BAC Information

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BAC

Clone NameB6Ng01-157I17
Chromosome19 (Build37)
Map Location 15,109,855 - 15,110,975
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667433, Tle4, EG433225
Downstream geneEG635497, Pomc-ps1, LOC667482, Psat1, LOC100041424, Cep78, LOC100042048
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157I17.bB6Ng01-157I17.g
ACCDH951748DH951749
length1,2061,095
definitionDH951748|Mus musculus domesticus DNA, BAC clone: B6Ng01-157I17, 5' end.DH951749|Mus musculus domesticus DNA, BAC clone: B6Ng01-157I17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctatcaggtataaatctagcaaagaattttttcaggctataag
atgactcctcagttaactgtgtcctatgccatggggaagtttgttaattt
catgaaatcccattgtcaatgttagtcctatttagaaagtcctggcccac
caatatattgaaatatttttcccaatttctcctttgccagttttagaact
tcatattttatgttaaggtctctgaccaatttgaaattgagttttgaaga
gggagagaaatagggatctaaattcattatttcatggatagatatccaat
gtacccagcaccattggttaaagagattttatccaagttatattcttgac
aaccttgtctaaaaccaggtggctttagctgtgtgggtttatatctgtgc
cctctcttctggctcattgttctacctgtttgcttttgtgtcactccatg
cagtttttattaccatggttctctggtacaactttgaaggcacatatggt
tatacctccagcatcattctctttactaaggattgccctcagtgtttagg
atcttttgtgactccatgtgaactttcagagttttttctcttgatgtgag
gaatgaatgaccattggaatgttgatggggatgctgtgaagcgtgccgat
tgcttttggtactctatccattttcttgttgaaccctccatcgtgttgta
tgctcctcagtttctttctccattgttttaatgtttccacttgaagtatt
ttagttccttggctaagtttatttctaggcattttattttattgaggtag
ttaatgagactgttcccacgatctctttctcagcatgtttgctgctgata
tggaagaaggctgttgcagtcctcaaagtgcttgtaagttccaacatttt
ttagtggactctagagggttccttatgagtagaaagatacacctgcaagt
atggaagcattgacgtgtttcctatttgcatcttctttcttcacccaatt
ctctaactagaacttcaaggatgacaattgataggggtgggcgtctttgc
ttctctttgactttatggaatgtgtgaattttctgcccatttaaaaaggt
atccgctgtgagctgctggtaagcttaattatcgggaagtttcttagtcg
ggactatttagaagtcgtatccttaaatgactcgcgagagatagataatt
cgtgac
gaattcttctgactcccaatgcagacagctatttgcctcaatatgatgac
agcatatttcccttttggaatgttgaatgaagggttgagataatggtcag
tcctcccccttctgatgaaaagagaaggctgggagaacacagcagctttg
acgtttgtcagcttgttagccggagtcttcaggacatgtctttatttctg
tagtcagccctagttggcgctaacaaagagtgactgcagtctgggtatag
aggaaatttcattactgtgttaaaaataattgagtaaagagaccaagaaa
taaggccaagttggatgcaaaatgtaagatgtaaggccaaacataagatg
aaaccatgcttattcgggttacttaaggggtaacaaactgctgttttgaa
aactagttgtttggggacatctcatgtatagaaatattggacatcatctg
taattgtgctgagtaatgagaaagacacacctgcttcaaggctaatatga
taatgactgtatgagagaccagaggaaagatatctagggttatactttct
gacttttggggcttgttctgctaaaaacaaaagcctcattaggggagttt
gaaatgaattatatttctccatttctctcacaattaattttcagacagcc
cagttacaattttcaagttagatgcttttgccctgagcagggtggcatga
gacagctgaggaccagcagagggcagtgctgagctgacgctggctctggc
acttacttggggctataaaattgtgcttgttattaaatgaaatcttacgg
ctaactcagccacagaggaaattaaactgctaattatgtgtgtttaaacc
actaaaaagggcccggttgttgctctggatttcaagaaacacctacctca
tctctggatttaaaatatgcattatgcctagaatagtacttttacaatat
atgcatatatattttttatttgtagactatctgtttgcatagctatctct
taaagcaatagcaatatatgttgcttagcattgtcatttcttatagaact
gcagtgactactggagcaatcatgcctcattcatcagtcagagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_15109855_15110975
seq2: B6Ng01-157I17.g_70_1164 (reverse)

seq1  AACTCTGACCTGTATGTAAATTGAGCATGGATTGCT-CAGTTAAAGTCAC  49
      |||||||| ||| |||  |||   |||| ||||||| ||||   ||||||
seq2  AACTCTGA-CTG-ATG--AATGAGGCAT-GATTGCTCCAGT---AGTCAC  42

seq1  TGGCATGTTCTATAAGGAAATGACAATGCTAAAGCCACCAATATATTGCT  99
      | ||| ||||||||| |||||||||||||| |||| ||  ||||||||||
seq2  T-GCA-GTTCTATAA-GAAATGACAATGCT-AAGCAAC--ATATATTGCT  86

