BAC Information

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BAC

Clone NameB6Ng01-154B12
Chromosome19 (Build37)
Map Location 37,127,763 - 37,335,667
singlet/doubletdoublet
Overlap geneCpeb3, March5, LOC668230
Upstream geneHtr7, Rpp30, Ankrd1, LOC668195, Pcgf5, LOC668201, Hectd2, LOC668215, Ppp1r3c, Tnks2, Fgfbp3, Btaf1
Downstream geneIde, LOC100043010, Kif11, EG667490, LOC631069, Hhex, Exoc6, Cyp26c1, Cyp26a1, LOC668248, LOC668251, LOC209281, Fer1l3, Cep55, Gpr120, Rbp4, Pde6c, 5730455O13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154B12.bB6Ng01-154B12.g
ACCDH949231DH949232
length1,200796
definitionDH949231|Mus musculus domesticus DNA, BAC clone: B6Ng01-154B12, 5' end.DH949232|Mus musculus domesticus DNA, BAC clone: B6Ng01-154B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,127,763 - 37,128,984)(37,334,872 - 37,335,667)
sequence
gaattcttcagcgttttctgtgtagctcaggctggctttgtattcactca
gtaagtggtagctcaggcaagagtcaggtttaaaaagcatcttgtgtcag
actccagagtgcgtggctgacaggcatgtgtcactgctcatgacttgtct
ccaggtttaaacagtgaagcatcggttcaataccccctcaagtctctagt
tcattaggactcagcttgccctcagcagcacaactgttttatccttggaa
acaaaacagcagcagcagcagaggttgggccaggtggtacaggcctgcaa
tctcagccacttgaaagtttggggaaggaggattccaaggcctgcctggt
ctacacagtgagtccaggccagcctggcaactctgtgaggctgtcagaat
aaatgcggaaggtgggctgaggatatgaacacttgtctagttgtgtcaag
tcatgggttcaatccccagtactacaccaaacacccaccacaaaacaaga
gcttctccaaaatcatgattaaaaaattatcattcatttctggaactcat
aagaactagtcagatcccacctggctgggaaggcttagaggcagaagttg
attcccaggcacagtccccagccacagcttggcttctgattgcctaggca
cccagacacatgggcagacttctgacagggtgcctgtcgtctgaaacaac
actaagtggcatgagcgtgcacactgccagatattattattttaaacatg
tgggtataaaggaaagaactaaatagacctcaccctttccacagaatggt
ttaatgaaatcgactcccacaccacaaggatacacagcatttgggggaga
ttctcaaccattaagcccgtcgctcagtgaactgccatggcaggcttccc
ttgaggctgagggtggctgactgggagagccagagctaatgcattgggga
cttcagcgcttttgctgtgctgtttctattccactcacagctcgaagggg
tcgtggactcccccacaagaatagtttctggggtccaaggctgaagagca
tcatacaagtcctgtcaccttaggtcaggtcgattttgcactgaaaaaaa
ggcgttacttggtccttactcattccatcactccaaatggaatagaatga
tcaagaccacccaacccactgtgctttttacacactcaagttccaacaaa

gaattctttgtggcttactcatgtcttgctctctcctgctgggttacttt
acagaatctcctcttttccaacagaggctgatggatcaatcaattgaaag
ctgagcccagcaggtgagggaaaactcccgtctttgtcatggcgcgtgtc
cactcctcaaggccatggagattcggaccgaagggttccagagatcgcgt
ggtgaggccgtgtggagtttgccatgcaggggagctcccagcaccaagca
tctgccagcaaagagcccaacttgaaccttggaaaactgtgtcctctctt
cccaagtgttccactgagccactgacttctccaggagtcattcagattct
aatcgtaacccttgaagcagccatttctttctgtgctgtggaagctgaac
ttgctaaagcagctaggattggtcccctggtggtcttggccagttcttgg
acaacgaggctatagccaggtccttaggcagagtcttgagccagtacagg
tccatgcttcccagcggggatggatttcttttcggacatacctcgtagaa
actggtttgtctggagctccatcacttgtgctatactgcctgggcagagg
gaaagaccacaggggaggcggtggctgtgccgggcagggagacctcacag
ctattgtgctccatggaacagcccaggccctgccatcctgcatggatgtt
ttgtttagtcaaggctggctgaccccaaagcggggaattattattgtaac
atgtgtttggtggaagggcgatgttgggagacggtgggaggggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_37127763_37128984
seq2: B6Ng01-154B12.b_44_1243

seq1  GAATTCTTCAGCGTTTTCTGTGTAGCTCAGGCTGGCTTTGTATTCACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGCGTTTTCTGTGTAGCTCAGGCTGGCTTTGTATTCACTCA  50

seq1  GTAAGTGGTAGCTCAGGCAAGAGTCAGGTTTAAAAAGCATCTTGTGTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTGGTAGCTCAGGCAAGAGTCAGGTTTAAAAAGCATCTTGTGTCAG  100

