BAC Information

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BAC

Clone NameB6Ng01-166D03
Chromosome19 (Build37)
Map Location 14,981,817 - 15,157,196
singlet/doubletdoublet
Overlap geneEG433225
Upstream geneOlfr1505, EG667433, Tle4
Downstream geneEG635497, Pomc-ps1, LOC667482, Psat1, LOC100041424, Cep78, LOC100042048
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166D03.bB6Ng01-166D03.g
ACCDH958040DH958041
length1,2041,106
definitionDH958040|Mus musculus domesticus DNA, BAC clone: B6Ng01-166D03, 5' end.DH958041|Mus musculus domesticus DNA, BAC clone: B6Ng01-166D03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,981,817 - 14,983,050)(15,156,079 - 15,157,196)
sequence
gaattctgcttcaacctctgagttgctctctgcccatggttcctagaaca
ctgctgcagttcttccctctggttgtttttggacaccagtgtgaaccagt
atcctactgacctcagccagaccctgtgctgtacatgtcttcagctcttg
ggtgccactgtcagttattgatccagtctactgtagcccagccgactgtt
tctacaataccaattccttctgcattctagtgacctctctaaagtgactt
gctgtcttgagcaccagcttctcgttcatgtccactcctccctgcatcct
tatggagatattacctggcttgatacattcagtaacagttattttctctg
gaccatgcatgtttatggcccatccatgttattatttatgtagtcaatgt
gtcagtgtaagtgttgctgtggtatccttcatatgccctctttgaatccc
ctgatattgttccctttcttccagggctgaacctgtgtcactttgtatca
gttgccatgatcatctttctatttcttatatctttggttgtaagcctagc
ctttatgggctgagccgtctctccagcccttctttttatttctttatggc
tctgtttagagaatgcaaattttgtaaaacattctcaggagaaaaatgta
tatgtgtgcactatgccttgattagattgtaccaagttgttctccagaga
ctaagttcactcgtcctccagttcgctacatatggaaaatggcaagatcc
atttcacagatttttgtattagatagttctcagggttgtacaactgtgga
aagtataaaaagaactctttcctcttcattcacatttttttttctgatga
ctcctgtattggagctggtctgtaagttgcatgtgtttatctccctttac
tatctttgtgtcttctctctagaaagtgcctttgtggcagtaatgtgagt
ccatgatccctggaatatatcccttccataaaaggtgctagcttcctgga
attccttccattacacacagaaagcaatccttcatattttccaattcctc
gttgtccatgaataaatctactgtgctctgtgcaggtttcagctttgcag
catcagttttatttagagggttacatagtagtgaagggatgttactgaat
ctggataattaaataaccgttgactgacctcggaaactaggtctactgat
atgt
gaattctccatggtaatcaggtacctagagaccccgagggcatagccaat
aagcttcccttcccagacattcctccctgccaaaggtatttaaactcggg
tctaccctgagaagttggtactgtatggtatgcatctattttccaccatg
aacagtctctttcatctaccactgttatagggaacatgtagaaggtcttt
gcctacaaagtgcagcctctctgcactcctagacaactgctaccaagcta
agtatgttcactgctgagcaaagctggaactcccctttaccctgacctgg
gctagatgctgttcccaactcttccagtgaattgacacattaggtaaaat
ggcttaacgctgatataaattcatgcaagaatcaaaagaataaaattaaa
aagctgtggcataaaacatggatattccagtagtcatctaataactaaag
agggacatgaatactatgggtcaagcagcacatggaggggggttgtgact
gtgagaagaaagggggacagcgtacagtttaataggaaatgcctattttt
aaaaaaaaaaaaaaaagcatgaaaagcagacatatggttaatgtttgaac
attttccatgaccaatatgaatggggaaacagaagcagggccatttttgt
ttgtttgtctgttttccagtatttaaaataacactggcctttttattcct
ttatattaaaaaataagaaaaaagaaactaaaatacttatttatgtgttt
tataatggctagcagaggctgtatagaaggtagccaaattaaataagaac
atgatattccaaacaattaattatgtaaacaaacataatgccagaaattt
ggcattgctttatcccaatagaattcaatgttttatgttatcatgaaaga
aacacagaataaattctgtattttttctttttgagtattgtatatgatat
cagatgttgctgttttgattcagccaagttatcaaacagggaaataatga
gatactaaagcagacactagaagtctatgttataaaagtccaagcaaaga
agccacctagggactgtttgtaagatagaggaataatttcagcgtcttcc
tattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14981817_14983050
seq2: B6Ng01-166D03.b_42_1245