seq1  TATTTGCTTTAAAAGAGATAGGCTATGCAAACAGATAAGTCTACAAATTA  149
         |||||||  |||||||| ||||||||||||||| |||||||||| ||
seq2  --ATTGCTTT--AAGAGATA-GCTATGCAAACAGAT-AGTCTACAAA-TA  129

seq1  AAAAATATATATTGCATATAATTGTTAAAAGGTACTATTTCTAGGCATAA  199
      ||||||||||| ||||||| |||||  ||| |||||| ||||||||||||
seq2  AAAAATATATA-TGCATAT-ATTGT--AAAAGTACTA-TTCTAGGCATAA  174

seq1  TTGCATATTTTAAATCCAGAGATGAGGTAGGTGTTTCTTGAAATCCAGAG  249
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TGCATATTTTAAATCCAGAGATGAGGTAGGTGTTTCTTGAAATCCAGAG  223

seq1  CAACAACCGGGCCCTTTTTAGTGGTTTAAACACACATAATTAGCAGTTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACCGGGCCCTTTTTAGTGGTTTAAACACACATAATTAGCAGTTTA  273

seq1  ATTTCCTCTGTGGCTGAGTTAGCCGTAAGATTTCATTTAATAACAAGCAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTCTGTGGCTGAGTTAGCCGTAAGATTTCATTTAATAACAAGCAC  323

seq1  AATTTTATAGCCCCAAGTAAGTGCCAGAGCCAGCGTCAGCTCAGCACTGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATAGCCCCAAGTAAGTGCCAGAGCCAGCGTCAGCTCAGCACTGC  373

seq1  CCTCTGCTGGTCCTCAGCTGTCTCATGCCACCCTGCTCAGGGCAAAAGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCTGGTCCTCAGCTGTCTCATGCCACCCTGCTCAGGGCAAAAGCA  423

seq1  TCTAACTTGAAAATTGTAACTGGGCTGTCTGAAAATTAATTGTGAGAGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTTGAAAATTGTAACTGGGCTGTCTGAAAATTAATTGTGAGAGAA  473

seq1  ATGGAGAAATATAATTCATTTCAAACTCCCCTAATGAGGCTTTTGTTTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAAATATAATTCATTTCAAACTCCCCTAATGAGGCTTTTGTTTTT  523

seq1  AGCAGAACAAGCCCCAAAAGTCAGAAAGTATAACCCTAGATATCTTTCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAACAAGCCCCAAAAGTCAGAAAGTATAACCCTAGATATCTTTCCT  573

seq1  CTGGTCTCTCATACAGTCATTATCATATTAGCCTTGAAGCAGGTGTGTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTCTCATACAGTCATTATCATATTAGCCTTGAAGCAGGTGTGTCT  623

seq1  TTCTCATTACTCAGCACAATTACAGATGATGTCCAATATTTCTATACATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATTACTCAGCACAATTACAGATGATGTCCAATATTTCTATACATG  673

seq1  AGATGTCCCCAAACAACTAGTTTTCAAAACAGCAGTTTGTTACCCCTTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCCCCAAACAACTAGTTTTCAAAACAGCAGTTTGTTACCCCTTAA  723

seq1  GTAACCCGAATAAGCATGGTTTCATCTTATGTTTGGCCTTACATCTTACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCCGAATAAGCATGGTTTCATCTTATGTTTGGCCTTACATCTTACA  773

seq1  TTTTGCATCCAACTTGGCCTTATTTCTTGGTCTCTTTACTCAATTATTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCATCCAACTTGGCCTTATTTCTTGGTCTCTTTACTCAATTATTTT  823

seq1  TAACACAGTAATGAAATTTCCTCTATACCCAGACTGCAGTCACTCTTTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAGTAATGAAATTTCCTCTATACCCAGACTGCAGTCACTCTTTGT  873

seq1  TAGCGCCAACTAGGGCTGACTACAGAAATAAAGACATGTCCTGAAGACTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGCCAACTAGGGCTGACTACAGAAATAAAGACATGTCCTGAAGACTC  923

seq1  CGGCTAACAAGCTGACAAACGTCAAAGCTGCTGTGTTCTCCCAGCCTTCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTAACAAGCTGACAAACGTCAAAGCTGCTGTGTTCTCCCAGCCTTCT  973

seq1  CTTTTCATCAGAAGGGGGAGGACTGACCATTATCTCAACCCTTCATTCAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATCAGAAGGGGGAGGACTGACCATTATCTCAACCCTTCATTCAA  1023

seq1  CATTCCAAAAGGGAAATATGCTGTCATCATATTGAGGCAAATAGCTGTCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAAAAGGGAAATATGCTGTCATCATATTGAGGCAAATAGCTGTCT  1073

seq1  GCATTGGGAGTCAGAAGAATTC  1121
      ||||||||||||||||||||||
seq2  GCATTGGGAGTCAGAAGAATTC  1095