seq1  ACTCCAGAGTGCGTGGCTGACAGGCATGTGTCACTGCTCATGACTTGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGAGTGCGTGGCTGACAGGCATGTGTCACTGCTCATGACTTGTCT  150

seq1  CCAGGTTTAAACAGTGAAGCATCGGTTCAATACCCCCTCAAGTCTCTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTTAAACAGTGAAGCATCGGTTCAATACCCCCTCAAGTCTCTAGT  200

seq1  TCATTAGGACTCAGCTTGCCCTCAGCAGCACAACTGTTTTATCCTTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGGACTCAGCTTGCCCTCAGCAGCACAACTGTTTTATCCTTGGAA  250

seq1  ACAAAACAGCAGCAGCAGCAGAGGTTGGGCCAGGTGGTACAGGCCTGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAGCAGCAGCAGCAGAGGTTGGGCCAGGTGGTACAGGCCTGCAA  300

seq1  TCTCAGCCACTTGAAAGTTTGGGGAAGGAGGATTCCAAGGCCTGCCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCCACTTGAAAGTTTGGGGAAGGAGGATTCCAAGGCCTGCCTGGT  350

seq1  CTACACAGTGAGTCCAGGCCAGCCTGGCAACTCTGTGAGGCTGTCAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAGTGAGTCCAGGCCAGCCTGGCAACTCTGTGAGGCTGTCAGAAT  400

seq1  AAATGCGGAAGGTGGGCTGAGGATATGAACACTTGTCTAGTTGTGTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCGGAAGGTGGGCTGAGGATATGAACACTTGTCTAGTTGTGTCAAG  450

seq1  TCATGGGTTCAATCCCCAGTACTACACCAAACACCCACCACAAAACAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGTTCAATCCCCAGTACTACACCAAACACCCACCACAAAACAAGA  500

seq1  GCTTCTCCAAAATCATGATTAAAAAATTATCATTCATTTCTGGAACTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCCAAAATCATGATTAAAAAATTATCATTCATTTCTGGAACTCAT  550

seq1  AAGAACTAGTCAGATCCCACCTGGCTGGGAAGGCTTAGAGGCAGAAGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTAGTCAGATCCCACCTGGCTGGGAAGGCTTAGAGGCAGAAGTTG  600

seq1  ATTCCCAGGCACAGTCCCCAGCCACAGCTTGGCTTCTGATTGCCTAGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGGCACAGTCCCCAGCCACAGCTTGGCTTCTGATTGCCTAGGCA  650

seq1  CCCAGACACATGGGCAGACTTCTGACAGGGTGCCTGTCGTCTGAAACAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACACATGGGCAGACTTCTGACAGGGTGCCTGTCGTCTGAAACAAC  700

seq1  ACTAAGTGGCATGAGCGTGCACACTGCCAGATATTATTATTTTAAACATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTGGCATGAGCGTGCACACTGCCAGATATTATTATTTTAAACATG  750

seq1  TGGGTATAAAGGAAAGAACTAAATAGACCTCACCCTTTCCACAGAATGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTATAAAGGAAAGAACTAAATAGACCTCACCCTTTCCACAGAATGGT  800

seq1  TTAATGAAATCGACTCCCACACCACAAGGATACACAGCATTTGGGGGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAAATCGACTCCCACACCACAAGGATACACAGCATTTGGGGGAGA  850

seq1  TTCTCAACCATT-AGGCCGTCGCTCAGTGAACTGCCATGGCAGGCTTCCC  899
      |||||||||||| || ||||||||||||||||||||||||||||||||||
seq2  TTCTCAACCATTAAGCCCGTCGCTCAGTGAACTGCCATGGCAGGCTTCCC  900

seq1  TTTGAGGCTGAGGGTGGCTGACT-GGAGAGCCAGAGCTAAGGCATTGGGG  948
       |||||||||||||||||||||| |||||||||||||||| |||||||||
seq2  -TTGAGGCTGAGGGTGGCTGACTGGGAGAGCCAGAGCTAATGCATTGGGG  949

seq1  AC-TCAGCGCTTTTGCTGTGCTGTTTCTATTTCCACTCACCAGCTCGAAG  997
      || |||||||||||||||||||||||||| ||||||||| ||||||||||
seq2  ACTTCAGCGCTTTTGCTGTGCTGTTTCTA-TTCCACTCA-CAGCTCGAAG  997

seq1  GGGTCGTGGAACTCCCCCAACAAAGATAGTTTTTCTGGGGTCCAAAGGCT  1047
      ||||||||| |||||||| ||||  ||||  |||||||||||| ||||||
seq2  GGGTCGTGG-ACTCCCCC-ACAAGAATAG--TTTCTGGGGTCC-AAGGCT  1042

