BAC Information

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BAC

Clone NameB6Ng01-165O05
Chromosome19 (Build37)
Map Location 56,679,605 - 56,813,079
singlet/doubletdoublet
Overlap geneAdrb1
Upstream geneVti1a, Tcf7l2, Ppnr, LOC100043484, Habp2, Nrap, Casp7, 9930023K05Rik, Dclre1a, Nhlrc2
Downstream geneEG629643, A630007B06Rik, 1700010L13Rik, Tdrd1, Vwa2, Afap1l2, Ablim1, EG668259, AI450540, Trub1, LOC100043038, Atrnl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165O05.bB6Ng01-165O05.g
ACCDH957824DH957825
length1,089207
definitionDH957824|Mus musculus domesticus DNA, BAC clone: B6Ng01-165O05, 5' end.DH957825|Mus musculus domesticus DNA, BAC clone: B6Ng01-165O05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,679,605 - 56,680,693)(56,812,873 - 56,813,079)
sequence
gaattctatgatgatgagagaccaaggcacaagaaccacaagattaaggc
caaccttggtttaaacaattattggggttggagttttagctcagtggtag
agtgtttgcctagcaagtgcaaggccctgggttcggtcctcagctctggg
gaaaaacaaacaaacaacaataacaacaaaaaccaaggtaactggttaaa
caattgtcgaagttttgtcttttactgtttattgtaatgttatttggtgg
cctccaagacctggagtctgcacttagcttctgggaaccttccccgagtt
aattctggttggtaaataaagacattagcagtcagtaactgaggagaaga
gacataggcagggtttaggtttcctaggctagaggcctcgaggaagaaga
gagaggcagagcagccgtgggacagaggagctccaagagtcgccattgcc
tctgggccaagaaaacacgccccagagggttgcctggttggagctaagag
caacccagagggaagcatggtaagtcataacttggggtatcaatgtgaac
gtggattctaacagcatggagggtagacagttgccctcccactgcactgc
ttaaggcatatttaaaaatgggaggttgagtgtgcctttcacctgggaac
aaaaatggtctaaggaaccccacattgggattttttagaatatttttttt
ttattacaagtgataccctgcttaaacagtacacagtccaggcaatctga
actacaaagaactccgtaatcgacgggaactacaattgtcctgtgaccct
ccattaccagagcaatgtgtttgatattgggtgagcatctctctcttcag
acactatttttgttagtttcatgggacattgtcactagaaaataagcaac
acagctacactctgctgtctaggggcacgtgaatcaagatagcaaaccaa
gtggcatccccagtgtttgaccgtgggaccctttacagactggtggacaa
aagaaccgtggaattttgactgaagtttggactgtgtccttagagactgc
tgtcaatttaccccacagaagctgaaacccattcaaatc
tttgttttaagagctgtttggacactacagtgatgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaaccaaaagca
aataacaggtgtctttctcagtcccttttgtttgtttgtttgtttgttta
tagcaggcttttattatgtagccttttctggcctagaattctaatccagg
tcagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_56679605_56680693
seq2: B6Ng01-165O05.b_47_1135

seq1  GAATTCTATGATGATGAGAGACCAAGGCACAAGAACCACAAGATTAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGATGATGAGAGACCAAGGCACAAGAACCACAAGATTAAGGC  50

seq1  CAACCTTGGTTTAAACAATTATTGGGGTTGGAGTTTTAGCTCAGTGGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTGGTTTAAACAATTATTGGGGTTGGAGTTTTAGCTCAGTGGTAG  100

seq1  AGTGTTTGCCTAGCAAGTGCAAGGCCCTGGGTTCGGTCCTCAGCTCTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTGCCTAGCAAGTGCAAGGCCCTGGGTTCGGTCCTCAGCTCTGGG  150

seq1  GAAAAACAAACAAACAACAATAACAACAAAAACCAAGGTAACTGGTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACAAACAAACAACAATAACAACAAAAACCAAGGTAACTGGTTAAA  200

seq1  CAATTGTCGAAGTTTTGTCTTTTACTGTTTATTGTAATGTTATTTGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTCGAAGTTTTGTCTTTTACTGTTTATTGTAATGTTATTTGGTGG  250

seq1  CCTCCAAGACCTGGAGTCTGCACTTAGCTTCTGGGAACCTTCCCCGAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAAGACCTGGAGTCTGCACTTAGCTTCTGGGAACCTTCCCCGAGTT  300

seq1  AATTCTGGTTGGTAAATAAAGACATTAGCAGTCAGTAACTGAGGAGAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGGTTGGTAAATAAAGACATTAGCAGTCAGTAACTGAGGAGAAGA  350

