BAC Information

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BAC

Clone NameB6Ng01-164N05
Chromosome19 (Build37)
Map Location 33,339,396 - 33,488,585
singlet/doubletdoublet
Overlap gene6530404N21Rik, LOC638381
Upstream gene2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik
Downstream geneEG668095, LOC628236, AI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164N05.bB6Ng01-164N05.g
ACCDH957049DH957050
length1,130224
definitionDH957049|Mus musculus domesticus DNA, BAC clone: B6Ng01-164N05, 5' end.DH957050|Mus musculus domesticus DNA, BAC clone: B6Ng01-164N05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,339,396 - 33,340,539)(33,488,362 - 33,488,585)
sequence
gaattcctcctatagttttgattgagctcatttctggatatttggactgc
ctttgggggcttgggagattcacgattcctttggatctgacagttaagac
tgtatgttttgtagctcagaagtagaaatggacagatcccatctttgtct
cctccctagaacactgtggggttggcaggtaatcataggtccctcagttt
ctacccattctgaaatccatccttgagtctccttttgtgcactcctggga
gcagtgatacacatagtcatattctcataataaattctttctttttttgt
aagttataacaattttttgtccgatcactgggagactctattctcattag
tgagctaatattgataaagatagatcaatccaacatatactctgtcaaca
cggtagtttttctccttgctgtggtttattttattttcactttcttgcat
atcaaagccattttaacatgaaagaaacaacgcccaacttcaaagtcttt
caaacataaaacaaataggtagttactgttgccatggttcctgtcaatga
atctcacagcctgattgcctgtagagccaggagcaaagtggagctaaagg
ctctctgggtgtcactgctgccacttaacttaagctcctagttactgctg
taattataggctccacagttgcaggtgattaccaagcagtacaaagccta
tttatgtatttaggtttttctcagagcagtttttgattctgaaactaata
aaaaagattatctgtcctcatgatttatagatggcaaaaatatttttgtg
agttcagatggtttctagacccatttaaacaacaaagactttaagaaagg
tgtgtgcacagttagggtcaacttctggctgaacaaaggttgatggcaca
tgcctttagtccagccctcagtggatctctgtgagttccatgtcagcctg
gcctatctggtgagctccatgctagccaggctacacagtgagaccttgtc
tcaaataaacactacagcaatacaaataaaattaaaatgcaggagattta
ttaacatagtactgatatttcttgaagcatgtatgaatcagaaatgtcag
agttgaaatctcttacagtggactcattca
tacttccttctccttggatgggaactttagctgccttggacttttccaaa
tctcctttgtttaaaaattaaaaagctgggaattgtctttgggtaacaga
tgtgcaatgtaacattcagctagttagagttatatttttcatgttatact
ctctaacagcctacattgcacttttgagaactcttttatatatatatata
gtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33339396_33340539
seq2: B6Ng01-164N05.b_47_1176

seq1  GAATTCCTCCTATAGTTTTGATTGAGCTCATTTCTGGATATTTGGACTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTATAGTTTTGATTGAGCTCATTTCTGGATATTTGGACTGC  50

seq1  CTTTGGGGGCTTGGGAGATTCACGATTCCTTTGGATCTGACAGTTAAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGGGCTTGGGAGATTCACGATTCCTTTGGATCTGACAGTTAAGAC  100

seq1  TGTATGTTTTGTAGCTCAGAAGTAGAAATGGACAGATCCCATCTTTGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTTTTGTAGCTCAGAAGTAGAAATGGACAGATCCCATCTTTGTCT  150

seq1  CCTCCCTAGAACACTGTGGGGTTGGCAGGTAATCATAGGTCCCTCAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTAGAACACTGTGGGGTTGGCAGGTAATCATAGGTCCCTCAGTTT  200

seq1  CTACCCATTCTGAAATCCATCCTTGAGTCTCCTTTTGTGCACTCCTGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCATTCTGAAATCCATCCTTGAGTCTCCTTTTGTGCACTCCTGGGA  250

seq1  GCAGTGATACACATAGTCATATTCTCATAATAAATTCTTTCTTTTTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGATACACATAGTCATATTCTCATAATAAATTCTTTCTTTTTTTGT  300

seq1  AAGTTATAACAATTTTTTGTCCGATCACTGGGAGACTCTATTCTCATTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATAACAATTTTTTGTCCGATCACTGGGAGACTCTATTCTCATTAG  350

seq1  TGAGCTAATATTGATAAAGATAGATCAATCCAACATATACTCTGTCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTAATATTGATAAAGATAGATCAATCCAACATATACTCTGTCAACA  400

