BAC Information

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BAC

Clone NameB6Ng01-156I08
Chromosome19 (Build37)
Map Location 33,573,686 - 33,574,814
singlet/doubletsinglet
Overlap geneLOC628236
Upstream geneMinpp1, Papss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik, LOC638381, EG668095
Downstream geneAI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas, Ch25h, Lipa
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156I08.bB6Ng01-156I08.g
ACCDH951004DH951005
length7451,105
definitionDH951004|Mus musculus domesticus DNA, BAC clone: B6Ng01-156I08, 5' end.DH951005|Mus musculus domesticus DNA, BAC clone: B6Ng01-156I08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatctcgaatggctgagaagcacctaaagaaatg
tgtaacatccttagccatcagggaaatgcaaatcaaaatgaccctgagag
tccacctcacaccagtcagaatggctaagatcaaaaactcaagtgacagc
agatgctggcaaaggatttggagaaagaggaacacttctccatttttgtt
gggattgtaatctggtacaaccactctggaaatcagtttggtggtccctc
agaaaactggatacaatactacctgaggacccagctataccactcctggg
catatagcgagaagatgctccaacatataacaatgacacatgctccaata
tgtttgtggcagccttatttataatagccagaagctggaaacaacctaga
tgtccttcaacagaggaatggattcagaaaatgaggtacatttacacaat
ggagtactactcaactattagaaacaatgcctttgtgaaattcttaggca
agtgaatggaactagaaaatatcatcccgaatgaggtaacccagtcacaa
aagaacaggcctggtatgtactcagtgataagtgaatattaggaaataat
ctcagaatagccatgacacaactcagagaccatatgaagctcaagaagaa
gaaagaccaaagtgtggatgcttcagtattacttaaaagggggaacaaaa
taatcaggggaggtagagagtgggaaggattttggaggaatagag
gaattctctaggactttaatttagtagccattgatcagacaatacatatc
attaaggtataaaatgtactgggtatatgtgggccaatgtgtcattactt
tagaaagaggcaagagaactcaataaatgttggttctattaaaatctaag
gctgtgtaagtagtgggatgttttctctgtatttaagataagaagaagtg
gcatacttcaggcttatgattggggaagttcatctctgaatatgcaacac
tacaatcaggtaagtctcttcttccagatttaatgatctgattcttataa
gaggtacatagtctaagaaatctaaagtaagtcctcatttttaaaataag
actttggaaaaaaacaagatttgggacatttcatttttctcaggaagagg
gactacacagaactttgggaggaatcaaaagaataccatttttttttgta
tgatgatactgtgataatattctgtctaacgcatcatttgactctcacga
aattatgtgggatttatcagacacttattgatagagtcatttcatatgta
gagatccaggtttagaaaacttgggacttgtattatttcacgctttgaat
gacagaccactataatagggggtgggacgtagcagtgacctcaggcttca
gaatactgagaggggaggattctgccaagaaagcagcatagaatacatag
agagtaactgtgaaaaaaaactaaagtacgcaaatatataaatatatata
aataagattaaatgttacctgacaagggccaagctcaatgatttctatgg
acataatttgttattacaattattctgtcacagatgagaataagtatttt
tgttaatgttttgtcgaatgttgttaatgtttattgacttgttaatgttt
gttaacgcatgctctttgtcattttccgtcagactactcctcctgtatac
aatgtagagacatgaaggttccactgccatgtttactgtttaaagatttt
ttatctgaccagagatgttgaaattttgaacccaaattgcacctcacata
ccttaagactattcttgattagcatttgatttatgggaatatgctaggaa
gaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33573686_33574814
seq2: B6Ng01-156I08.g_66_1170 (reverse)

seq1  ACCTCTTCCCTAGCATTTAATCCCCATATAAAATCAAAATGGCTAAAATC  50
      ||||||| ||||||||   || |||||   ||||||||   |||  ||||
seq2  ACCTCTT-CCTAGCAT---ATTCCCAT---AAATCAAA--TGCT--AATC  39

seq1  AGGAATAGTCTTAAGGTATGTGAGGTTGTGGATTTTGGGTTTCAAAATTT  100
      | ||||||||||||||||||||||   ||| | |||||| ||||||||||
seq2  AAGAATAGTCTTAAGGTATGTGAG---GTGCAATTTGGG-TTCAAAATTT  85

seq1  CAACATCTTCTGGGTCAGATAAAAAATCTTTTAAACCAGTAAACATGGCA  150
      ||||||| ||| |||||||||||||||||||  || ||||||||||||||
seq2  CAACATC-TCT-GGTCAGATAAAAAATCTTT--AAACAGTAAACATGGCA  131

