BAC Information

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BAC

Clone NameB6Ng01-169D01
Chromosome19 (Build37)
Map Location 7,652,195 - 7,652,989
singlet/doubletsinglet
Overlap geneHrasls3
Upstream geneRps6ka4, Ccdc88, Prdx5, 0610038D11Rik, Esrra, 1700019N12Rik, Kcnk4, Gpr137, Bad, Plcb3, Ppp1r14b, Fkbp2, Vegfb, Dnajc4, Nudt22, Trpt1, BC032204, Stip1, D930010J01Rik, Flrt1, Otub1, Cox8a, Nat11, Rcor2, Mark2, AI846148, EG665419, 2700081O15Rik, Rtn3, LOC100039547, 5730596K20Rik
Downstream geneLgals12, Hrasls5, LOC433217, Slc22a19, LOC666543, BC014805, LOC632903, AB056442, LOC620946, LOC623030, 9530053H05Rik, EG434674, LOC100039705, D630002G06Rik, EG633120, EG666601, LOC100039749, C730048C13Rik, LOC100040004, LOC666612
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169D01.bB6Ng01-169D01.g
ACCDH960233DH960234
length1,160795
definitionDH960233|Mus musculus domesticus DNA, BAC clone: B6Ng01-169D01, 5' end.DH960234|Mus musculus domesticus DNA, BAC clone: B6Ng01-169D01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatcctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaagtagccagagctaaaggatctgcaaccctatag
tgacacatatgactacagtacccgagctcttgactctagctgcatattat
atcaaagatgctagtcgcatcactgaaagagagccatgactgccaacttt
atatgcctcagtacaggtacacagggcaaaaaggggaatggtggcacagg
ggaaatgggt
gaattctggggtcaagggactaaaccactatgctgggttcaaacatttta
tgttttcgaagagttcagcctattctaaaacttcaaagaagaggggtcac
atagcctctgttcttttccttccggctattgtttgttgctgtgtcaatgt
tatatttaaagactggtcctgtcctggttactggggtgctgttgctgctc
ctggcaggggaccaatctggtgatgctccctgggttcctgggtctacctc
ttgggttcatagctccttcccagccatcatacccagtacatgctcattcc
ccgtggtatgggtggttgggttaggatgccctggctctgtgctttgtcag
ctgatgctcactgccctatcctagttctacagaacccaagttcctcctct
tctagtcacttcactcttgcctcttcttacgtgtggatcttggccagggc
tgcccctgcatcccctgggtctctttagcatcatctctaggggagcagcc
tctttttttttttttttttctggaaggaagaccagcctctctcctgatgt
gatcagcctggtgaggtcaaggaattatccagatggaatcaatagttaga
aactctttccccagaaagatgagggagctctgtgcacatgtttgcagagt
taagaagtagttacaatacagaagactagcttcttcaggttaaagaagca
ttccaatagccagtggtagtggtgcatgcccatcattccagtatccaggg
gtggtggtgtgtccctgtcaccagtaggttaggggtggtggtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_7652195_7652989
seq2: B6Ng01-169D01.g_66_860

seq1  GAATTCTGGGGTCAAGGGACTAAACCACTATGCTGGGTTCAAACATTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGGTCAAGGGACTAAACCACTATGCTGGGTTCAAACATTTTA  50

seq1  TGTTTTCGAAGAGTTCAGCCTATTCTAAAACTTCAAAGAAGAGGGGTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCGAAGAGTTCAGCCTATTCTAAAACTTCAAAGAAGAGGGGTCAC  100

seq1  ATAGCCTCTGTTCTTTTCCTTCCGGCTATTGTTTGTTGCTGTGTCAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTCTGTTCTTTTCCTTCCGGCTATTGTTTGTTGCTGTGTCAATGT  150

seq1  TATATTTAAAGACTGGTCCTGTCCTGGTTACTGGGGTGCTGTTGCTGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTAAAGACTGGTCCTGTCCTGGTTACTGGGGTGCTGTTGCTGCTC  200

seq1  CTGGCAGGGGACCAATCTGGTGATGCTCCCTGGGTTCCTGGGTCTACCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGGGGACCAATCTGGTGATGCTCCCTGGGTTCCTGGGTCTACCTC  250

seq1  TTGGGTTCATAGCTCCTTCCCAGCCATCATACCCAGTACATGCTCATTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTCATAGCTCCTTCCCAGCCATCATACCCAGTACATGCTCATTCC  300

seq1  CCGTGGTATGGGTGGTTGGGTTAGGATGCCCTGGCTCTGTGCTTTGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGTATGGGTGGTTGGGTTAGGATGCCCTGGCTCTGTGCTTTGTCAG  350

seq1  CTGATGCTCACTGCCCTATCCTAGTTCTACAGAACCCAAGTTCCTCCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCTCACTGCCCTATCCTAGTTCTACAGAACCCAAGTTCCTCCTCT  400

seq1  TCTAGTCACTTCACTCTTGCCTCTTCTTACGTGTGGATCTTGGCCAGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTCACTTCACTCTTGCCTCTTCTTACGTGTGGATCTTGGCCAGGGC  450

seq1  TGCCCCTGCATCCCCTGGGTCTCTTTAGCATCATCTCTAGGGGAGCAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTGCATCCCCTGGGTCTCTTTAGCATCATCTCTAGGGGAGCAGCC  500

seq1  TCTTTTTTTTTTTTTTTTTCTGGAAGGAAGACCAGCCTCTCTCCTGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTTTTTTTTTTCTGGAAGGAAGACCAGCCTCTCTCCTGATGT  550

seq1  GATCAGCCTGGTGAGGTCAAGGAATTATCCAGATGGAATCAATAGTTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGCCTGGTGAGGTCAAGGAATTATCCAGATGGAATCAATAGTTAGA  600

seq1  AACTCTTTCCCCAGAAAGATGAGGGAGCTCTGTGCACATGTTTGCAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTTCCCCAGAAAGATGAGGGAGCTCTGTGCACATGTTTGCAGAGT  650

seq1  TAAGAAGTAGTTACAATACAGAAGACTAGCTTCTTCAGGTTAAAGAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGTAGTTACAATACAGAAGACTAGCTTCTTCAGGTTAAAGAAGCA  700

seq1  TTCCAATAGCCAGTGGTAGTGGTGCATGCCCATCATTCCAGTATCCAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATAGCCAGTGGTAGTGGTGCATGCCCATCATTCCAGTATCCAGGG  750

seq1  GTGGTGGTGTGTCCCTGTCACCCAGTA-GTTAGGGGTGGTGGTGTG  795
      |||||||||||||||||||| |||||| ||||||||||||||||||
seq2  GTGGTGGTGTGTCCCTGTCA-CCAGTAGGTTAGGGGTGGTGGTGTG  795