BAC Information

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BAC

Clone NameB6Ng01-156I02
Chromosome19 (Build37)
Map Location 13,559,635 - 13,728,472
singlet/doubletdoublet
Overlap geneGA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489
Upstream geneDtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475
Downstream geneOlfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156I02.bB6Ng01-156I02.g
ACCDH950992DH950993
length1,0201,080
definitionDH950992|Mus musculus domesticus DNA, BAC clone: B6Ng01-156I02, 5' end.DH950993|Mus musculus domesticus DNA, BAC clone: B6Ng01-156I02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,727,457 - 13,728,472)(13,559,635 - 13,560,726)
sequence
gaattcatgcatcaaaatcactccaagtgtgatagggaatggtttcaagt
atttattaactgatatatttatcatttattgattttgcttatatggattg
ttgtattctggggcattaagtaagtgacacataaacgacatgctcatata
tcatcacaagatgtagaatctaaagagaatggtgcaaggaaaaatgttac
tgtaaaagaaataataatgtggcaaaatcaattagacttgtcaggggttc
aaataagctgcataaatgaatcgttctactttctggtttttctgggctta
gccaaacaaaagaggcatgaggccagcacatttctgtttaatcttaggtt
tcatcctaatatattaaaatatgaccaaaactgttggagttcctagaaag
ttttctgtgagtttggacagaactgcagaaggccagtctagtgcatcttt
ccagactttccttccttttcttatagtaaatgtgtaatccagaggggaaa
tttattttccctaaaagccaaaggcaaaaaaacatgccagcataaaatca
ccaaaaatttcaatgagcaagaacaactcacaaagtgctcactatgttta
ttattattattattattattattattattattattattattattattatt
attaattatttaaatcaatttgtatttaggaagaccaatgggatgtgttt
ttataattatttcaaataaccaaattttattttttgcctattgatcaata
tgtctgcttaaagaaaactgtttccaataccctttctcaccataaatata
atctacagaataccatgtcaacatcaaacacaacctggacatctatagct
ttctttattcttatagctaggaatgacctgtttgcattcatttttgtaat
tctctaattaatttcaaaaatgctataagtaattgctcatgatacttaac
aactcttcaggttttagtataatatcaggtgggaatagtattgtatggaa
tattaaaccaatgttgattg
gaattcaaaaattgaaatcgggaaaagatagacaaaagtaagatagaaaa
acttctgtctgagatttctattttcaatggacaggtgaattcagtacaga
tatacatacctggttcagttgctgaatataagagaccaattgttcatgtc
taaatggaacatctatattaatcctaccaccactactttggcttaggaag
cattggtgaagaggagatctaaaaatataagagctagaggatggaaatta
aagctgttaaataatagcttctagacgttacatgattaatgcaatcatta
actcagcagctatacctgtctgtacaataactatacatgactaagtgaga
aaagcacctcacaaaagtctgttacatcattatagatgtaacctcttaat
cagtagctattggaaattggtatttgctgaagaagagagaaacaactttt
tgatgatgtgacaactatatatttctcattttccagcagacaggtccaca
ttcatgctggtccgaggctgctagcacatatatagcagaggtctgctagt
ctggtctcagtgtaagaaaacatacttaatccttaagaggccccagggaa
gggggagccctggggagagcaaccaccctaagttgagtggggagaagaat
gggatgagtaactgtaggagggaggaccaaggtggggcagtgattagaag
gtaaattaaaagaataatttgaagaattctcaaggaaataagaaaaatat
tagacagataggtatcatatgaactccaaaaaatacttttagatggcaaa
gcatgacatatctttttaatccctgccgaaaagatgaacaacatgaggac
acagataaaaattcactgtggttcccttgctattgactggcaaatataaa
gcacgaattattccctattatttttacaaaggtaaaacacatttttttta
cattaattccataaggtattggcaattttggtggtaacattttagacatc
atctattaaatgccaggaaactccaaagtaacacttccatgttcatcttt
ttatccaggtctttctatttaactatgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13727457_13728472
seq2: B6Ng01-156I02.b_47_1066 (reverse)

seq1  CAATCAACATTGGTTTAATATT-CATACAATACTATT-CCACCTGATATT  48
      |||||||||||||||||||||| |||||||||||||| ||||||||||||
seq2  CAATCAACATTGGTTTAATATTCCATACAATACTATTCCCACCTGATATT  50

seq1  ATACTAAAACCTGAAGAG-TGTTAAGTATCATGAGCAATTACTTATAGCA  97
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATACTAAAACCTGAAGAGTTGTTAAGTATCATGAGCAATTACTTATAGCA  100

