BAC Information

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BAC

Clone NameB6Ng01-155L19
Chromosome19 (Build37)
Map Location 36,911,885 - 37,078,081
singlet/doubletdoublet
Overlap geneTnks2, Fgfbp3, Btaf1
Upstream geneA830019P07Rik, Htr7, Rpp30, Ankrd1, LOC668195, Pcgf5, LOC668201, Hectd2, LOC668215, Ppp1r3c
Downstream geneCpeb3, March5, LOC668230, Ide, LOC100043010, Kif11, EG667490, LOC631069, Hhex, Exoc6, Cyp26c1, Cyp26a1, LOC668248, LOC668251, LOC209281, Fer1l3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155L19.bB6Ng01-155L19.g
ACCDH950436DH950437
length1,1031,008
definitionDH950436|Mus musculus domesticus DNA, BAC clone: B6Ng01-155L19, 5' end.DH950437|Mus musculus domesticus DNA, BAC clone: B6Ng01-155L19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,076,967 - 37,078,081)(36,911,885 - 36,912,893)
sequence
gaattctgaacggtcagtttttcagtagtgctcttgaattctggatgctg
aggggttaagaccagtgctggatggttgcagagcttacgtaaatattgta
acgcctttaaaggggaaaacagctgtgtaagtgcgctttcatagctcaag
tgtctgtaattttgtatcctttcctccccagtccatttatctagaaaatt
cctactcagtgttcaagacccggttcagagcaagatggatcagcccataa
agcatggggcccagagctcagatctcagaacctacattaaaggggaagaa
gtgaacacagggactgcctctaattccagtggaattacagtggtggaggg
acattagggagtccctaaccagagaagcctgaacagcaagctttgaggct
caacaggatcccctcattatgcaacgtggggagccatcaagaagatacta
gctgggtggcacccgcctttaatcccagcacttgagaggcaggggcaagc
agatatctgaatttgaggccagcctggtctacaaagtgaaactccgtctt
gacaaacaaaaaagaaaaaggggaaaaaaaaaaaagctactgtccgctac
agatgagcacatacagattgcacccaacactgcactgcactgcacttcat
tactttctgaaaagtaagatcctgcattctaaagccctcttttcatttaa
cacaaatgtgtgttacattctataaggtagatattaaaaacattttccca
ttgcgaatattaacatgagctgggtgtggtggcacatgcttgtaatgcca
gcactctagaggcaaacacaggggatttgaggacagaggctcgtgtacca
tttgcacggtgtccgtgtagcctgagctttacaaggctgcctctcacaga
caaaccaggaaagagtaatgggtactttgatatttttcatgttattttca
gtgttgaaaaaagagaatatgcactttagtcttctctataaaaaacagcc
tcattaaagaacattctttattcttaaagtagtctataacttctactgga
atacatgactgtcgctttaggtttgttttcagttttttctgaagtgcagc
tga
gaattcattcttttagagaaaaaaaaaaaaaaaaaaaaagagcccagcag
tggtggcgcaggcctttaatcccagcacttgggaggcagagacaggcgga
tttctgagttcgaggccagcctggtctacaaagtgagttccaggacagcc
agggctacacagagaaaccctatctcggggaaaaaaaaagagttagtgct
gagaaaaaaaattattaaaatagccagttaaagtttagaggtttaattaa
ggagtctagaggtttgtcagtaggaataagatatattcatgctacagaga
aggaaaaagggttttgtatttccatcctggccaaagaaaaaattaaaaat
caaccttaatttagttaatcagttgtcactccttagaggaattaagttcc
attagtgataaagataattacagaaatgggtatttttcttccgttagctg
ccttttattattgggctaggttacatacttctgatatgatctttaagaaa
tctttataaggaaacagttacacagaaaagatttcctcttccatctcttc
ttttccctgcctccaactacacagatgcaggatatgaattgattcttttc
tttttcaccaagttctttctttgggggagactttggcctttctataacca
cctttatgaatgcttgtttacctgtgatgagatgggaatcattcttctaa
aagtacatatgttaaatgattttacaatgaagaagaatactaaactaatt
tttccttattctgattcttttactctgcaatttaagaagccttttttaaa
gcatttcttctcaggtgggtttctaaaagatgcagagggctcaatagtag
aacaaaggacacatgaatgccaagaggtgatggatggcaagagaagacct
catagcagtatttactgtctccttgaagatttccttatggcttctggtac
cattctagctttctaatacaggggtatagtaagcaacatcagccacatta
aatgtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_37076967_37078081
seq2: B6Ng01-155L19.b_45_1147 (reverse)

seq1  TCAGCTGCACTTTCAGAAGAAACTGAAAAACCAAAACTTAAAGCGACAGG  50
      |||||||||| ||||||| ||||||||||    |||| |||||||||| |
seq2  TCAGCTGCAC-TTCAGAAAAAACTGAAAA---CAAACCTAAAGCGACA-G  45

