BAC Information

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BAC

Clone NameB6Ng01-167L17
Chromosome19 (Build37)
Map Location 35,385,040 - 35,514,386
singlet/doubletdoublet
Overlap geneLOC100042292
Upstream geneFas, Ch25h, Lipa, Ifit2, Ifit3, OTTMUSG00000016644, LOC667370, 2010002M12Rik, Ifit1, Slc16a12, LOC676714, Pank1, Mphosph1, LOC383464
Downstream geneA830019P07Rik, Htr7, Rpp30, Ankrd1, LOC668195, Pcgf5, LOC668201
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167L17.bB6Ng01-167L17.g
ACCDH959149DH959150
length1,158969
definitionDH959149|Mus musculus domesticus DNA, BAC clone: B6Ng01-167L17, 5' end.DH959150|Mus musculus domesticus DNA, BAC clone: B6Ng01-167L17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,513,219 - 35,514,386)(35,385,040 - 35,386,006)
sequence
gaattctagtgcatactgaagaccagttgtgacgtccagccttatggact
gaaaaacgactagattcttggacctttcattgatagacaaccattgctgg
actagctggactggtctgaatacagtctaataaatcacttctataatcac
tgttcctctagagaaccctgactaaaacagaagccatggttgataatcca
agtttcacatgcttctttcatgacagttgctgttataggagcattttatt
aacttctgtggctaagtactatcagcttaggggagggttgcctactgccc
atcagtgtccttaaatatcggataccagtggtgtccaactcttgacacca
gcagtgtttttctacttctggacttgtgattttctacctatacattacta
gaaccgtgacaccagatattttgtgcatataatagagaaaatgctgccat
ttctcatttatagaaattttataatatgaattctatcagaaatatgattt
atgaaagaaatgattaatgaataattattattggaattcttgaacgcaat
gaactgtttgcaaccagcaaaaacaacttctagttctagaattaaaagtt
catggtatggtcagcaagagcagaaagtggagaaaaagccgaaaatgact
gtataaaaatgtagaaagaatcttaagcatgggaagccttgaatacatgg
gagcggtagtggaaatataggaaatggaagtagataaaacaagaaggaag
gaaaaggcataataatgagccaaagttctccttagagttgcagtctagat
taaaccattggtaggatgcagagtgatgggcaatgtccttttaatcccta
ttgcttaaggaaaaccacgtgataccttgtacatagaagaaaagtggagt
ggatgatccagaaagtgacattcatgcataggtgcatacttagctgccat
tatatataatgagagggttgggatctttggggtgatagccagacctatta
ctatgtagtgtgaaaggaaaagtctatactcccaactatttatattacaa
ttagtacattggataacagactatttttctaatgagtatcatgcatggat
cttaccagattactggctgcattcttagtatgacagaaccattttaaacc
aggtttcc
gaattcaggtctccggtagcaatgtaagttctgggtgggcaggatggccc
tcctgtaatcacagaatgtgggaagtggagacaggatcccaggaaaagct
agttggctgtgtaagctgagtcctgaggttttggattcaagtgagagaga
cccttcctctccttacaaagtggagaatgatcaagaaagacaccttacat
cattctctggcctctgcatgtatgtacacacatatagacacatatcctca
cacacatgtattgtataaacatacataaccatgagcatggatatatatat
atatatatatatatatatatatatatatatatatacacacacacatcttt
taaaagttattgatcaccccaagaatttttgagtgaacctttcttgatgt
tggtcacaccataaataaagtctaaaaaatggttattaatccaaacaaaa
taattaaaatctgtagtgttgtgagaccccgacttagagcatttctccct
agaaggcaaagcccctggatgttccccaagcttgttttccctgatctcta
aaacaaaacaaaacaaaacaaaacaaaaacaaacaaacaaacaaacaaac
aaacaaaaaacagccagaaagaagctctttgttctctatagccagcaaaa
agcctttttgttcctgggccttacagccagagatgcaggaagacctacaa
ggacatggagatagacaccagagaggaggctgcagctcactcccacccct
caccagaaaggagctgtagccaactctcctcccaactcctcccaattcct
cagctagctgttaaaagccccctactgttaccactcagggtcgaactccc
ctgctctgtgaggcagaagggggttcgtcctcagctagctgataataaaa
cctcttgcagtttgcatcagtgtggttttctctcagtcgttggggtgttg
gccagctcatcccgggact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_35513219_35514386
seq2: B6Ng01-167L17.b_43_1200 (reverse)

seq1  GGAAACTGTGTTTAAAATTGTTTCTGACATATTAAGAAATGCAGACAGGT  50
      ||||||   |||||||| || ||||| |||| |||| ||||||| |||  
seq2  GGAAACCTGGTTTAAAA-TGGTTCTGTCATACTAAG-AATGCAGCCAGTA  48