seq1  G-AGAGCCATCCATTACAAAGTCACTGTCA-CTTAGGTTCCACGGTCGGA  1095
      | |||| ||||   ||| ||||| |||||| |||||||  || |||||  
seq2  GAAGAG-CATC--ATAC-AAGTC-CTGTCACCTTAGGT--CA-GGTCGAT  1084

seq1  TTTGCACCTGAAAAAAAGGCGTTTACTTGGTCCTTACTTCATTTCCATCA  1145
      |||||| |||||||||||||| ||||||||||||||| ||| ||||||| 
seq2  TTTGCA-CTGAAAAAAAGGCG-TTACTTGGTCCTTAC-TCA-TTCCATC-  1129

seq1  ACTCCAAATGAGAATAAGATGACTCAAGACACACCACACCCACTGTGCAT  1195
      |||||||||| |||||  |||| ||||||| ||||  ||||||||||| |
seq2  ACTCCAAATG-GAATAGAATGA-TCAAGAC-CACCCAACCCACTGTGC-T  1175

seq1  TTTTACAACATCCAAGTTCCAAACAAA  1222
      |||||| |||  |||||||| ||||||
seq2  TTTTAC-ACACTCAAGTTCC-AACAAA  1200

seq1: chr19_37334872_37335667
seq2: B6Ng01-154B12.g_70_865 (reverse)

seq1  TCTCCCCTCCCACCGTCTCCCAACATCGCCCTTCCACCAAACACATGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCTCCCACCGTCTCCCAACATCGCCCTTCCACCAAACACATGTTA  50

seq1  CAATAATAATTCCCCGCTTTGGGGTCAGCCAGCCTTGACTAAACAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATAATTCCCCGCTTTGGGGTCAGCCAGCCTTGACTAAACAAAACA  100

seq1  TCCATGCAGGATGGCAGGGCCTGGGCTGTTCCATGGAGCACAATAGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCAGGATGGCAGGGCCTGGGCTGTTCCATGGAGCACAATAGCTGT  150

seq1  GAGGTCTCCCTGCCCGGCACAGCCACCGCCTCCCCTGTGGTCTTTCCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTCCCTGCCCGGCACAGCCACCGCCTCCCCTGTGGTCTTTCCCTC  200

seq1  TGCCCAGGCAGTATAGCACAAGTGATGGAGCTCCAGACAAACCAGTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGGCAGTATAGCACAAGTGATGGAGCTCCAGACAAACCAGTTTCT  250

seq1  ACGAGGTATGTCCGAAAAGAAATCCATCCCCGCTGGGAAGCATGGACCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGGTATGTCCGAAAAGAAATCCATCCCCGCTGGGAAGCATGGACCTG  300

seq1  TACTGGCTCAAGACTCTGCCTAAGGACCTGGCTATAGCCTCGTTGTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGCTCAAGACTCTGCCTAAGGACCTGGCTATAGCCTCGTTGTCCAA  350

seq1  GAACTGGCCAAGACCACCAGGGGACCAATCCTAGCTGCTTTAGCAAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGCCAAGACCACCAGGGGACCAATCCTAGCTGCTTTAGCAAGTTC  400

seq1  AGCTTCCACAGCACAGAAAGAAATGGCTGCTTCAAGGGTTACGATTAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCACAGCACAGAAAGAAATGGCTGCTTCAAGGGTTACGATTAGAA  450

seq1  TCTGAATGACTCCTGGAGAAGTCAGTGGCTCAGTGGAACACTTGGGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATGACTCCTGGAGAAGTCAGTGGCTCAGTGGAACACTTGGGAAGA  500

seq1  GAGGACACAGTTTTCCAAGGTTCAAGTTGGGCTCTTTGCTGGCAGATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACACAGTTTTCCAAGGTTCAAGTTGGGCTCTTTGCTGGCAGATGCT  550

seq1  TGGTGCTGGGAGCTCCCCTGCATGGCAAACTCCACACGGCCTCACCACGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTGGGAGCTCCCCTGCATGGCAAACTCCACACGGCCTCACCACGC  600

seq1  GATCTCTGGAACCCTTCGGTCCGAATCTCCATGGCCTTGAGGAGTGGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTGGAACCCTTCGGTCCGAATCTCCATGGCCTTGAGGAGTGGACA  650

seq1  CGCGCCATGACAAAGACGGGAGTTTTCCCTCACCTGCTGGGCTCAGCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGCCATGACAAAGACGGGAGTTTTCCCTCACCTGCTGGGCTCAGCTTT  700

seq1  CAATTGATTGATCCATCAGCCTCTGTTGGAAAAGAGGAGATTCTGTAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGATTGATCCATCAGCCTCTGTTGGAAAAGAGGAGATTCTGTAAAG  750

seq1  TAACCCAGCAGGAGAGAGCAAGACATGAGTAAGCCACAAAGAATTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCAGCAGGAGAGAGCAAGACATGAGTAAGCCACAAAGAATTC  796