BAC Information

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BAC

Clone NameB6Ng01-157H15
Chromosome19 (Build37)
Map Location 4,631,418 - 4,632,526
singlet/doubletsinglet
Overlap genenone
Upstream geneLrp5, 1810055G02Rik, LOC100039289, Suv420h1, Chka, Tcirg1, Ndufs8, Aldh3b1, Unc93b1, LOC100039337, 1700055N04Rik, Aldh3b2, Acy3, Tbx10, Nudt8, Doc2g, Ndufv1, Gstp1, Gstp2, BC021614, Cabp2, Cdk2ap2, Pitpnm1, Aip, Tmem134, Cabp4, Gpr152, Coro1b, Ptprcap, Rps6kb2, AI790298, Tbc1d10c, Ppp1ca, Rad9, Clcf1, Pold4, Ssh3, Ankrd13d, Adrbk1, Fbxl11, LOC100043628, Rhod, Syt12, 2010003K11Rik, Pcx, Lrfn4, Rce1
Downstream geneGm960, Spnb3, Rbm4b, Rbm4, Rbm14, Ccs, Ccdc87, Ctsf, Actn3, Zdhhc24, Bbs1, Dpp3, Peli3, Mrpl11, Npas4, Slc29a2, B3gnt1, Brms1, Rin1, Cd248, Tmem151, Yif1a, Cnih2, Rab1b, Klc2, LOC383424, Pacs1, Sf3b2, Gal3st3, EG631868, Catsper1, Cst6, Banf1, 2010003J03Rik, Sart1, Tsga10ip, EG622178, Drap1, AI837181, LOC383425, Fosl1, Ccdc85b, Fibp, Ctsw, Efemp2, Mus81, Cfl1, B930037P14Rik, 1700020D05Rik, Ovol1, Gm962, Rnaseh2c, Htatip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157H15.bB6Ng01-157H15.g
ACCDH951701DH951702
length1,0911,150
definitionDH951701|Mus musculus domesticus DNA, BAC clone: B6Ng01-157H15, 5' end.DH951702|Mus musculus domesticus DNA, BAC clone: B6Ng01-157H15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactatgtagcccaggctgcttcagactctccatgccccagcctc
accctcctgggtactggggttacagctgtgcactgcaggaagccctcttc
ctcactctggcttacctgcttattcctttattaatatgatcaatgtgctc
taccttttcctttccatggtttttctttatttttatttcctattaacgtc
cacatggctctttcttatttcatttgctctgtttgtgcagcttgctcttc
tcggtccgtaagagctttggctggcacggccgccatgctgaggtaggtca
tcctctccaggcaggacaacgttagctacagtccacacattctgatcatc
tgcattttcatttcattaaattacttctaacttttctttgtccttttttt
ttttttaagatttacttacattatgtatgtgagtacactgtcttctcttc
agacacaccagaagagggcatcagatcccattacagatggttgtgagcca
ccatgtggttgctgggaattgaactcaggacctctagaagtgtagtcagt
gctcttaacccctgagccatctctccagcccctaacttttctttaacttc
atgttttatctcatttatcatttattttacaactactataaaatctttca
gatatgtttctgttattagtttttgttttagtaattctagtgtggtcaaa
atatactttggaagctggtgctatggttcagtgggcaaagggtttgttac
caagccttagttccaatcttgagcccacatggtaggagaggacagatccc
tgccagtcatcactcggattcctacatacgactgtagcaagtgtcacaga
gtaacatcaaacaccatgtacttcagagcaagctgccttcgctgatgaag
gcatttgtcgattgccaatcctcagtacccagtcagccctggaacacaca
cggaacgaggagcgcttctgcgagtggtccctgacctcgcacaagtagct
ttagaaatatttacaataattggtaattaatacgttacattgggagaatt
ctattgtctgggaacgtatctatctggatatagatctctaa
gaattcaaggccaacttgaattacaaattgagaccatgtttcaaaaacag
gtgtgtagctaagagatggttcaggggttcagagtgctaccggtcttgag
gggacctgtttggttcccagctccatgtcaggaggcacagttacagtaac
tttagcttcgggtggtttgatgctttcttacggactccacaagcatccgc
actcgcatacacacccactccaacatacacataaatacataataaaaata
aagtaagcctaggtgctagagaggcggctcaagagttatgagcagtggct
gctcttctaaaggacccaggttccgtttctagcatcctggctctcaactg
tctgtaactccagttccaagggatctaatgctttcttctaatctccacag
gcaccaggcatatgtggtgcacagacatgtgtgcaggcaaaacacccaca
ttcaaaaaataaaaaaatatattaaaagtcataattcgggactggtgaga
tggctcagtgggtaagagcacccgactgctcttccaaaggtcccgagttc
aagtcccagcaaccacatggtggctcacaaccatctgtaatgaggtctga
ctcctccttctggagtgtctgaagacagctacagtgtacttacatataat
aaataaataaataataaatcttctttaaaaagtcataattcagaataata
ttggcattcgttatgtaaaaatatttccatgagaatgtaagaattatctc
ataggacacacaccgaggttacttcaaggatttcaaaggtaatagtactt
ttattggcgcttttgatctgacacacttactttaaatttgactctctgtg
gaccacacatagttctcagtcctcactgagttgacagcctagtgagtgaa
gctatggatggagtgtcatcagaggagagtgcgtgtgctcagctctagag
tgagcgcagtggacagtgtgtgtgtgtgtcggtgctgtcagggagcctag
gaagctggggtgaggtctttcttcatgagtagaaggttgagctaatggtt
ttgctcatagctaggctgctggactggatcagtctgcaacagatattttc
atacttgctcacatggttcgtgcctgaagccctatcctgataaaaaattc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_4631418_4632526
seq2: B6Ng01-157H15.b_45_1135

