BAC Information

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BAC

Clone NameB6Ng01-165A16
Chromosome19 (Build37)
Map Location 13,440,268 - 13,541,988
singlet/doubletdoublet
Overlap geneOlfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1
Upstream geneOlfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467
Downstream geneOlfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165A16.bB6Ng01-165A16.g
ACCDH957206DH957207
length1,1531,096
definitionDH957206|Mus musculus domesticus DNA, BAC clone: B6Ng01-165A16, 5' end.DH957207|Mus musculus domesticus DNA, BAC clone: B6Ng01-165A16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,440,268 - 13,441,418)(13,540,887 - 13,541,988)
sequence
gaattcacttattttttttttctggcactttgcactgagacattaataca
aaattatataagtatacaaagaagcttttagggaaaagatatgcatgtgg
gtattctttagtgaaagacactctggatattagaaaattttcagagttaa
atgaaatacggcttctctggatgttattattatctactaatttgactgaa
atcagattattccatgtaattcatgagacatttgcttatttatgttaaaa
ataggttctcaaaaataccttgtacttgccacagaagatttataacaact
tgccctcagtgtttgtggctagtgtcttgtccattttggatttagtgaat
agaacaaaaatcagtgaaagggctagtttttcctcaaaatgtctctgtgg
ctgaatctctcttttcccctcaagtctcacatgctctctctgctttcttt
ttccttttatctttcaattctttgcactctctgttttcttcccctgaccc
ccttgtactttgactatggcatgtattttctctcactctttggcatggga
acttctatctgaacttcaagattgtcattagccagttcattcccaccttc
ttaggatactaaattcagattgaattaactacttgccttctttattcctt
agacttgggtcaatatattaagggttttatatacacaactaccctaaaat
tataccaataatatatttatgcttcataaatatatctgtttcactggaga
gcacagaaaatatccagtagtgtttattgctaataatttaacttctaatt
tggatataatgatgtaactgatacatattatttatttacttcactgtcat
tccaggaattgagtttcaaaatatcaattattaaatgacagtgacttctt
tgcacattttactgaaatatgtactatactgacacctctttttgattagt
atttctctttgaccatgtctttttattttattttcagaaggataattttg
tcagagtagccaggaaatgtataattttaaaagttattgtttttcatctg
ttacctaagttctctagactatttatatcaaatagatgggtatgtacttc
catttctggaaagagccatttctttctgcatagataaatttgcatttctc
ttt
gaattcaggattatattacctatgtcatgaccagaaattattatttagca
gatttccttctcttccactggcttttatatattttcatttccacttcctg
tgtattcccagagcctagatagtggtgatagggttaatatgcatgttcta
ttttcatgtgaacactcaatctcttattctcagcaatttgaccaggcatg
catatctgtgttgaatgttcctgcccattaaaagaagtttttgctgacag
aagtttatctctatataccatctttcatttcttttttgtatttctacttt
tgaattccaataaagatttatgtaccaaacatttttggtaatgaatacgt
actatttatttgatctttttcaaatacaatgcaagaagaagagcaatgag
aacaaacatcacattagctttgagactgataataagactaaaccctaagt
gttcccataaacagctcacttctcagtgatagtctgaatttctattcttc
tcttttcttaattcctttctcactcctttatccgttctgttacccacttc
caaataaataaatgaactcaaatcacaggcttgaggttagtatctaggga
ccttacataattctttagacaaaatctaatgctctttaatagttaggcga
cttttacatctgatcaaatttaccgtggaaagaattattccaggtcaata
agagccatttttttttaaaggaagtgaatggagttttgaggttgatagaa
aaaaattgtctttagacttccaaacacaatcacatgtgaaacaacactcc
ccttcacgcagaacatgtacctgcacaaatagtactggtctgattgatga
gtaacactgggtacattgcacatgctctggttcatgactccacacccata
tacatatgataggaactcaataaacttattataagtaatggaagatgtca
taaagttggtcatctggcagagatctggtgagacatagaggatggaagaa
tgggatagaaataataattttattgggattgtttggaaatttctcaccct
atccccatttatcctcctacatattctccttgccaggtttattctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13440268_13441418
seq2: B6Ng01-165A16.b_45_1197

seq1  GAATTCACTTATTTTTTTTTTCTGGCACTTTGCACTGAGACATTAATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTATTTTTTTTTTCTGGCACTTTGCACTGAGACATTAATACA  50

seq1  AAATTATATAAGTATACAAAGAAGCTTTTAGGGAAAAGATATGCATGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATATAAGTATACAAAGAAGCTTTTAGGGAAAAGATATGCATGTGG  100

seq1  GTATTCTTTAGTGAAAGACACTCTGGATATTAGAAAATTTTCAGAGTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTTTAGTGAAAGACACTCTGGATATTAGAAAATTTTCAGAGTTAA  150

seq1  ATGAAATACGGCTTCTCTGGATGTTATTATTATCTACTAATTTGACTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATACGGCTTCTCTGGATGTTATTATTATCTACTAATTTGACTGAA  200

