BAC Information

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BAC

Clone NameB6Ng01-164I21
Chromosome19 (Build37)
Map Location 15,802,522 - 15,913,176
singlet/doubletdoublet
Overlap genenone
Upstream geneEG433225, EG635497, Pomc-ps1, LOC667482
Downstream genePsat1, LOC100041424, Cep78, LOC100042048, Gnaq, E030024N20Rik, LOC624438, Gna14, LOC666665, Vps13a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164I21.bB6Ng01-164I21.g
ACCDH956847DH956848
length1,1581,074
definitionDH956847|Mus musculus domesticus DNA, BAC clone: B6Ng01-164I21, 5' end.DH956848|Mus musculus domesticus DNA, BAC clone: B6Ng01-164I21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,911,996 - 15,913,176)(15,802,522 - 15,803,595)
sequence
gaattcttctttgcataagccaggtattttcaaggtcaggggtgaggcct
gtgctggaggggtactggccctgcttagaggtaattggtctgaaagagtg
gctattgtgagctctaggggaagcaggaccggctggcttctgctgctggc
tactgtcacagtccccttggcagcccccggttcttgctcataaatatatg
cagactttctgaaagcactggagccttttcaagggaaggggaaaacacgg
ttcggttcattgttagctctacagttgctcccgattttaagaagggcaga
tgtttgatggaacagatgttgccagggacccagtgggaatagtcctgaga
cttcatttgagaacaatggtttccaaaaacaaaaacaaaaacaaaacaaa
acaaaacaaacaaataaacaaacaaaaaatggtttcaaagaacataactt
ttcataacaaaaaatgtcaggacatgaaattgttgcactgctgtttgagg
tgtggagagggtaatagtcttgcatggcctccaacttcagcctccagtgt
aaataccgtgcagaaagagtccttttgccaggaagccattaggaaagtga
tgttgggccaactgaagtcctgtgtgcatgacaactgtcagctgatcagg
aactctcaaactcctgttcttataatagagtaatatgcaaaagagaagac
aaaacagttggccttctcagccatgcttaacaacttggacttaacacccc
caccagctgtaaattgagtgtgttaagtcataaatctcaaaggaggtgaa
agttccttggcagataatgagctgtctccattatcttctcattcatgact
tcctgtgggggagcttgggagagcagttgggctttctttgacaagcatct
gcagataagcagggagtgtttctggcagtttttcaggtagtctgtcccct
ctttgatgggggcacttggaggctcctcagggacagtggttacttcccac
tctgcagtgccccatctttacatcttccaagaagaacttagttttaaaaa
aaaaccaaccaaaccaaaaacaaaaaccaatgagaattcccaaagaacct
tccaggacaacaaaacatccgctgtaaacgcaggtttcatcttctgaaag
ttgtttgc
gaattcacctgaacctaaagaggggccgttcattgggcttgttaagttgt
taaattagagactctatatacaactatggagtaggaaaactactgtgaca
atcctgtgttgagtaggatgctatgaaagagttaggtagccacaaaattc
ttctttttgacaccatgcagtggtaactaaaggagttgttaaagaggtgt
ctaaaagatacccccaataatcttgtgttttgaatgctcagcccccttct
tacagcaccattttgaaagctctggagactttaggaggtagggcctggcc
tcactggcccaaggatgggagactgaaattcacatccctctcctgcttcc
tgcctgccaccatgtgaacagccatcatgggttcatctcccactggcacg
ctttcccaactgtggtggactggaaccctctaaactctaatggaaacaga
aacaagcaaacaaacgacttttatgttgcttctccccactacttcatcac
ggtaacaagaagtaactaagacaacggttctgactgtttcccccaggctc
tcaacgccgagaacaaatttcacacttctacttctgaatcttgtttccaa
cccatgccatatcgaagagaatgaatattatggcctgtcttgttccacgg
agcttcccctaggcttttgttcataactacttccttcatgtcctccttgt
taggaagagattggtgagtatgaactctgtggccaggtggtggtgatcct
acgtcatgatcacggagactgaaatttgttctgccttggtatttcccttt
tactctttttctcccctccccagccaaaggtcaaacgtttactaattgct
aatgattaaaagtattgtgctaactgatgctaactacagtgacatttctg
taattagtttaagagtctaaagtgatgtgcaggatagccagagaggctac
agaagaagagcagactaatatctgaaagttgaaatggattcagttttcta
aaattagctgaagcagcaaccaagaagacccatgaaattaagggcctcgt
gtgtatacttccgttgactttgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_15911996_15913176
seq2: B6Ng01-164I21.b_45_1202 (reverse)