seq1  CGGTAGTTTTTCTCCTTGCTGTGGTTTATTTTATTTTCACTTTCTTGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAGTTTTTCTCCTTGCTGTGGTTTATTTTATTTTCACTTTCTTGCAT  450

seq1  ATCAAAGCCATTTTAACATGAAAGAAACAACGCCCAACTTCAAAGTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGCCATTTTAACATGAAAGAAACAACGCCCAACTTCAAAGTCTTT  500

seq1  CAAACATAAAACAAATAGGTAGTTACTGTTGCCATGGTTCCTGTCAATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATAAAACAAATAGGTAGTTACTGTTGCCATGGTTCCTGTCAATGA  550

seq1  ATCTCACAGCCTGATTGCCTGTAGAGCCAGGAGCAAAGTGGAGCTAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACAGCCTGATTGCCTGTAGAGCCAGGAGCAAAGTGGAGCTAAAGG  600

seq1  CTCTCTGGGTGTCACTGCTGCCACTTAACTTAAGCTCCTAGTTACTGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGGGTGTCACTGCTGCCACTTAACTTAAGCTCCTAGTTACTGCTG  650

seq1  TAATTATAGGCTCCACAGTTGCAGGTGATTACCAAGCAGTACAAAGCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATAGGCTCCACAGTTGCAGGTGATTACCAAGCAGTACAAAGCCTA  700

seq1  TTTATGTATTTAGGTTTTTCTCAGAGCAGTTTTTGATTCTGAAACTAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTATTTAGGTTTTTCTCAGAGCAGTTTTTGATTCTGAAACTAATA  750

seq1  AAAAAGATTATCTGTCCTCATGATTTATAGATGGCAAAAATATTTTTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATTATCTGTCCTCATGATTTATAGATGGCAAAAATATTTTTGTG  800

seq1  AGTTCAGATGGTTTCTAGACCCATTTAAACAACAAAGACTTTAAGAAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGATGGTTTCTAGACCCATTTAAACAACAAAGACTTTAAGAAAGG  850

seq1  TGTGTGCACAGTTAGGGTCAACTTCTGGCTGAACAAAGGTTGATGGCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCACAGTTAGGGTCAACTTCTGGCTGAACAAAGGTTGATGGCACA  900

seq1  TGCCTTTAGTCCAGCCCTCAGTGGATCTCTGTGAGTTCCATGTCAGCCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTAGTCCAGCCCTCAGTGGATCTCTGTGAGTTCCATGTCAGCCTG  950

seq1  GCCTATCTGGTGAGCTCCATGCTAGCCAGGGCTACACAGTGAGACCTTGT  1000
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCCTATCTGGTGAGCTCCATGCTAGCCA-GGCTACACAGTGAGACCTTGT  999

seq1  CTCAAAATAAAACACTAACCAAGCAAATACAAAATAAAAATAAAAATGCA  1050
      ||||||   ||||||||    ||| ||||||||   ||||| ||||||| 
seq2  CTCAAA--TAAACACTA---CAGC-AATACAAA--TAAAATTAAAATGC-  1040

seq1  AGGAGATTTATATACATAGTACTGATATTTCTTGAAGCATGTATGAAATC  1100
      |||||||||||  |||||||||||||||||||||||||||||||| ||||
seq2  AGGAGATTTATTAACATAGTACTGATATTTCTTGAAGCATGTATG-AATC  1089

seq1  AGGACATGTCAGAGTTGGAAATTCTCTTACAGTGGACTCATTCA  1144
      | || ||||||||||||  || ||||||||||||||||||||||
seq2  A-GAAATGTCAGAGTTG--AAATCTCTTACAGTGGACTCATTCA  1130

seq1: chr19_33488362_33488585
seq2: B6Ng01-164N05.g_74_297 (reverse)

seq1  ACACACACACACACACACACACACTATATATATATATAAAAGAGTTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACTATATATATATATAAAAGAGTTCTCA  50

seq1  AAAGTGCAATGTAGGCTGTTAGAGAGTATAACATGAAAAATATAACTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCAATGTAGGCTGTTAGAGAGTATAACATGAAAAATATAACTCTA  100

seq1  ACTAGCTGAATGTTACATTGCACATCTGTTACCCAAAGACAATTCCCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCTGAATGTTACATTGCACATCTGTTACCCAAAGACAATTCCCAGC  150

seq1  TTTTTAATTTTTAAACAAAGGAGATTTGGAAAAGTCCAAGGCAGCTAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTTTTAAACAAAGGAGATTTGGAAAAGTCCAAGGCAGCTAAAG  200

seq1  TTCCCATCCAAGGAGAAGGAAGTA  224
      ||||||||||||||||||||||||
seq2  TTCCCATCCAAGGAGAAGGAAGTA  224