTCTCAT  50

seq1  CTT-CCAAGACCAGCGCTAATGAAGAGTTCATTCTCTGTACTGATGGAAA  99
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAAGACCAGCGCTAATGAAGAGTTCATTCTCTGTACTGATGGAAA  100

seq1  ATGTCTCTATTAAACAGAAGAAAAAGAAAATTTAGATGGGAGTCTATTGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCTATTAAACAGAAGAAAAAGAAAATTTAGATGGGAGTCTATTGA  150

seq1  ATATTATTAAACATTATTTGGGACAATCTTATAAAATTAATTGACTTTAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATTAAACATTATTTGGGACAATCTTATAAAATTAATTGACTTTAG  200

seq1  TACTATTGTAAGCAGGCATTAAAGGAGAGAGAGAGAGAGAGAGAGACAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTGTAAGCAGGCATTAAAGGAGAGAGAGAGAGAGAGAGAGACAGA  250

seq1  CAGACAGACAGACAGACAGACAGACAGACATAGGAAGAAAGGGGGTGGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGACAGACAGACAGACAGACAGACATAGGAAGAAAGGGGGTGGCA  300

seq1  CCAATACTGGAAGAGATGTTTTTTCTTAGTTTTATCCTGTGGTGCTAGGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATACTGGAAGAGATGTTTTTTCTTAGTTTTATCCTGTGGTGCTAGGG  350

seq1  ATCAAACCCAAGACATGGCTCTTGCCATGTTGCGCAAGAGCTACTTCCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACCCAAGACATGGCTCTTGCCATGTTGCGCAAGAGCTACTTCCCC  400

seq1  ATTTTCAGTCCTGAAATGATAACAGAGACAGAAAAAGGGAATGTTATATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGTCCTGAAATGATAACAGAGACAGAAAAAGGGAATGTTATATA  450

seq1  CTTACAACATCTAGGAGCCTTGGTGGAACTGGGATACTCACTAGTTTTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAACATCTAGGAGCCTTGGTGGAACTGGGATACTCACTAGTTTTCT  500

seq1  TTATCTGTGATTTCTGTTTGCTTAAATTTTTTCCTTTTAAATTGATATTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTGATTTCTGTTTGCTTAAATTTTTTCCTTTTAAATTGATATTG  550

seq1  AATGGCCTCATGATGAGAAAGCCAAGTGCTAAGCAGAAAGGAAAGCAGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCTCATGATGAGAAAGCCAAGTGCTAAGCAGAAAGGAAAGCAGAT  600

seq1  CTGTCTGATAAACCTTTGCTACTCTAGTGGGGAGCTTGGCTAGGCTCATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGATAAACCTTTGCTACTCTAGTGGGGAGCTTGGCTAGGCTCATT  650

seq1  CTGCCCCTGGAGCAGGAAAGTATTGGCAATCATACGTAGTTATCAGCAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCTGGAGCAGGAAAGTATTGGCAATCATACGTAGTTATCAGCAAC  700

seq1  TAAAGAGCTGCACAAGCCCACCTGCCCTGCTTACAGCCCGACTCCATGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGCTGCACAAGCCCACCTGCCCTGCTTACAGCCCGACTCCATGCT  750

seq1  AGTGCCACGGGAAGCAAAGTTCTGACATCTTTCTCCTTTAATCAATCAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCACGGGAAGCAAAGTTCTGACATCTTTCTCCTTTAATCAATCAGA  800

seq1  AATTGCCATGGTTTCATTGAAACCATGAAAAGTAAGAAGGCAAAAGGCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCCATGGTTTCATTGAAACCATGAAAAGTAAGAAGGCAAAAGGCAG  850

seq1  AAGAGAATTTCGAATCCTTCCATACGTGTGGAGAATTC  887
      ||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAATTTCGAATCCTTCCATACGTGTGGAGAATTC  888