seq1  GCAAACAAAACCTGTCAGAAGATG-AACCTGCTGTTTACAGCGGATGTTT  49
      ||||||||   || |||||||||| ||||||| |||||||||||||| ||
seq2  GCAAACAA---CTTTCAGAAGATGAAACCTGC-GTTTACAGCGGATG-TT  45

seq1  TTGTTGCTCCCTGGGAAGGTTCTTTGGGGAATTTCCTTCATTTGTTTTTT  99
      |||||| |||   |||||||||||| |||||||    ||||| |||||| 
seq2  TTGTTG-TCC--TGGAAGGTTCTTT-GGGAATT---CTCATTGGTTTTT-  87

seq1  TGTTTTTTGGTTTTGGGTTTGTTTTTTTTTTTAAAAACTAAGTCTGTCTT  149
         ||||||||||  |||| ||||||||||   ||||||||||   ||||
seq2  --GTTTTTGGTTT--GGTTGGTTTTTTTTT---AAAACTAAGTTCTTCTT  130

seq1  TGAAGATGTAAAGATGTGGGCACTGCAGAGTGGGAAGTAACCACTGTCCC  199
       ||||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  GGAAGATGTAAAGATG-GGGCACTGCAGAGTGGGAAGTAACCACTGT-CC  178

seq1  CTGA-GAGCCTCCAAAGTGCCCCCATCAAAGAGGGGACAGACTACCCTGA  248
      |||| |||||||| |||||||||||||||||||||||||||||| |||||
seq2  CTGAGGAGCCTCC-AAGTGCCCCCATCAAAGAGGGGACAGACTA-CCTGA  226

seq1  AAAACTGCCAGAAACACTCCCCTGCTTATCTGCAGATGCTTGTCAAAGAA  298
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAAACTGCCAGAAACACT-CCCTGCTTATCTGCAGATGCTTGTCAAAGAA  275

seq1  AGCCCAACTGCTCTCCCAAGCTCCCCCACAGGAAGTCATGAATGAGAAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAACTGCTCTCCCAAGCTCCCCCACAGGAAGTCATGAATGAGAAGA  325

seq1  TAATGGAGACAGCTCATTATCTGCCAAGGAACTTTCACCTCCTTTGAGAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGAGACAGCTCATTATCTGCCAAGGAACTTTCACCTCCTTTGAGAT  375

seq1  TTATGACTTAACACACTCAATTTACAGCTGGTGGGGGTGTTAAGTCCAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACTTAACACACTCAATTTACAGCTGGTGGGGGTGTTAAGTCCAAG  425

seq1  TTGTTAAGCATGGCTGAGAAGGCCAACTGTTTTGTCTTCTCTTTTGCATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAGCATGGCTGAGAAGGCCAACTGTTTTGTCTTCTCTTTTGCATA  475

seq1  TTACTCTATTATAAGAACAGGAGTTTGAGAGTTCCTGATCAGCTGACAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTATTATAAGAACAGGAGTTTGAGAGTTCCTGATCAGCTGACAGT  525

seq1  TGTCATGCACACAGGACTTCAGTTGGCCCAACATCACTTTCCTAATGGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGCACACAGGACTTCAGTTGGCCCAACATCACTTTCCTAATGGCT  575