seq1  TTTTTGAAATTAATTAGAGAATTACAAAAATGAATGCAAAACAGGTCATT  147
      ||||||||||||||||||||||||||||||||||||| |||||||||| |
seq2  TTTTTGAAATTAATTAGAGAATTACAAAAATGAATGC-AAACAGGTCA-T  148

seq1  TCCTAGCTATAAGAATAAAGAAAGCTATAGATGTCCAGGTTGTGTTTGAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGCTATAAGAATAAAGAAAGCTATAGATGTCCAGGTTGTGTTTGAT  198

seq1  GTTGACATGGTATTCTGTAGATTATATTTATGGTGAGAAAGGGTATTGGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACATGGTATTCTGTAGATTATATTTATGGTGAGAAAGGGTATTGGA  248

seq1  AACAGTTTTCTTTAAGCAGACATATTGATCAATAGGCAAAAAATAAAATT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTTCTTTAAGCAGACATATTGATCAATAGGCAAAAAATAAAATT  298

seq1  TGGTTATTTGAAATAATTATAAAAACACATCCCATTGGTCTTCCTAAATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTATTTGAAATAATTATAAAAACACATCCCATTGGTCTTCCTAAATA  348

seq1  CAAATTGATTTAAATAAT---TAATAATAATAATAATAATAATAATAATA  394
      ||||||||||||||||||   |||||||||||||||||||||||||||||
seq2  CAAATTGATTTAAATAATTAATAATAATAATAATAATAATAATAATAATA  398

seq1  ATAATAATAATAATAATAATAATAAACATAGTGAGCACTTTGTGAGTTGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATAATAATAATAATAATAAACATAGTGAGCACTTTGTGAGTTGT  448

seq1  TCTTGCTCATTGAAATTTTTGGTGATTTTATGCTGGCATGTTTTTTTGCC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTCATTGAAATTTTTGGTGATTTTATGCTGGCATGTTTTTTTGCC  498

seq1  TTTGGCTTTTAGGGAAAATAAATTTCCCCTCTGGATTACACATTTACTAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTTTTAGGGAAAATAAATTTCCCCTCTGGATTACACATTTACTAT  548

seq1  AAGAAAAGGAAGGAAAGTCTGGAAAGATGCACTAGACTGGCCTTCTGCAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGGAAGGAAAGTCTGGAAAGATGCACTAGACTGGCCTTCTGCAG  598

seq1  TTCTGTCCAAACTCACAGAAAACTTTCTAGGAACTCCAACAGTTTTGGTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCCAAACTCACAGAAAACTTTCTAGGAACTCCAACAGTTTTGGTC  648

seq1  ATATTTTAATATATTAGGATGAAACCTAAGATTAAACAGAAATGTGCTGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTAATATATTAGGATGAAACCTAAGATTAAACAGAAATGTGCTGG  698

seq1  CCTCATGCCTCTTTTGTTTGGCTAAGCCCAGAAAAACCAGAAAGTAGAAC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGCCTCTTTTGTTTGGCTAAGCCCAGAAAAACCAGAAAGTAGAAC  748

seq1  GATTCATTTATGCAGCTTATTTGAACCCCTGACAAGTCTAATTGATTTTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATTTATGCAGCTTATTTGAACCCCTGACAAGTCTAATTGATTTTG  798

seq1  CCACATTATTATTTCTTTTACAGTAACATTTTTCCTTGCACCATTCTCTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTATTATTTCTTTTACAGTAACATTTTTCCTTGCACCATTCTCTT  848

seq1  TAGATTCTACATCTTGTGATGATATATGAGCATGTCGTTTATGTGTCACT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTCTACATCTTGTGATGATATATGAGCATGTCGTTTATGTGTCACT  898

seq1  TACTTAATGCCCCAGAATACAACAATCCATATAAGCAAAATCAATAAATG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAATGCCCCAGAATACAACAATCCATATAAGCAAAATCAATAAATG  948

seq1  ATAAATATATCAGTTAATAAATACTTGAAACCATTCCCTATCACACTTGG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATATCAGTTAATAAATACTTGAAACCATTCCCTATCACACTTGG  998

seq1  AGTGATTTTGATGCATGAATTC  1016
      ||||||||||||||||||||||
seq2  AGTGATTTTGATGCATGAATTC  1020

seq1: chr19_13559635_13560726
seq2: B6Ng01-156I02.g_66_1145

seq1  GAATTCAAAAATTGAAATCGGGAAAAGATAGACAAAAGTAAGATAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAATTGAAATCGGGAAAAGATAGACAAAAGTAAGATAGAAAA  50

seq1  ACTTCTGTCTGAGATTTCTATTTTCAATGGACAGGTGAATTCAGTACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGTCTGAGATTTCTATTTTCAATGGACAGGTGAATTCAGTACAGA  100