seq1  TCATGTATTCCAGGTAGAGGTTATAGACTACTTTTAAGAATTAAAGAATG  100
      |||||||||||| ||||| |||||||||||| |||||||| |||||||||
seq2  TCATGTATTCCA-GTAGAAGTTATAGACTAC-TTTAAGAA-TAAAGAATG  92

seq1  TTCTTTAATGGGGGCTG-TTTTTATAGAGAAGACTAAAGTGCATATTCCT  149
      ||||||||| | ||||| ||||||||||||||||||||||||||||   |
seq2  TTCTTTAAT-GAGGCTGTTTTTTATAGAGAAGACTAAAGTGCATAT---T  138

seq1  CTTTTTTTTCAACACTGAAAATAACATGAAAAATATCAAAGTACCCATTT  199
      || |||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTCTTTTTTCAACACTGAAAATAACATGAAAAATATCAAAGTACCCA-TT  187

seq1  ACTCTTTCCTGGTTTGTCTGTGAGAGGCAGCCTTGTAAAGCTCAGGCTAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTCCTGGTTTGTCTGTGAGAGGCAGCCTTGTAAAGCTCAGGCTAC  237

seq1  ACGGACACCGTGCAAATGGTACACGAGCCTCTGTCCTCGAATCCCCTGTG  299
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACGGACACCGTGCAAATGGTACACGAGCCTCTGTCCTCAAATCCCCTGTG  287

seq1  TTTGCCTCTAGAGTGCTGGCATTACAAGCATGTGCCACCACACCCAGCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTCTAGAGTGCTGGCATTACAAGCATGTGCCACCACACCCAGCTC  337

seq1  ATGTTAATATTCGCAATGGGAAAATGTTTTTAATATCTACCTTATAGAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAATATTCGCAATGGGAAAATGTTTTTAATATCTACCTTATAGAAT  387

seq1  GTAACACACATTTGTGTTAAATGAAAAGAGGGCTTTAGAATGCAGGATCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACACATTTGTGTTAAATGAAAAGAGGGCTTTAGAATGCAGGATCT  437

seq1  TACTTTTCAGAAAGTAATGAAGTGCAGTGCAGTGCAGTGTTGGGTGCAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTCAGAAAGTAATGAAGTGCAGTGCAGTGCAGTGTTGGGTGCAAT  487

seq1  CTGTATGTGCTCATCTGTAGCGGACAGTAGCTTTTTTTTTTTTCCCCTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGTGCTCATCTGTAGCGGACAGTAGCTTTTTTTTTTTTCCCCTTT  537

seq1  TTCTTTTTTGTTTGTCAAGACGGAGTTTCACTTTGTAGACCAGGCTGGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTGTTTGTCAAGACGGAGTTTCACTTTGTAGACCAGGCTGGCC  587

seq1  TCAAATTCAGATATCTGCTTGCCCCTGCCTCTCAAGTGCTGGGATTAAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTCAGATATCTGCTTGCCCCTGCCTCTCAAGTGCTGGGATTAAAG  637

seq1  GCGGGTGCCACCCAGCTAGTATCTTCTTGATGGCTCCCCACGTTGCATAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGTGCCACCCAGCTAGTATCTTCTTGATGGCTCCCCACGTTGCATAA  687

seq1  TGAGGGGATCCTGTTGAGCCTCAAAGCTTGCTGTTCAGGCTTCTCTGGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGATCCTGTTGAGCCTCAAAGCTTGCTGTTCAGGCTTCTCTGGTT  737

seq1  AGGGACTCCCTAATGTCCCTCCACCACTGTAATTCCACTGGAATTAGAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTCCCTAATGTCCCTCCACCACTGTAATTCCACTGGAATTAGAGG  787

seq1  CAGTCCCTGTGTTCACTTCTTCCCCTTTAATGTAGGTTCTGAGATCTGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCTGTGTTCACTTCTTCCCCTTTAATGTAGGTTCTGAGATCTGAG  837

seq1  CTCTGGGCCCCATGCTTTATGGGCTGATCCATCTTGCTCTGAACCGGGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGCCCCATGCTTTATGGGCTGATCCATCTTGCTCTGAACCGGGTC  887

seq1  TTGAACACTGAGTAGGAATTTTCTAGATAAATGGACTGGGGAGGAAAGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACACTGAGTAGGAATTTTCTAGATAAATGGACTGGGGAGGAAAGGA  937

seq1  TACAAAATTACAGACACTTGAGCTATGAAAGCGCACTTACACAGCTGTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAATTACAGACACTTGAGCTATGAAAGCGCACTTACACAGCTGTTT  987

seq1  TCCCCTTTAAAGGCGTTACAATATTTACGTAAGCTCTGCAACCATCCAGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTTAAAGGCGTTACAATATTTACGTAAGCTCTGCAACCATCCAGC  1037

seq1  ACTGGTCTTAACCCCTCAGCATCCAGAATTCAAGAGCACTACTGAAAAAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTCTTAACCCCTCAGCATCCAGAATTCAAGAGCACTACTGAAAAAC  1087