seq1  TCCTGGCAAAAGGACTCTTTCTGCACGGTATTTACACTGGAGGCTGAAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCAAAAGGACTCTTTCTGCACGGTATTTACACTGGAGGCTGAAGT  625

seq1  TGGAGGCCATGCAAGACTATTACCCTCTCCACACCTCAAACAGCAGTGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCCATGCAAGACTATTACCCTCTCCACACCTCAAACAGCAGTGCA  675

seq1  ACAATTTCATGTCCTGACATTTTTTGTTATGAAAAGTTATGTTCTTTGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTCATGTCCTGACATTTTTTGTTATGAAAAGTTATGTTCTTTGAA  725

seq1  ACCATTTTTTGTTTGTTTATTTGTTTGTTTTGTTTTGTTTTGTTTTTGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTTTTGTTTGTTTATTTGTTTGTTTTGTTTTGTTTTGTTTTTGTT  775

seq1  TTTGTTTTTGGAAACCATTGTTCTCAAATGAAGTCTCAGGACTATTCCCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTGGAAACCATTGTTCTCAAATGAAGTCTCAGGACTATTCCCA  825

seq1  CTGGGTCCCTGGCAACATCTGTTCCATCAAACATCTGCCCTTCTTAAAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCCCTGGCAACATCTGTTCCATCAAACATCTGCCCTTCTTAAAAT  875

seq1  CGGGAGCAACTGTAGAGCTAACAATGAACCGAACCGTGTTTTCCCCTTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGCAACTGTAGAGCTAACAATGAACCGAACCGTGTTTTCCCCTTCC  925

seq1  CTTGAAAAGGCTCCAGTGCTTTCAGAAAGTCTGCATATATTTATGAGCAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAAGGCTCCAGTGCTTTCAGAAAGTCTGCATATATTTATGAGCAA  975

seq1  GAACCGGGGGCTGCCAAGGGGACTGTGACAGTAGCCAGCAGCAGAAGCCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCGGGGGCTGCCAAGGGGACTGTGACAGTAGCCAGCAGCAGAAGCCA  1025

seq1  GCCGGTCCTGCTTCCCCTAGAGCTCACAATAGCCACTCTTTCAGACCAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGTCCTGCTTCCCCTAGAGCTCACAATAGCCACTCTTTCAGACCAAT  1075

seq1  TACCTCTAAGCAGGGCCAGTACCCCTCCAGCACAGGCCTCACCCCTGACC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTAAGCAGGGCCAGTACCCCTCCAGCACAGGCCTCACCCCTGACC  1125

seq1  TTGAAAATACCTGGCTTATGCAAAGAAGAATTC  1181
      |||||||||||||||||||||||||||||||||
seq2  TTGAAAATACCTGGCTTATGCAAAGAAGAATTC  1158

seq1: chr19_15802522_15803595
seq2: B6Ng01-164I21.g_67_1140

seq1  GAATTCACCTGAACCTAAAGAGGGGCCGTTCATTGGGCTTGTTAAGTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTGAACCTAAAGAGGGGCCGTTCATTGGGCTTGTTAAGTTGT  50

seq1  TAAATTAGAGACTCTATATACAACTATGGAGTAGGAAAACTACTGTGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAGAGACTCTATATACAACTATGGAGTAGGAAAACTACTGTGACA  100

seq1  ATCCTGTGTTGAGTAGGATGCTATGAAAGAGTTAGGTAGCCACAAAATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTGTTGAGTAGGATGCTATGAAAGAGTTAGGTAGCCACAAAATTC  150

seq1  TTCTTTTTGACACCATGCAGTGGTAACTAAAGGAGTTGTTAAAGAGGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTGACACCATGCAGTGGTAACTAAAGGAGTTGTTAAAGAGGTGT  200

seq1  CTAAAAGATACCCCCAATAATCTTGTGTTTTGAATGCTCAGCCCCCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGATACCCCCAATAATCTTGTGTTTTGAATGCTCAGCCCCCTTCT  250