seq1  TATACATACCTGGTTCAGTTGCTGAATATAAGAGACCAATTGTTCATGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATACCTGGTTCAGTTGCTGAATATAAGAGACCAATTGTTCATGTC  150

seq1  TAAATGGAACATCTATATTAATCCTACCACCACTACTTTGGCTTAGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGAACATCTATATTAATCCTACCACCACTACTTTGGCTTAGGAAG  200

seq1  CATTGGTGAAGAGGAGATCTAAAAATATAAGAGCTAGAGGATGGAAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGTGAAGAGGAGATCTAAAAATATAAGAGCTAGAGGATGGAAATTA  250

seq1  AAGCTGTTAAATAATAGCTTCTAGACGTTACATGATTAATGCAATCATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTTAAATAATAGCTTCTAGACGTTACATGATTAATGCAATCATTA  300

seq1  ACTCAGCAGCTATACCTGTCTGTACAATAACTATACATGACTAAGTGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCAGCTATACCTGTCTGTACAATAACTATACATGACTAAGTGAGA  350

seq1  AAAGCACCTCACAAAAGTCTGTTACATCATTATAGATGTAACCTCTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACCTCACAAAAGTCTGTTACATCATTATAGATGTAACCTCTTAAT  400

seq1  CAGTAGCTATTGGAAATTGGTATTTGCTGAAGAAGAGAGAAACAACTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGCTATTGGAAATTGGTATTTGCTGAAGAAGAGAGAAACAACTTTT  450

seq1  TGATGATGTGACAACTATATATTTCTCATTTTCCAGCAGACAGGTCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATGTGACAACTATATATTTCTCATTTTCCAGCAGACAGGTCCACA  500

seq1  TTCATGCTGGTCCGAGGCTGCTAGCACATATATAGCAGAGGTCTGCTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCTGGTCCGAGGCTGCTAGCACATATATAGCAGAGGTCTGCTAGT  550

seq1  CTGGTCTCAGTGTAAGAAAACATACTTAATCCTTAAGAGGCCCCAGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTCAGTGTAAGAAAACATACTTAATCCTTAAGAGGCCCCAGGGAA  600

seq1  GGGGGAGCCCTGGGGAGAGCAACCACCCTAAGTTGAGTGGGGAGAAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGCCCTGGGGAGAGCAACCACCCTAAGTTGAGTGGGGAGAAGAAT  650

seq1  GGGATGAGTAACTGTAGGAGGGAGGACCAAGGTGGGGCAGTGATTAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGAGTAACTGTAGGAGGGAGGACCAAGGTGGGGCAGTGATTAGAAG  700

seq1  GTAAATTAAAAGAATAATTTGAAGAATTCTCAAAGGAAATAAGAAAAATA  750
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTAAATTAAAAGAATAATTTGAAGAATTCTC-AAGGAAATAAGAAAAATA  749

seq1  TTAGACAGATAGGTATCATATGAACTCCAAAAAATACTTTTAGATGGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACAGATAGGTATCATATGAACTCCAAAAAATACTTTTAGATGGCAA  799

seq1  AGCATGACATATC-TTTTAATCCCTGCCGAAAAGATGAACAACATGAGGA  849
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGCATGACATATCTTTTTAATCCCTGCCGAAAAGATGAACAACATGAGGA  849

seq1  CACAGATAAAAATTCACTGTGGTTCCCTTGCTATTGACTGGCAAATATAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATAAAAATTCACTGTGGTTCCCTTGCTATTGACTGGCAAATATAA  899

seq1  AGCACGAATTAATTCCCTATTATTTTTACAAAGGTAAAACACA-TTTTTT  948
      |||||||||| |||||||||||||||||||||||||||||||| ||||||
seq2  AGCACGAATT-ATTCCCTATTATTTTTACAAAGGTAAAACACATTTTTTT  948

seq1  TACATTTATTTCCATAAGGTATTGCAAATTTTGTGGTTAACATTTTAGAC  998
      |||| ||| |||||||||||||||  |||||||  | |||||||||||||
seq2  TACA-TTAATTCCATAAGGTATTGGCAATTTTGGTGGTAACATTTTAGAC  997

seq1  AATCCATCCTATTAAATGCCAGGAAAACTCCAAAAAGTAAACACTTCTAT  1048
      |   ||| ||||||||||||||| |||||||  ||||| |||||||| | 
seq2  A--TCAT-CTATTAAATGCCAGG-AAACTCC--AAAGT-AACACTTCCA-  1039

seq1  TGTTCCATCTTTTTATACCAGGTCTTTCTATTTAACTATTGTGC  1092
      |||| ||||||||||| ||||||||||||||||||||| |||||
seq2  TGTT-CATCTTTTTAT-CCAGGTCTTTCTATTTAACTA-TGTGC  1080