seq1  GAATTCTGCTTCAACCTCTGAGTTGCTCTCTGCCCATGGTTCCTAGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTTCAACCTCTGAGTTGCTCTCTGCCCATGGTTCCTAGAACA  50

seq1  CTGCTGCAGTTCTTCCCTCTGGTTGTTTTTGGACACCAGTGTGAACCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCAGTTCTTCCCTCTGGTTGTTTTTGGACACCAGTGTGAACCAGT  100

seq1  ATCCTACTGACCTCAGCCAGACCCTGTGCTGTACATGTCTTCAGCTCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTACTGACCTCAGCCAGACCCTGTGCTGTACATGTCTTCAGCTCTTG  150

seq1  GGTGCCACTGTCAGTTATTGATCCAGTCTACTGTAGCCCAGCCGACTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCACTGTCAGTTATTGATCCAGTCTACTGTAGCCCAGCCGACTGTT  200

seq1  TCTACAATACCAATTCCTTCTGCATTCTAGTGACCTCTCTAAAGTGACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAATACCAATTCCTTCTGCATTCTAGTGACCTCTCTAAAGTGACTT  250

seq1  GCTGTCTTGAGCACCAGCTTCTCGTTCATGTCCACTCCTCCCTGCATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTTGAGCACCAGCTTCTCGTTCATGTCCACTCCTCCCTGCATCCT  300

seq1  TATGGAGATATTACCTGGCTTGATACATTCAGTAACAGTTATTTTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGATATTACCTGGCTTGATACATTCAGTAACAGTTATTTTCTCTG  350

seq1  GACCATGCATGTTTATGGCCCATCCATGTTATTATTTATGTAGTCAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGCATGTTTATGGCCCATCCATGTTATTATTTATGTAGTCAATGT  400

seq1  GTCAGTGTAAGTGTTGCTGTGGTATCCTTCATATGCCCTCTTTGAATCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGTAAGTGTTGCTGTGGTATCCTTCATATGCCCTCTTTGAATCCC  450

seq1  CTGATATTGTTCCCTTTCTTCCAGGGCTGAACCTGTGTCACTTTGTATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATTGTTCCCTTTCTTCCAGGGCTGAACCTGTGTCACTTTGTATCA  500

seq1  GTTGCCATGATCATCTTTCTATTTCTTATATCTTTGGTTGTAAGCCTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCATGATCATCTTTCTATTTCTTATATCTTTGGTTGTAAGCCTAGC  550

seq1  CTTTATGGGCTGAGCCGTCTCTCCAGCCCTTCTTTTTATTTCTTTATGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGGGCTGAGCCGTCTCTCCAGCCCTTCTTTTTATTTCTTTATGGC  600

seq1  TCTGTTTAGAGAATGCAAATTTTGTAAAACATTCTCAGGAGAAAAATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTAGAGAATGCAAATTTTGTAAAACATTCTCAGGAGAAAAATGTA  650

seq1  TATGTGTGCACTATGCCTTGATTAGATTGTACCAAGTTGTTCTCCAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGCACTATGCCTTGATTAGATTGTACCAAGTTGTTCTCCAGAGA  700

seq1  CTAAGTTCACTCGTCCTCCAGTTCGCTACATATGGAAAATGGCAAGATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTCACTCGTCCTCCAGTTCGCTACATATGGAAAATGGCAAGATCC  750

seq1  ATTTCACAGATTTTTGTATTAGATAGTTCTCAGGGTTGTACAACTGTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACAGATTTTTGTATTAGATAGTTCTCAGGGTTGTACAACTGTGGA  800