seq1  ATCAGATTATTCCATGTAATTCATGAGACATTTGCTTATTTATGTTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATTATTCCATGTAATTCATGAGACATTTGCTTATTTATGTTAAAA  250

seq1  ATAGGTTCTCAAAAATACCTTGTACTTGCCACAGAAGATTTATAACAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTTCTCAAAAATACCTTGTACTTGCCACAGAAGATTTATAACAACT  300

seq1  TGCCCTCAGTGTTTGTGGCTAGTGTCTTGTCCATTTTGGATTTAGTGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCAGTGTTTGTGGCTAGTGTCTTGTCCATTTTGGATTTAGTGAAT  350

seq1  AGAACAAAAATCAGTGAAAGGGCTAGTTTTTCCTCAAAATGTCTCTGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAAATCAGTGAAAGGGCTAGTTTTTCCTCAAAATGTCTCTGTGG  400

seq1  CTGAATCTCTCTTTTCCCCTCAAGTCTCACATGCTCTCTCTGCTTTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATCTCTCTTTTCCCCTCAAGTCTCACATGCTCTCTCTGCTTTCTTT  450

seq1  TTCCTTTTATCTTTCAATTCTTTGCACTCTCTGTTTTCTTCCCCTGACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTATCTTTCAATTCTTTGCACTCTCTGTTTTCTTCCCCTGACCC  500

seq1  CCTTGTACTTTGACTATGGCATGTATTTTCTCTCACTCTTTGGCATGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTTTGACTATGGCATGTATTTTCTCTCACTCTTTGGCATGGGA  550

seq1  ACTTCTATCTGAACTTCAAGATTGTCATTAGCCAGTTCATTCCCACCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTATCTGAACTTCAAGATTGTCATTAGCCAGTTCATTCCCACCTTC  600

seq1  TTAGGATACTAAATTCAGATTGAATTAACTACTTGCCTTCTTTATTCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATACTAAATTCAGATTGAATTAACTACTTGCCTTCTTTATTCCTT  650

seq1  AGACTTGGGTCAATATATTAAGGGTTTTATATACACAACTACCCTAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGGGTCAATATATTAAGGGTTTTATATACACAACTACCCTAAAAT  700

seq1  TATACCAATAATATATTTATGCTTCATAAATATATCTGTTTCACTGGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCAATAATATATTTATGCTTCATAAATATATCTGTTTCACTGGAGA  750

seq1  GCACAGAAAATATCCAGTAGTGTTTATTGCTAATAATTTAACTTCTAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGAAAATATCCAGTAGTGTTTATTGCTAATAATTTAACTTCTAATT  800

seq1  TGGATATAATGATGTAACTGATACATATTATTTATTTACTTCACTGTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATAATGATGTAACTGATACATATTATTTATTTACTTCACTGTCAT  850

seq1  TCCAGGAATTGAGTTTCAAAATATCAATTATTAAATGACAGTGACTTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAATTGAGTTTCAAAATATCAATTATTAAATGACAGTGACTTCTT  900

seq1  TGCACATTTTACTGAAATATGTACTATACTGACACCTCTTTTTGATTAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATTTTACTGAAATATGTACTATACTGACACCTCTTTTTGATTAGT  950

seq1  ATTTCTCTTTGACCATGTCTTTTTATTTTATTTTCAGAAGGATAA-TTTG  999
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATTTCTCTTTGACCATGTCTTTTTATTTTATTTTCAGAAGGATAATTTTG  1000

seq1  TCAGAGTAGCCA-GAAATGTAATAATTTTAAAAGTTAATG-TTTTCATCT  1047
      |||||||||||| ||||||| |||||||||||||||| || |||||||||
seq2  TCAGAGTAGCCAGGAAATGT-ATAATTTTAAAAGTTATTGTTTTTCATCT  1049

seq1  GTTA-CTAAATTTTCTAGACTATTTATATCAAATAGAATGGTAATGTACT  1096
      |||| |||| || ||||||||||||||||||||||| ||||  |||||||
seq2  GTTACCTAAGTTCTCTAGACTATTTATATCAAATAG-ATGGGTATGTACT  1098

seq1  TTCATTTCT-GAAAGAGCCATTTCTTTCCTGCATTAGATAAGTTTGCA-T  1144
      | ||||||| ||||||||||||||||| ||||| ||||||| |||||| |
seq2  TCCATTTCTGGAAAGAGCCATTTCTTT-CTGCA-TAGATAAATTTGCATT  1146

seq1  TCTCTTT  1151
      |||||||
seq2  TCTCTTT  1153

seq1: chr19_13540887_13541988
seq2: B6Ng01-165A16.g_68_1163 (reverse)

seq1  AAGAATAAAAACTTGCAAGGAGAATATGTTAGGGAGGATAAATTGGGGAT  50
      |||||| ||| || |||||||||||||||   |||||||||| |||||||
seq2  AAGAAT-AAACCTGGCAAGGAGAATATGT--AGGAGGATAAA-TGGGGAT  46