seq1  TGACCGTTCAGAATTC  1115
      ||||||||||||||||
seq2  TGACCGTTCAGAATTC  1103

seq1: chr19_36911885_36912893
seq2: B6Ng01-155L19.g_68_1075

seq1  GAATTCATTCTTTTAGAGAAAAAAAAAAAAAAAAAAAAAGAGCCCAGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTTTTAGAGAAAAAAAAAAAAAAAAAAAAAGAGCCCAGCAG  50

seq1  TGGTGGCGCAGGCCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGCGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCGCAGGCCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGCGGA  100

seq1  TTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCC  150

seq1  AGGGCTACACAGAGAAACCCTATCTCGGGGAAAAAAAAAGAGTTAGTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTACACAGAGAAACCCTATCTCGGGGAAAAAAAAAGAGTTAGTGCT  200

seq1  GAGAAAAAAAATTATTAAAATAGCCAGTTAAAGTTTAGAGGTTTAATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAAAAATTATTAAAATAGCCAGTTAAAGTTTAGAGGTTTAATTAA  250

seq1  GGAGTCTAGAGGTTTGTCAGTAGGAATAAGATATATTCATGCTACAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTAGAGGTTTGTCAGTAGGAATAAGATATATTCATGCTACAGAGA  300

seq1  AGGAAAAAGGGTTTTGTATTTCCATCCTGGCCAAAGAAAAAATTAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAGGGTTTTGTATTTCCATCCTGGCCAAAGAAAAAATTAAAAAT  350

seq1  CAACCTTAATTTAGTTAATCAGTTGTCACTCCTTAGAGGAATTAAGTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTAATTTAGTTAATCAGTTGTCACTCCTTAGAGGAATTAAGTTCC  400

seq1  ATTAGTGATAAAGATAATTACAGAAATGGGTATTTTTCTTCCGTTAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGATAAAGATAATTACAGAAATGGGTATTTTTCTTCCGTTAGCTG  450

seq1  CCTTTTATTATTGGGCTAGGTTACATACTTCTGATATGATCTTTAAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTATTATTGGGCTAGGTTACATACTTCTGATATGATCTTTAAGAAA  500

seq1  TCTTTATAAGGAAACAGTTACACAGAAAAGATTTCCTCTTCCATCTCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATAAGGAAACAGTTACACAGAAAAGATTTCCTCTTCCATCTCTTC  550

seq1  TTTTCCCTGCCTCCAACTACACAGATGCAGGATATGAATTGATTCTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTGCCTCCAACTACACAGATGCAGGATATGAATTGATTCTTTTC  600

seq1  TTTTTCACCAAGTTC-TTCTTTGGGGGAGACTTTGGCCTTTCTATAACCA  649
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTTTCACCAAGTTCTTTCTTTGGGGGAGACTTTGGCCTTTCTATAACCA  650

seq1  CCTTTATGAATGCTTG-TTACCTGTGATGAGATGGGAATCATTCTTCTAA  698
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCTTTATGAATGCTTGTTTACCTGTGATGAGATGGGAATCATTCTTCTAA  700

seq1  AAGTACATATGTTAAATGATTTTACAATGAAGAAGAATACTAAACTAATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACATATGTTAAATGATTTTACAATGAAGAAGAATACTAAACTAATT  750

seq1  TTTCCTTATTCTGATTCTTTTACTCTGCAATTTAAGAAGCCTTTTCTAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||| | ||
seq2  TTTCCTTATTCTGATTCTTTTACTCTGCAATTTAAGAAGCCTTTT-TTAA  799

seq1  AGCATTTCTTC-CAGGTGGG-TTCTAAAAGATGCAGAGGGC-CAATAGTA  845
      ||||||||||| |||||||| |||||||||||||||||||| ||||||||
seq2  AGCATTTCTTCTCAGGTGGGTTTCTAAAAGATGCAGAGGGCTCAATAGTA  849

seq1  GAACAAAGGACACATGAATGCCAAGAGGTGATGGATGGCAAGAGAAGACC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAGGACACATGAATGCCAAGAGGTGATGGATGGCAAGAGAAGACC  899

seq1  TCATAGCAGTAATTTACTGTCTCCTTGAAGATTTCCTTCATGGCTTCTTG  945
      |||||||||| ||||||||||||||||||||||||||| |||||||| ||
seq2  TCATAGCAGT-ATTTACTGTCTCCTTGAAGATTTCCTT-ATGGCTTC-TG  946

seq1  GTACCATTCTAGCTTTCTAATACAGGGGTATAGTAAGCAAACATCAACAA  995
      |||||||||||||||||||||||||||||||||||||| ||||||| | |
seq2  GTACCATTCTAGCTTTCTAATACAGGGGTATAGTAAGC-AACATCAGCCA  995

seq1  CTATTAAATGTCTC  1009
      | ||||||||||||
seq2  C-ATTAAATGTCTC  1008