seq1  AAGTATAAAAAGAACTCTTTCCTCTTCATTCACATTTTTTTTTCTGATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAAAAAGAACTCTTTCCTCTTCATTCACATTTTTTTTTCTGATGA  850

seq1  CTCCTGTATTGGAGCTGGTCTGTAAGTTGCATGTGTTTATCTCCCTTTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTATTGGAGCTGGTCTGTAAGTTGCATGTGTTTATCTCCCTTTAC  900

seq1  TATCTTTGTGTCTTCTCTCTAGAAAGTGCCTTTGTGGCAGTAATGTGAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTGTGTCTTCTCTCTAGAAAGTGCCTTTGTGGCAGTAATGTGAGT  950

seq1  CCATGATCCCTGGAATATATCCCTTCCATAAAAAGGTGCTAGCTTCCTGG  1000
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCATGATCCCTGGAATATATCCCTTCCAT-AAAAGGTGCTAGCTTCCTGG  999

seq1  AATTCCTTCCATTACACAACAGAAAGCAAATCCTTTCATATTTTCCAATT  1050
      ||||||||||||||||| ||||||||| ||||| ||||||||||||||||
seq2  AATTCCTTCCATTACAC-ACAGAAAGC-AATCC-TTCATATTTTCCAATT  1046

seq1  CCTCGTTTGTCCATGGAATAAATTCTAACTGTGCTCTGGTGCAGGGTTTC  1100
      ||||| |||||||| ||||||| ||| |||||||||| ||||| ||||||
seq2  CCTCG-TTGTCCAT-GAATAAA-TCT-ACTGTGCTCT-GTGCA-GGTTTC  1090

seq1  AGGCTTTGCAGCATCAGTTTTATTTTAAGAGTGTTAACATAGTAGTGAGG  1150
      | |||||||||||||||||||||||  |||| ||| |||||||||||| |
seq2  A-GCTTTGCAGCATCAGTTTTATTT--AGAGGGTT-ACATAGTAGTGAAG  1136

seq1  GGAATGTATACTTAATTCTGAATAATTAAAAATAACACGTTTAGCATGAC  1200
      || |||| |||| || |||| ||||||  ||||||| ||||  |  ||||
seq2  GG-ATGT-TACTGAA-TCTGGATAATT--AAATAAC-CGTT--GACTGAC  1178

seq1  CTTCAGAAGAAAACTAGGTACTACTGAAATATGT  1234
      ||      | ||||||||| ||||||  ||||||
seq2  CT-----CGGAAACTAGGT-CTACTG--ATATGT  1204

seq1: chr19_15156079_15157196
seq2: B6Ng01-166D03.g_67_1172 (reverse)

seq1  ATAATAGGAAGACGCTGAATTTATTCCTCTATCCTCTACCAAACTGTCTC  50
      ||||||||||||||||||| |||||||||||   |||  ||||| ||| |
seq2  ATAATAGGAAGACGCTGAAATTATTCCTCTA---TCTTACAAACAGTC-C  46

seq1  CTTGGTG--CTCTGTGCTTTGGACTTTTATAACATAGACTTTCTAGTGTC  98
      || ||||   ||| ||| ||||||||||||||||||||| ||||||||||
seq2  CTAGGTGGCTTCTTTGC-TTGGACTTTTATAACATAGAC-TTCTAGTGTC  94

seq1  TGCTTTAGTATCTCATTTATTTTCCTGTTTGATAAACTTGGCTGAATCAA  148
      ||||||||||||||| |||||| |||||||||| |||||||||||||| |
seq2  TGCTTTAGTATCTCA-TTATTTCCCTGTTTGAT-AACTTGGCTGAATC-A  141

seq1  AAACAGCAACATCTTGATATCATATACAAATACTTCAAAAAGAAAAAATA  198
      ||||||||||||| ||||||||||||| ||||| ||||||||||||||||
seq2  AAACAGCAACATC-TGATATCATATAC-AATAC-TCAAAAAGAAAAAATA  188

seq1  CAGAATTTTTATTCTGTGTTTCTTTCATGATAACATAAAACATTGAATTC  248
      |||||  |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAA--TTTATTCTGTGTTTCTTTCATGATAACATAAAACATTGAATTC  236