seq1  GACATAGGCAGGGTTTAGGTTTCCTAGGCTAGAGGCCTCGAGGAAGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGGCAGGGTTTAGGTTTCCTAGGCTAGAGGCCTCGAGGAAGAAGA  400

seq1  GAGAGGCAGAGCAGCCGTGGGACAGAGGAGCTCCAAGAGTCGCCATTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAGAGCAGCCGTGGGACAGAGGAGCTCCAAGAGTCGCCATTGCC  450

seq1  TCTGGGCCAAGAAAACACGCCCCAGAGGGTTGCCTGGTTGGAGCTAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCCAAGAAAACACGCCCCAGAGGGTTGCCTGGTTGGAGCTAAGAG  500

seq1  CAACCCAGAGGGAAGCATGGTAAGTCATAACTTGGGGTATCAATGTGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCAGAGGGAAGCATGGTAAGTCATAACTTGGGGTATCAATGTGAAC  550

seq1  GTGGATTCTAACAGCATGGAGGGTAGACAGTTGCCCTCCCACTGCACTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATTCTAACAGCATGGAGGGTAGACAGTTGCCCTCCCACTGCACTGC  600

seq1  TTAAGGCATATTTAAAAATGGGAGGTTGAGTGTGCCTTTCACCTGGGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGCATATTTAAAAATGGGAGGTTGAGTGTGCCTTTCACCTGGGAAC  650

seq1  AAAAATGGTCTAAGGAACCCCACATTGGGATTTTTTAGAATA-TTTTTTT  699
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAAAATGGTCTAAGGAACCCCACATTGGGATTTTTTAGAATATTTTTTTT  700

seq1  TTATTACAAGTGATACCCTGCTTAAACAGTACACAGTCCAGGCAATCTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACAAGTGATACCCTGCTTAAACAGTACACAGTCCAGGCAATCTGA  750

seq1  ACTACAAAGAACTCCGTAATCGACGGGAACTACAATTGTCCTGTGACCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAAGAACTCCGTAATCGACGGGAACTACAATTGTCCTGTGACCCT  800

seq1  CCATTACCAGAGCAATGTGTTTGATATTGGGTGAGCATCTCTCTCTTCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTACCAGAGCAATGTGTTTGATATTGGGTGAGCATCTCTCTCTTCAG  850

seq1  ACACTATTTTTGTTAGTTTCATGGGACATTGTCACTAGAAAATAAGCAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATTTTTGTTAGTTTCATGGGACATTGTCACTAGAAAATAAGCAAC  900

seq1  ACAGCTACACTCTGCTGTCTAGGGGCAACGTGAATCAAAGATAGCAAACC  949
      |||||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  ACAGCTACACTCTGCTGTCTAGGGGC-ACGTGAATC-AAGATAGCAAACC  948

seq1  AAGTGGCATCCCCAGTGTTTGACCGTGGGACACTTTACAGACTGGTGGAC  999
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGTGGCATCCCCAGTGTTTGACCGTGGGACCCTTTACAGACTGGTGGAC  998

seq1  AAAGGAACGGTGAAATTTGTGACTGAAGTTTGGACTGTGTCCTTAGAGAC  1049
      ||| |||| ||| ||||| |||||||||||||||||||||||||||||||
seq2  AAAAGAACCGTGGAATTT-TGACTGAAGTTTGGACTGTGTCCTTAGAGAC  1047

seq1  TGCTGTC-ATTTACCCCACAGAAGCTGAAA-CCATACAAATC  1089
      ||||||| |||||||||||||||||||||| |||| ||||||
seq2  TGCTGTCAATTTACCCCACAGAAGCTGAAACCCATTCAAATC  1089

seq1: chr19_56812873_56813079
seq2: B6Ng01-165O05.g_76_282 (reverse)

seq1  TGACTGACCTGGCTTAGAATTCTAGGCCAGAAAAGGCTACATAATAAGAG  50
      |||||||||||| |||||||||||||||||||||||||||||||||| ||
seq2  TGACTGACCTGGATTAGAATTCTAGGCCAGAAAAGGCTACATAATAAAAG  50

seq1  CCTACTATAAACAAACAAACAAACAAACAAAAGGGACTGAGAAAGACACC  100
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTATAAACAAACAAACAAACAAACAAAAGGGACTGAGAAAGACACC  100

seq1  TGTTATTTACTTCTGGTTTACACACACACACACACACACACACACACACA  150
      |||||||| ||| |||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTGCTTTTGGTTTACACACACACACACACACACACACACACACA  150

seq1  CACACACACACACACACACACACATCACTGTAGTGTCCAAACAGCTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACATCACTGTAGTGTCCAAACAGCTCTTA  200

seq1  AAACAAA  207
      |||||||
seq2  AAACAAA  207