BAC Information

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BAC

Clone NameB6Ng01-167M18
Chromosome19 (Build37)
Map Location 10,251,401 - 10,370,493
singlet/doubletdoublet
Overlap geneLOC100040227, Fads1, Fen1, 1810006K21Rik, Gm98, Dagla
Upstream geneEG621699, LOC100040104, LOC623810, Pcna-ps2, LOC100040130, LOC100040137, LOC100040143, LOC100040152, Stxbp3b, LOC623688, LOC100040178, LOC100040192, 6720475J19Rik, LOC100040203, Incenp, LOC100040215, Fth1, Best1, Rab3il1, Fads3, Fads2
Downstream geneSyt7, Gm705, 4930579J09Rik, 0610038F07Rik, 5730453I16Rik, 2810441K11Rik, Tmem138, Cybasc3, Dak, Ddb1, Vwce, Pga5, 2210404E10Rik, Vps37c, Cd5, Cd6, Slc15a3, Tmem132a, Tmem109, Prpf19, Zp1, Gpr44, Ccdc86, Ms4a10, E530011F12Rik, 5033428B15Rik, AW112010, Ms4a8a, Gm336, LOC624395, 1700025F22Rik, Ms4a13, Ms4a12, Ms4a1, Ms4a5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167M18.bB6Ng01-167M18.g
ACCDH959199DH959200
length1,139899
definitionDH959199|Mus musculus domesticus DNA, BAC clone: B6Ng01-167M18, 5' end.DH959200|Mus musculus domesticus DNA, BAC clone: B6Ng01-167M18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,369,344 - 10,370,493)(10,251,401 - 10,252,299)
sequence
gaattcttctcaagggtactttcagttctggccaggctgccgataaaaag
gtcatcatcaagctgagctcctactatgcatcaaactgagctcctactat
gcattggacttttgcatggagctaggagacataagaggaaagtcaccaga
ttattccccgtccgtggctgacacatgacacttaactccctggtgtcctt
ccagacccagttcaaagtactccaggctcagggtcacgtttaatgcagag
tattggcggcttctgtgttgtggacacttagctcctttgcactcaagact
gtcccatggcacctaggaagagaagtgagtgtttcacagaacctcgcttc
cttggatgtccaggaactctgttagaagccacgtccctgctgccagtcag
tgtggctcccaccttcagggtgctgatcctgcttgctgcgaacctctccc
actggccgactttgtgggcccctgggtagccatcctccttttggataccc
cattgctgagaacaccaatctcctgcactcccaggaagccccaggtctgt
tccccatgtgtaggctgagttgtcatttgtcgctgctgctcagcttccca
gccctgtcctcctcagaccccacacctccctggccttggcaacgcctttc
aggctcacacaggacggttcctctctccccgcatgccccctgccagtgct
gttgagcggtttcagattgttccccttgccgcctgcctgccatactatgc
agtttaataaacaggctaatggaggctctgggcacctcagagccgccttc
cctgtttcttggtccctttagagagcctgtccccctctcttccccaggtg
agccccattcagcaggcttctgggagcggtaactaagctgggcgcccagc
ccaccacctgcttagtactttataaagtttaaccttaatggtgtaatgaa
ctcccgtcataaagcagctggagcagtgcatcctggatgtataaatatag
gagccctctgaagttgtaattggaaatggcagcaactggatgttgaaagc
gcgctcatggggctgagcgcagctattcttttacttctttcaaggcacac
agaactgtgtcttgctgccaagaaaagatgttctcagac
gaattcttttgagcagcataacaaacccaatattttagagagtgaagcaa
tgggaattttgattcatggagtgtcagccctggaatgtggtgaagttttc
ttggcttagaactgggtgtgctatcactcccacactggaagccgcgtcca
caatagccttgaccctgggatgacctcagcagcaaggggggggggcaagt
ctcatcccctcaccatcagctcctaagactcagctcttctattcacaagt
caaaggtatgatgagctgaaacagtactgagtatggtcgtgcccggcaac
ctaagggttgtaacattcttgtaacaacagaatctcaaatcacatgtgct
gaactttcagccaatcgcagtctgcaaattgcccagcgacatgtgtataa
gacaactactgagatgttactaatcggcttcttcctctacatcacttcct
tttcctgcccataaatatccccagcccctttgcttcatggaaccttcttt
ctgaaccttctctcggctcaggctactctctgattcctaagtcttttctc
agcacaaataaagcctgctaaatttaattagtctaaaggtgttttctttc
cttcttatattaacagctggatgagggcttaattgtgattttaattgact
tccagagggtttcaggtcagttctactcctagtaaggctcctggagttgt
gcttggagctctcaaactatctctgaacaattttagctgcagagagccca
tgatttgatcagctctaacaattaactagtctggatctagttaagagagc
tcaggtattttttaaaaaacagatactctttaaatctaggaagtctggga
atctaagagtctagttctctctctctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_10369344_10370493
seq2: B6Ng01-167M18.b_47_1185 (reverse)