seq1  TATTGGGATAAAGCAATGCCAAATTTCTGGCATTATGTTTGTTTACATAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGATAAAGCAATGCCAAATTTCTGGCATTATGTTTGTTTACATAA  286

seq1  TTAATTGTTTGGAATATCATGTTCTTATTTAATTTGGCTACCTTCTATAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGTTTGGAATATCATGTTCTTATTTAATTTGGCTACCTTCTATAC  336

seq1  AGCCTCTGCTAGCCATTATAAAACACATAAATAAGTATTTTAGTTTCTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTGCTAGCCATTATAAAACACATAAATAAGTATTTTAGTTTCTTT  386

seq1  TTTCTTATTTTTTAATATAAAGGAATAAAAAGGCCAGTGTTATTTTAAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATTTTTTAATATAAAGGAATAAAAAGGCCAGTGTTATTTTAAAT  436

seq1  ACTGGAAAACAGACAAACAAACAAAAATGGCCCTGCTTCTGTTTCCCCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAAACAGACAAACAAACAAAAATGGCCCTGCTTCTGTTTCCCCAT  486

seq1  TCATATTGGTCATGGAAAATGTTCAAACATTAACCATATGTCTGCTTTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTGGTCATGGAAAATGTTCAAACATTAACCATATGTCTGCTTTTC  536

seq1  ATGCTTTTTTTTTTTTTTTTAAAAATAGGCATTTCCTATTAAACTGTACG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTTTTTTTTTTTTTTAAAAATAGGCATTTCCTATTAAACTGTACG  586

seq1  CTGTCCCCCTTTCTTCTCACAGTCACAACCCCCCTCCATGTGCTGCTTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCCCTTTCTTCTCACAGTCACAACCCCCCTCCATGTGCTGCTTGA  636

seq1  CCCATAGTATTCATGTCCCTCTTTAGTTATTAGATGACTACTGGAATATC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAGTATTCATGTCCCTCTTTAGTTATTAGATGACTACTGGAATATC  686

seq1  CATGTTTTATGCCACAGCTTTTTAATTTTATTCTTTTGATTCTTGCATGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTATGCCACAGCTTTTTAATTTTATTCTTTTGATTCTTGCATGA  736

seq1  ATTTATATCAGCGTTAAGCCATTTTACCTAATGTGTCAATTCACTGGAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATCAGCGTTAAGCCATTTTACCTAATGTGTCAATTCACTGGAAG  786

seq1  AGTTGGGAACAGCATCTAGCCCAGGTCAGGGTAAAGGGGAGTTCCAGCTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGAACAGCATCTAGCCCAGGTCAGGGTAAAGGGGAGTTCCAGCTT  836

seq1  TGCTCAGCAGTGAACATACTTAGCTTGGTAGCAGTTGTCTAGGAGTGCAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGCAGTGAACATACTTAGCTTGGTAGCAGTTGTCTAGGAGTGCAG  886

seq1  AGAGGCTGCACTTTGTAGGCAAAGACCTTCTACATGTTCCCTATAACAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTGCACTTTGTAGGCAAAGACCTTCTACATGTTCCCTATAACAGT  936

seq1  GGTAGATGAAAGAGACTGTTCATGGTGGAAAATAGATGCATACCATACAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGATGAAAGAGACTGTTCATGGTGGAAAATAGATGCATACCATACAG  986

seq1  TACCAACTTCTCAGGGTAGACCCGAGTTTAAATACCTTTGGCAGGGAGGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAACTTCTCAGGGTAGACCCGAGTTTAAATACCTTTGGCAGGGAGGA  1036

seq1  ATGTCTGGGAAGGGAAGCTTATTGGCTATGCCCTCGGGGTCTCTAGGTAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGGGAAGGGAAGCTTATTGGCTATGCCCTCGGGGTCTCTAGGTAC  1086

seq1  CTGATTACCATGGAGAATTC  1118
      ||||||||||||||||||||
seq2  CTGATTACCATGGAGAATTC  1106