seq1  GAATTCACTATGTAGCCCAGGCTGCTTCAGACTCTCCATGCCCCAGCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGCCCAGGCTGCTTCAGACTCTCCATGCCCCAGCCTC  50

seq1  ACCCTCCTGGGTACTGGGGTTACAGCTGTGCACTGCAGGAAGCCCTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCTGGGTACTGGGGTTACAGCTGTGCACTGCAGGAAGCCCTCTTC  100

seq1  CTCACTCTGGCTTACCTGCTTATTCCTTTATTAATATGATCAATGTGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCTGGCTTACCTGCTTATTCCTTTATTAATATGATCAATGTGCTC  150

seq1  TACCTTTTCCTTTCCATGGTTTTTCTTTATTTTTATTTCCTATTAACGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTTCCTTTCCATGGTTTTTCTTTATTTTTATTTCCTATTAACGTC  200

seq1  CACATGGCTCTTTCTTATTTCATTTGCTCTGTTTGTGCAGCTTGCTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGCTCTTTCTTATTTCATTTGCTCTGTTTGTGCAGCTTGCTCTTC  250

seq1  TCGGTCCGTAAGAGCTTTGGCTGGCACGGCCGCCATGCTGAGGTAGGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTCCGTAAGAGCTTTGGCTGGCACGGCCGCCATGCTGAGGTAGGTCA  300

seq1  TCCTCTCCAGGCAGGACAACGTTAGCTACAGTCCACACATTCTGATCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCCAGGCAGGACAACGTTAGCTACAGTCCACACATTCTGATCATC  350

seq1  TGCATTTTCATTTCATTAAATTACTTCTAACTTTTCTTTGTCCTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTCATTTCATTAAATTACTTCTAACTTTTCTTTGTCCTTTTTTT  400

seq1  TTTTTTAAGATTTACTTACATTATGTATGTGAGTACACTGTCTTCTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAGATTTACTTACATTATGTATGTGAGTACACTGTCTTCTCTTC  450

seq1  AGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCCA  500

seq1  CCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTAGAAGTGTAGTCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTAGAAGTGTAGTCAGT  550

seq1  GCTCTTAACCCCTGAGCCATCTCTCCAGCCCCTAACTTTTCTTTAACTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAACCCCTGAGCCATCTCTCCAGCCCCTAACTTTTCTTTAACTTC  600

seq1  ATGTTTTATCTCATTTATCATTTATTTTACAACTACTATAAAATCTTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTATCTCATTTATCATTTATTTTACAACTACTATAAAATCTTTCA  650

seq1  GATATGTTTCTGTTATTAG-TTTTGTTTTAGTAATTCTAGTGTGGTCAAA  699
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GATATGTTTCTGTTATTAGTTTTTGTTTTAGTAATTCTAGTGTGGTCAAA  700

seq1  ATATACTTTGGAAGCTGGTGCTATGGTTCAGTGGGCAAAGGGTTTGTTAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTTGGAAGCTGGTGCTATGGTTCAGTGGGCAAAGGGTTTGTTAC  750

seq1  CAAGCCTTAGTTCCAATCTTGAGCCCACATGGTAGGAGAGGACAGATCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTTAGTTCCAATCTTGAGCCCACATGGTAGGAGAGGACAGATCCC  800

seq1  TGCCAGTCATCACTCGGATTCCTACATACGACTGTAGCAAGTGTCACAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTCATCACTCGGATTCCTACATACGACTGTAGCAAGTGTCACAGA  850

seq1  GTAACATCAAACACCATGTACTTCAGAGCAAGCTGCC-TCGCTGAATGAA  898
      ||||||||||||||||||||||||||||||||||||| |||||| |||||
seq2  GTAACATCAAACACCATGTACTTCAGAGCAAGCTGCCTTCGCTG-ATGAA  899

seq1  GGCATTTGCCGATTGCCAATCCTCAGTACCCAAGTTCAAGCCCTGGAACA  948
      |||||||| |||||||||||||||||||||| |||   ||||||||||||
seq2  GGCATTTGTCGATTGCCAATCCTCAGTACCC-AGT--CAGCCCTGGAACA  946

seq1  CACACGGAACGAGGAGCAGCTTCTGCGAGTTGTCCCCTGGCCTCCGCACA  998
      ||||||||||||||||| |||||||||||| || ||||| ||| ||||||
seq2  CACACGGAACGAGGAGC-GCTTCTGCGAGTGGT-CCCTGACCT-CGCACA  993

seq1  AGTAGCTGTTAGAAATATTTTACACATAAATTTGTATAATTTTAAATACG  1048
      ||||||| ||||||||||||   |||  |||| |  |||||   ||||||
seq2  AGTAGCT-TTAGAAATATTT---ACAATAATTGG--TAATT---AATACG  1034

seq1  TTTACATTGGGAGATATCTAATGTCTGGGAACGTAGTCTATTCTGATACA  1098
       |||||||||||||  |||| |||||||||||||| |||||   |||  |
seq2  -TTACATTGGGAGAATTCTATTGTCTGGGAACGTA-TCTATCTGGAT--A  1080

seq1  AAGATCTCTAA  1109
       ||||||||||
seq2  TAGATCTCTAA  1091