seq1  GTCTGAGGACATTCTTTCTTCGCAGCCAGACACAGTTCTGTGTGCCTTTT  50
      ||||||| ||||  |||||| ||||| |||||||||||||||||||  ||
seq2  GTCTGAGAACATCTTTTCTTGGCAGCAAGACACAGTTCTGTGTGCC--TT  48

seq1  GAAAGGAAGT-AGAGAATAGCTGCGCTCAGCCCAATGAGGCCGGCCGCTT  99
      |||| ||||| | |||||||||||||||||||| |||||  ||  |||||
seq2  GAAA-GAAGTAAAAGAATAGCTGCGCTCAGCCCCATGAG--CG--CGCTT  93

seq1  TCAACATTCCAGTTGCTGCCATTTCCAATTACAACTTCAGAGGGCTCCTA  149
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACA-TCCAGTTGCTGCCATTTCCAATTACAACTTCAGAGGGCTCCTA  142

seq1  TAATTTATACATCCCAGGATGCACTGCTCCAGCTGCTTTATGACGGGAGT  199
      | |||||||||| |||||||||||||||||||||||||||||||||||||
seq2  T-ATTTATACAT-CCAGGATGCACTGCTCCAGCTGCTTTATGACGGGAGT  190

seq1  TCATTACACCATTAAGGTTAAACTTTTATAAAGTACTAAGCAGGTGGTGG  249
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCATTACACCATTAAGGTTAAAC-TTTATAAAGTACTAAGCAGGTGGTGG  239

seq1  GCTGGGCGCCCAGCTTAGTTACCGCTCCCAGAAGCCTGCTGAATGGGGCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCGCCCAGCTTAGTTACCGCTCCCAGAAGCCTGCTGAATGGGGCT  289

seq1  CACCTGGGGAAGAGAGGGGGACAGGCTCTCTAAAGGGACCAAGAAACAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGGGAAGAGAGGGGGACAGGCTCTCTAAAGGGACCAAGAAACAGG  339

seq1  GAAGGCGGCTCCTGAGGTGCCCAGAGCCTCCATTAGCCTGTTTATTAAAC  399
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCGGCT-CTGAGGTGCCCAGAGCCTCCATTAGCCTGTTTATTAAAC  388

seq1  TGCATAGTATGGCAGGCAGGCGGCAAGGGGAACAATCTGAAACCGCTCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGTATGGCAGGCAGGCGGCAAGGGGAACAATCTGAAACCGCTCAA  438

seq1  CAGCACTGGCAGGGGGCATGCGGGGAGAGAGGAACCGTCCTGTGTGAGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTGGCAGGGGGCATGCGGGGAGAGAGGAACCGTCCTGTGTGAGCC  488

seq1  TGAAAGGCGTTGCCAAGGCCAGGGAGGTGTGGGGTCTGAGGAGGACAGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGCGTTGCCAAGGCCAGGGAGGTGTGGGGTCTGAGGAGGACAGGG  538

seq1  CTGGGAAGCTGAGCAGCAGCGACAAATGACAACTCAGCCTACACATGGGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAGCTGAGCAGCAGCGACAAATGACAACTCAGCCTACACATGGGG  588

seq1  AACAGACCTGGGGCTTCCTGGGAGTGCAGGAGATTGGTGTTCTCAGCAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACCTGGGGCTTCCTGGGAGTGCAGGAGATTGGTGTTCTCAGCAAT  638

seq1  GGGGTATCCAAAAGGAGGATGGCTACCCAGGGGCCCACAAAGTCGGCCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTATCCAAAAGGAGGATGGCTACCCAGGGGCCCACAAAGTCGGCCAG  688

seq1  TGGGAGAGGTTCGCAGCAAGCAGGATCAGCACCCTGAAGGTGGGAGCCAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGAGGTTCGCAGCAAGCAGGATCAGCACCCTGAAGGTGGGAGCCAC  738

seq1  ACTGACTGGCAGCAGGGACGTGGCTTCTAACAGAGTTCCTGGACATCCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACTGGCAGCAGGGACGTGGCTTCTAACAGAGTTCCTGGACATCCAA  788

seq1  GGAAGCGAGGTTCTGTGAAACACTCACTTCTCTTCCTAGGTGCCATGGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCGAGGTTCTGTGAAACACTCACTTCTCTTCCTAGGTGCCATGGGA  838

seq1  CAGTCTTGAGTGCAAAGGAGCTAAGTGTCCACAACACAGAAGCCGCCAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTGAGTGCAAAGGAGCTAAGTGTCCACAACACAGAAGCCGCCAAT  888

seq1  ACTCTGCATTAAACGTGACCCTGAGCCTGGAGTACTTTGAACTGGGTCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCATTAAACGTGACCCTGAGCCTGGAGTACTTTGAACTGGGTCTG  938