seq1  ATCTGGTAAGATCAATGCATGAATACTCATTAAGAAAAATAGTCTGTTAT  100
      ||||||||||||| ||||||| ||||||||| ||||||||||||||||||
seq2  ATCTGGTAAGATCCATGCATG-ATACTCATT-AGAAAAATAGTCTGTTAT  96

seq1  CCAATTGTACTAATTGTATATTAAAATAAGTTGGGAGTAATAGACTTTTT  150
      |||| ||||||||||||| ||  |||| |||||||||| |||||| ||||
seq2  CCAA-TGTACTAATTGTA-ATATAAAT-AGTTGGGAGT-ATAGAC-TTTT  141

seq1  CCTTTCACACTACATAGTAATTAGGTCTGGCTATCACCCCAAAGATCCCA  200
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCTTTCACACTACATAGTAA-TAGGTCTGGCTATCACCCCAAAGATCCCA  190

seq1  ACCCTCTCATTATATATAATGGCAGCTAAGTATGCACCTATGCATGAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTCATTATATATAATGGCAGCTAAGTATGCACCTATGCATGAATG  240

seq1  TCACTTTCTGGATCATCCACTCCACTTTTCTTCTATGTACAAGGTATCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTCTGGATCATCCACTCCACTTTTCTTCTATGTACAAGGTATCAC  290

seq1  GTGGTTTTCCTTAAGCAATAGGGATTAAAAGGACATTGCCCATCACTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTTCCTTAAGCAATAGGGATTAAAAGGACATTGCCCATCACTCTG  340

seq1  CATCCTACCAATGGTTTAATCTAGACTGCAACTCTAAGGAGAACTTTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTACCAATGGTTTAATCTAGACTGCAACTCTAAGGAGAACTTTGGC  390

seq1  TCATTATTATGCCTTTTCCTTCCTTCTTGTTTTATCTACTTCCATTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATTATGCCTTTTCCTTCCTTCTTGTTTTATCTACTTCCATTTCCT  440

seq1  ATATTTCCACTACCGCTCCCATGTATTCAAGGCTTCCCATGCTTAAGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCCACTACCGCTCCCATGTATTCAAGGCTTCCCATGCTTAAGATT  490

seq1  CTTTCTACATTTTTATACAGTCATTTTCGGCTTTTTCTCCACTTTCTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTACATTTTTATACAGTCATTTTCGGCTTTTTCTCCACTTTCTGCT  540

seq1  CTTGCTGACCATACCATGAACTTTTAATTCTAGAACTAGAAGTTGTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGACCATACCATGAACTTTTAATTCTAGAACTAGAAGTTGTTTTT  590

seq1  GCTGGTTGCAAACAGTTCATTGCGTTCAAGAATTCCAATAATAATTATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTTGCAAACAGTTCATTGCGTTCAAGAATTCCAATAATAATTATTC  640

seq1  ATTAATCATTTCTTTCATAAATCATATTTCTGATAGAATTCATATTATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCATTTCTTTCATAAATCATATTTCTGATAGAATTCATATTATAA  690

seq1  AATTTCTATAAATGAGAAATGGCAGCATTTTCTCTATTATATGCACAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTATAAATGAGAAATGGCAGCATTTTCTCTATTATATGCACAAAA  740

seq1  TATCTGGTGTCACGGTTCTAGTAATGTATAGGTAGAAAATCACAAGTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGTGTCACGGTTCTAGTAATGTATAGGTAGAAAATCACAAGTCCA  790

seq1  GAAGTAGAAAAACACTGCTGGTGTCAAGAGTTGGACACCACTGGTATCCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGAAAAACACTGCTGGTGTCAAGAGTTGGACACCACTGGTATCCG  840

seq1  ATATTTAAGGACACTGATGGGCAGTAGGCAACCCTCCCCTAAGCTGATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAGGACACTGATGGGCAGTAGGCAACCCTCCCCTAAGCTGATAG  890

seq1  TACTTAGCCACAGAAGTTAATAAAATGCTCCTATAACAGCAACTGTCATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGCCACAGAAGTTAATAAAATGCTCCTATAACAGCAACTGTCATG  940

seq1  AAAGAAGCATGTGAAACTTGGATTATCAACCATGGCTTCTGTTTTAGTCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGCATGTGAAACTTGGATTATCAACCATGGCTTCTGTTTTAGTCA  990

seq1  GGGTTCTCTAGAGGAACAGTGATTATAGAAGTGATTTATTAGACTGTATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTCTAGAGGAACAGTGATTATAGAAGTGATTTATTAGACTGTATT  1040

seq1  CAGACCAGTCCAGCTAGTCCAGCAATGGTTGTCTATCAATGAAAGGTCCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCAGTCCAGCTAGTCCAGCAATGGTTGTCTATCAATGAAAGGTCCA  1090