seq1  AGGGTGAGAAATTTCAAAAACATACACAAT-AAATTATTATATCTATCCC  99
      |||||||||||||||  |||||  | |||| |||||||||| ||||||||
seq2  AGGGTGAGAAATTTC-CAAACAATCCCAATAAAATTATTATTTCTATCCC  95

seq1  ATTCTTCCATTCTCTATGTCTCACCAGATCTCTGCCAGAATGACCAAACT  149
      |||||||||| ||||||||||||||||||||||||||| |||||| ||||
seq2  ATTCTTCCATCCTCTATGTCTCACCAGATCTCTGCCAG-ATGACC-AACT  143

seq1  TTATGACATCTTCCATTACTTATAATAAGTTTATTGAGTTCCTATCATAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACATCTTCCATTACTTATAATAAGTTTATTGAGTTCCTATCATAT  193

seq1  GTATATGGGTGTGGAGTCATGAACCAGAGCATGTGCAATGTACCCAGTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGGGTGTGGAGTCATGAACCAGAGCATGTGCAATGTACCCAGTGT  243

seq1  TACTCATCAATCAGACCAGTACTATTTGTGCAGGTACATGTTCTGCGTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATCAATCAGACCAGTACTATTTGTGCAGGTACATGTTCTGCGTGA  293

seq1  AGGGGAGTGTTGTTTCACATGTGATTGTGTTTGGAAGTCTAAAGACAATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGTGTTGTTTCACATGTGATTGTGTTTGGAAGTCTAAAGACAATT  343

seq1  TTTTTCTATCAACCTCAAAACTCCATTCACTTCCTTTAAAAAAAAATGGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTATCAACCTCAAAACTCCATTCACTTCCTTTAAAAAAAAATGGC  393

seq1  TCTTATTGACCTGGAATAATTCTTTCCACGGTAAATTTGATCAGATGTAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTGACCTGGAATAATTCTTTCCACGGTAAATTTGATCAGATGTAA  443

seq1  AAGTCGCCTAACTATTAAAGAGCATTAGATTTTGTCTAAAGAATTATGTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCGCCTAACTATTAAAGAGCATTAGATTTTGTCTAAAGAATTATGTA  493

seq1  AGGTCCCTAGATACTAACCTCAAGCCTGTGATTTGAGTTCATTTATTTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCTAGATACTAACCTCAAGCCTGTGATTTGAGTTCATTTATTTAT  543

seq1  TTGGAAGTGGGTAACAGAACGGATAAAGGAGTGAGAAAGGAATTAAGAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGTGGGTAACAGAACGGATAAAGGAGTGAGAAAGGAATTAAGAAA  593

seq1  AGAGAAGAATAGAAATTCAGACTATCACTGAGAAGTGAGCTGTTTATGGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGAATAGAAATTCAGACTATCACTGAGAAGTGAGCTGTTTATGGG  643

seq1  AACACTTAGGGTTTAGTCTTATTATCAGTCTCAAAGCTAATGTGATGTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTAGGGTTTAGTCTTATTATCAGTCTCAAAGCTAATGTGATGTTT  693

seq1  GTTCTCATTGCTCTTCTTCTTGCATTGTATTTGAAAAAGATCAAATAAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCATTGCTCTTCTTCTTGCATTGTATTTGAAAAAGATCAAATAAAT  743

seq1  AGTACGTATTCATTACCAAAAATGTTTGGTACATAAATCTTTATTGGAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACGTATTCATTACCAAAAATGTTTGGTACATAAATCTTTATTGGAAT  793

seq1  TCAAAAGTAGAAATACAAAAAAGAAATGAAAGATGGTATATAGAGATAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGTAGAAATACAAAAAAGAAATGAAAGATGGTATATAGAGATAAA  843

seq1  CTTCTGTCAGCAAAAACTTCTTTTAATGGGCAGGAACATTCAACACAGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTCAGCAAAAACTTCTTTTAATGGGCAGGAACATTCAACACAGAT  893

seq1  ATGCATGCCTGGTCAAATTGCTGAGAATAAGAGATTGAGTGTTCACATGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGCCTGGTCAAATTGCTGAGAATAAGAGATTGAGTGTTCACATGA  943

seq1  AAATAGAACATGCATATTAACCCTATCACCACTATCTAGGCTCTGGGAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAACATGCATATTAACCCTATCACCACTATCTAGGCTCTGGGAAT  993

seq1  ACACAGGAAGTGGAAATGAAAATATATAAAAGCCAGTGGAAGAGAAGGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGAAGTGGAAATGAAAATATATAAAAGCCAGTGGAAGAGAAGGAA  1043

seq1  ATCTGCTAAATAATAATTTCTGGTCATGACATAGGTAATATAATCCTGAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTAAATAATAATTTCTGGTCATGACATAGGTAATATAATCCTGAA  1093

seq1  TTC  1102
      |||
seq2  TTC  1096