seq1  GAAGGACACCAGGGAGTTAAGTGTCATGTGTCAGCCACGGACGGGGAATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACACCAGGGAGTTAAGTGTCATGTGTCAGCCACGGACGGGGAATA  988

seq1  ATCTGGTGACTTTCCTCTTATGTCTCCTAGCTCCATGCAAAAGTCCAATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTGACTTTCCTCTTATGTCTCCTAGCTCCATGCAAAAGTCCAATG  1038

seq1  CATAGTAGGAGCTCAGTTTGATGCATAGTAGGAGCTCAGCTTGATGATGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTAGGAGCTCAGTTTGATGCATAGTAGGAGCTCAGCTTGATGATGA  1088

seq1  CCTTTTTATCGGCAGCCTGGCCAGAACTGAAAGTACCCTTGAGAAGAATT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTATCGGCAGCCTGGCCAGAACTGAAAGTACCCTTGAGAAGAATT  1138

seq1  C  1150
      |
seq2  C  1139

seq1: chr19_10251401_10252299
seq2: B6Ng01-167M18.g_68_966

seq1  GAATTCTTTTGAGCAGCATAACAAACCCAATATTTTAGAGAGTGAAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGAGCAGCATAACAAACCCAATATTTTAGAGAGTGAAGCAA  50

seq1  TGGGAATTTTGATTCATGGAGTGTCAGCCCTGGAATGTGGTGAAGTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATTTTGATTCATGGAGTGTCAGCCCTGGAATGTGGTGAAGTTTTC  100

seq1  TTGGCTTAGAACTGGGTGTGCTATCACTCCCACACTGGAAGCCGCGTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTAGAACTGGGTGTGCTATCACTCCCACACTGGAAGCCGCGTCCA  150

seq1  CAATAGCCTTGACCCTGGGATGACCTCAGCAGCAAGGGGGGGGGGCAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCCTTGACCCTGGGATGACCTCAGCAGCAAGGGGGGGGGGCAAGT  200

seq1  CTCATCCCCTCACCATCAGCTCCTAAGACTCAGCTCTTCTATTCACAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCCCTCACCATCAGCTCCTAAGACTCAGCTCTTCTATTCACAAGT  250

seq1  CAAAGGTATGATGAGCTGAAACAGTACTGAGTATGGTCGTGCCCGGCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTATGATGAGCTGAAACAGTACTGAGTATGGTCGTGCCCGGCAAC  300

seq1  CTAAGGGTTGTAACATTCTTGTAACAACAGAATCTCAAATCACATGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGTTGTAACATTCTTGTAACAACAGAATCTCAAATCACATGTGCT  350

seq1  GAACTTTCAGCCAATCGCAGTCTGCAAATTGCCCAGCGACATGTGTATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTCAGCCAATCGCAGTCTGCAAATTGCCCAGCGACATGTGTATAA  400

seq1  GACAACTACTGAGATGTTACTAATCGGCTTCTTCCTCTACATCACTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTACTGAGATGTTACTAATCGGCTTCTTCCTCTACATCACTTCCT  450

seq1  TTTCCTGCCCATAAATATCCCCAGCCCCTTTGCTTCATGGAACCTTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGCCCATAAATATCCCCAGCCCCTTTGCTTCATGGAACCTTCTTT  500

seq1  CTGAACCTTCTCTCGGCTCAGGCTACTCTCTGATTCCTAAGTCTTTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACCTTCTCTCGGCTCAGGCTACTCTCTGATTCCTAAGTCTTTTCTC  550

seq1  AGCACAAATAAAGCCTGCTAAATTTAATTAGTCTAAAGGTGTTTTCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAATAAAGCCTGCTAAATTTAATTAGTCTAAAGGTGTTTTCTTTC  600

seq1  CTTCTTATATTAACAGCTGGATGAGGGCTTAATTGTGATTTTAATTGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTATATTAACAGCTGGATGAGGGCTTAATTGTGATTTTAATTGACT  650

seq1  TCCAGAGGGTTTCAGGTCAGTTCTACTCCTAGTAAGGCTCCTGGAGTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGGGTTTCAGGTCAGTTCTACTCCTAGTAAGGCTCCTGGAGTTGT  700

seq1  GCTTGGAGCTCTCAAACTATCTCTGAACAATTTTAGCTGCAGAGAGCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAGCTCTCAAACTATCTCTGAACAATTTTAGCTGCAGAGAGCCCA  750

seq1  TGATTTGATCAGCTCTAACAATTAACTAGTCTGGATCTAGTTAAGAGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGATCAGCTCTAACAATTAACTAGTCTGGATCTAGTTAAGAGAGC  800

seq1  TCAGGTATTTTTTAAAAAACAGATACTCTTTAAATCTAGGAAGTCTGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTATTTTTTAAAAAACAGATACTCTTTAAATCTAGGAAGTCTGGGA  850

seq1  ATCTAAGAGTCTAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  899
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGAGTCTAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  899