seq1  AGAATCTAGTCGTTTTTCAGTCCATAAGGCTGGACGTCACAACTGGTCTT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTAGTCGTTTTTCAGTCCATAAGGCTGGACGTCACAACTGGTCTT  1140

seq1  CAGTATGCACTAGAATTC  1168
      ||||||||||||||||||
seq2  CAGTATGCACTAGAATTC  1158

seq1: chr19_35385040_35386006
seq2: B6Ng01-167L17.g_68_1034

seq1  GAATTCAGGTCTCCGGTAGCAATGTAAGTTCTGGGTGGGCAGGATGGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCTCCGGTAGCAATGTAAGTTCTGGGTGGGCAGGATGGCCC  50

seq1  TCCTGTAATCACAGAATGTGGGAAGTGGAGACAGGATCCCAGGAAAAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTAATCACAGAATGTGGGAAGTGGAGACAGGATCCCAGGAAAAGCT  100

seq1  AGTTGGCTGTGTAAGCTGAGTCCTGAGGTTTTGGATTCAAGTGAGAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCTGTGTAAGCTGAGTCCTGAGGTTTTGGATTCAAGTGAGAGAGA  150

seq1  CCCTTCCTCTCCTTACAAAGTGGAGAATGATCAAGAAAGACACCTTACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCTCTCCTTACAAAGTGGAGAATGATCAAGAAAGACACCTTACAT  200

seq1  CATTCTCTGGCCTCTGCATGTATGTACACACATATAGACACATATCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTGGCCTCTGCATGTATGTACACACATATAGACACATATCCTCA  250

seq1  CACACATGTATTGTATAAACATACATAACCATGAGCATGGATATATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATGTATTGTATAAACATACATAACCATGAGCATGGATATATATAT  300

seq1  ATATATATATATATATATATATATATATATATATACACACACACATCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATACACACACACATCTTT  350

seq1  TAAAAGTTATTGATCACCCCAAGAATTTTTGAGTGAACCTTTCTTGATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTATTGATCACCCCAAGAATTTTTGAGTGAACCTTTCTTGATGT  400

seq1  TGGTCACACCATAAATAAAGTCTAAAAAATGGTTATTAATCCAAACAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACACCATAAATAAAGTCTAAAAAATGGTTATTAATCCAAACAAAA  450

seq1  TAATTAAAATCTGTAGTGTTGTGAGACCCCGACTTAGAGCATTTCTCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAAATCTGTAGTGTTGTGAGACCCCGACTTAGAGCATTTCTCCCT  500

seq1  AGAAGGCAAAGCCCCTGGATGTTCCCCAAGCTTGTTTTCCCTGATCTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCAAAGCCCCTGGATGTTCCCCAAGCTTGTTTTCCCTGATCTCTA  550

seq1  AAACAAAACAAAACAAAACAAAACAAAAACAAACAAACAAACAAACAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAACAAAACAAAACAAAAACAAACAAACAAACAAACAAAC  600

seq1  AAACAAAAAACAGCCAGAAAGAAGCTCTTTGTTCTCTATAGCCAGCAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAACAGCCAGAAAGAAGCTCTTTGTTCTCTATAGCCAGCAAAA  650

seq1  AGCCTTTTTGTTCCTGGGCCTTACAGCCAGAGATGCAGGAAGACCTACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTTTGTTCCTGGGCCTTACAGCCAGAGATGCAGGAAGACCTACAA  700

seq1  GGACATGGAGATAGACACCAGAGAGGAGGCTGCAGCTCACTCCCACCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGGAGATAGACACCAGAGAGGAGGCTGCAGCTCACTCCCACCCCT  750

seq1  CACCAGAAAGGAGCTGTAGCCAACTCTCCTCCCAACTCCTCCCAATTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAAAGGAGCTGTAGCCAACTCTCCTCCCAACTCCTCCCAATTCCT  800

seq1  CAGCTAGCTGTTAAAAGCCCCCTACTGTTACCACTCAGGGTCGAACTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGCTGTTAAAAGCCCCCTACTGTTACCACTCAGGGTCGAACTCCC  850

seq1  CTGCCCTGTGAGGCAGAA-GGGGTTCGTCCTCAGCTAGCTGATAATAAAA  899
      |||| ||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTGCTCTGTGAGGCAGAAGGGGGTTCGTCCTCAGCTAGCTGATAATAAAA  900

seq1  CCTCTTGCAGTTTGCATCAGGTGTGGTTTTCTCTCAGTCGTTGGGGTGTT  949
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCTCTTGCAGTTTGCATCA-GTGTGGTTTTCTCTCAGTCGTTGGGGTGTT  949

seq1  GGCCAGCTCATCCCGGGA  967
      ||||||||||||||||||
seq2  GGCCAGCTCATCCCGGGA  967