seq1  GTTGGAACCTTCATGTCTTCTACATTGTATACAGGAGGAGTAGTCTGACG  200
      | ||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  G-TGGAACCTTCATGTC-TCTACATTGTATACAGGAGGAGTAGTCTGACG  179

seq1  GAAAATGACAAAGAGCAATGCGTTAACAAAACATTAACAAGTCAATAAAA  250
      |||||||||||||||| |||||||||| |||||||||||||||||| |||
seq2  GAAAATGACAAAGAGC-ATGCGTTAAC-AAACATTAACAAGTCAAT-AAA  226

seq1  CATTAACAACATTCGACAAAACATTAACAAAAATACTTATTCTCATCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAACAACATTCGACAAAACATTAACAAAAATACTTATTCTCATCTGT  276

seq1  GACAGAATAATTGTAATAACAAATTATGTCCATAGAAATCATTGAGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAATAATTGTAATAACAAATTATGTCCATAGAAATCATTGAGCTTG  326

seq1  GCCCTTGTCAGGTAACATTTAATCTTATTTATATATATTTATATATTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTGTCAGGTAACATTTAATCTTATTTATATATATTTATATATTTGC  376

seq1  GTACTTTAGTTTTTTTTCACAGTTACTCTCTATGTATTCTATGCTGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTAGTTTTTTTTCACAGTTACTCTCTATGTATTCTATGCTGCTTT  426

seq1  CTTGGCAGAATCCTCCCCTCTCAGTATTCTGAAGCCTGAGGTCACTGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCAGAATCCTCCCCTCTCAGTATTCTGAAGCCTGAGGTCACTGCTA  476

seq1  CGTCCCACCCCCTATTATAGTGGTCTGTCATTCAAAGCGTGAAATAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCACCCCCTATTATAGTGGTCTGTCATTCAAAGCGTGAAATAATAC  526

seq1  AAGTCCCAAGTTTTCTAAACCTGGATCTCTACATATGAAATGACTCTATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCAAGTTTTCTAAACCTGGATCTCTACATATGAAATGACTCTATC  576

seq1  AATAAGTGTCTGATAAATCCCACATAATTTCGTGAGAGTCAAATGATGCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTGTCTGATAAATCCCACATAATTTCGTGAGAGTCAAATGATGCG  626

seq1  TTAGACAGAATATTATCACAGTATCATCATACAAAAAAAAATGGTATTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACAGAATATTATCACAGTATCATCATACAAAAAAAAATGGTATTCT  676

seq1  TTTGATTCCTCCCAAAGTTCTGTGTAGTCCCTCTTCCTGAGAAAAATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTCCTCCCAAAGTTCTGTGTAGTCCCTCTTCCTGAGAAAAATGAA  726

seq1  ATGTCCCAAATCTTGTTTTTTTCCAAAGTCTTATTTTAAAAATGAGGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCAAATCTTGTTTTTTTCCAAAGTCTTATTTTAAAAATGAGGACT  776

seq1  TACTTTAGATTTCTTAGACTATGTACCTCTTATAAGAATCAGATCATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAGATTTCTTAGACTATGTACCTCTTATAAGAATCAGATCATTAA  826

seq1  ATCTGGAAGAAGAGACTTACCTGATTGTAGTGTTGCATATTCAGAGATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGAAGAAGAGACTTACCTGATTGTAGTGTTGCATATTCAGAGATGA  876

seq1  ACTTCCCCAATCATAAGCCTGAAGTATGCCACTTCTTCTTATCTTAAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCCAATCATAAGCCTGAAGTATGCCACTTCTTCTTATCTTAAATA  926

seq1  CAGAGAAAACATCCCACTACTTACACAGCCTTAGATTTTAATAGAACCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAAACATCCCACTACTTACACAGCCTTAGATTTTAATAGAACCAA  976

seq1  CATTTATTGAGTTCTCTTGCCTCTTTCTAAAGTAATGACACATTGGCCCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTGAGTTCTCTTGCCTCTTTCTAAAGTAATGACACATTGGCCCA  1026

seq1  CATATACCCAGTACATTTTATACCTTAATGATATGTATTGTCTGATCAAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACCCAGTACATTTTATACCTTAATGATATGTATTGTCTGATCAAT  1076

seq1  GGCTACTAAATTAAAGTCCTAGAGAATTC  1129
      |||||||||||||||||||||||||||||
seq2  GGCTACTAAATTAAAGTCCTAGAGAATTC  1105