seq1  TACAGCACCATTTTGAAAGCTCTGGAGACTTTAGGAGGTAGGGCCTGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCACCATTTTGAAAGCTCTGGAGACTTTAGGAGGTAGGGCCTGGCC  300

seq1  TCACTGGCCCAAGGATGGGAGACTGAAATTCACATCCCTCTCCTGCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGCCCAAGGATGGGAGACTGAAATTCACATCCCTCTCCTGCTTCC  350

seq1  TGCCTGCCACCATGTGAACAGCCATCATGGGTTCATCTCCCACTGGCACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCACCATGTGAACAGCCATCATGGGTTCATCTCCCACTGGCACG  400

seq1  CTTTCCCAACTGTGGTGGACTGGAACCCTCTAAACTCTAATGGAAACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCAACTGTGGTGGACTGGAACCCTCTAAACTCTAATGGAAACAGA  450

seq1  AACAAGCAAACAAACGACTTTTATGTTGCTTCTCCCCACTACTTCATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCAAACAAACGACTTTTATGTTGCTTCTCCCCACTACTTCATCAC  500

seq1  GGTAACAAGAAGTAACTAAGACAACGGTTCTGACTGTTTCCCCCAGGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACAAGAAGTAACTAAGACAACGGTTCTGACTGTTTCCCCCAGGCTC  550

seq1  TCAACGCCGAGAACAAATTTCACACTTCTACTTCTGAATCTTGTTTCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGCCGAGAACAAATTTCACACTTCTACTTCTGAATCTTGTTTCCAA  600

seq1  CCCATGCCATATCGAAGAGAATGAATATTATGGCCTGTCTTGTTCCACGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGCCATATCGAAGAGAATGAATATTATGGCCTGTCTTGTTCCACGG  650

seq1  AGCTTCCCCTAGGCTTTTGTTCATAACTACTTCCTTCATGTCCTCCTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCCCTAGGCTTTTGTTCATAACTACTTCCTTCATGTCCTCCTTGT  700

seq1  TAGGAAGAGATTGGTGAGTATGAACTCTGTGGCCAGGTGGTGGTGATCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGAGATTGGTGAGTATGAACTCTGTGGCCAGGTGGTGGTGATCCT  750

seq1  ACGTCATGATCACGGAGACTGAAATTTGTTCTGCCTTGGTATTTCCCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCATGATCACGGAGACTGAAATTTGTTCTGCCTTGGTATTTCCCTTT  800

seq1  TACTCTTTTTCTCCCCTCCCCAGCCAAAGGTCAAACGTTTACTAATTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTTTTCTCCCCTCCCCAGCCAAAGGTCAAACGTTTACTAATTGCT  850

seq1  AATGATTAAAAGTATTGTGCTAACTGATGCTAACTACAGTGACATTTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTAAAAGTATTGTGCTAACTGATGCTAACTACAGTGACATTTCTG  900

seq1  TAATTAGTTTAAGAGTCTAAAGTGATGTGCAGGATAGCCAGAGAGGCTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGTTTAAGAGTCTAAAGTGATGTGCAGGATAGCCAGAGAGGCTAC  950

seq1  AG-AGAAGAGCAGGACT-ATATCTGAAAGTTGAAATGGATCCAGTTTTCT  998
      || ||||||||| |||| |||||||||||||||||||||| |||||||||
seq2  AGAAGAAGAGCA-GACTAATATCTGAAAGTTGAAATGGATTCAGTTTTCT  999

seq1  AAAATTAGCTGAAGCAGCAACCAAGAAAGACCCATGAAAATAAGGGCCTC  1048
      ||||||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  AAAATTAGCTGAAGCAGCAACCAAG-AAGACCCATGAAATTAAGGGCCTC  1048

seq1  GTGTGTATACTTCTGTTGACTTTGGA  1074
      ||||||||||||| ||||||||||||
seq2  GTGTGTATACTTCCGTTGACTTTGGA  1074