BAC Information

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BAC

Clone NameB6Ng01-171E12
Chromosome19 (Build37)
Map Location 32,863,476 - 32,994,345
singlet/doubletdoublet
Overlap genePten, B430203M17Rik
Upstream gene1810073H04Rik, Asah2, EG668042, Sgms1, 2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1
Downstream gene6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171E12.bB6Ng01-171E12.g
ACCGA000209GA000210
length1,1351,131
definitionB6Ng01-171E12.b B6Ng01-171E12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,863,476 - 32,864,589)(32,993,223 - 32,994,345)
sequence
gaattcccaggtcttccagtgagatctttgaagaatctactgttctcttg
taccttgctgcccactctgtaggagtgagtgtctcacaacaagggaaaga
gaaaagaaatacctgcctctgatctcagtgtttgctaactggttgacata
agggtggcacaatttccttatgaaatttttatacttcatccccctttcag
aaatttgtagctgtgtttacatataagaagccgtggtctttgtttgtttg
tttgggtgttcttggactttctagcttccaaagcttcggacagttaactt
ctgtggggcattgtgtgcatacgtggtgtttactttgtgttgactttctt
ttcaactgagttttcttttaaattgtttaaactgctttgattccttttgt
agacacagctttataatgctttataagtcctttctttatgcctttataat
atagcctttataaatcccttctgtgcccttagattcagataaatgttgac
taaagaaattgatgggttatattttgctcagaataactgattgctaactc
tgctttattgttgtatataattactatattttctattgctagctcttaaa
taatcaagaagcagctttgcttaaattatcaagtagaaaagatttaactt
atgaggaattgttaatatatctcctactactgactcggcatttttctttt
ggacagagaatagagaagtgaaaggtttagggctccctgcctttttcctg
tttccagcattatacaccagtcaagcgtatggaattctagtttctttttg
ttctgttgctccactccaacctttagttgatactgtttttgtgttccttc
ttatacaccactttgtgctgttctgatttcatctctgagcactccttctg
ccattgtgatgaccgtgttttaaaaatggagcttttgttgagcttcctct
gcagcctaagtgttttttccctgatatattttggttcatttacaaaagga
ggaattcttaggagaatcctaaccaagttccatagcattggtacctgtga
tgctgtttgagaatggtacccaaccttctaatcccagctgactcaaacct
cagtctctatagacctggccttagttttacatgtg
gaattcactaaaaagaaaatagggaaataaacctgtataattgaattgac
cacacatactcaggtcttctttatccacaatgagggaagaaaagaactgt
gccttcagtgtctgttgtaaggatggtatggctttatattagaggccatc
tattcctctgaagttgaaagcagagagagagggccattgggaatattccc
agtgaagttattaatttgtgtcattgcttggagaccacgagcaggaatca
atttgtttatgttgtctacgcttctccaagcttgttagacactctgggtt
ttagatgtgtgaatttgtcgccctccctttttccactgttggccatcact
acatcccgattccaaggccatctatattctgtttggctgatagttagcac
atctaaccacttcacagaaaaaccaacaggaggaaaccaccaagtaagag
agaaagttagcttagtccaagtcctggctgcctcacaccttgtgtttgtt
cacgaagtttgccacaaagttcccttctaacagcctcatttacaactttc
cttgagctgccaagttatcgtccagcaaagttctcctgttactttgactc
tgctacccaccgacagcctgaaacattcaacagaaaccctcagaccaagt
gctaggatgatccacaccaggcacaaatatcgatggtcacacttggcatt
tcataatagtatgggcagccaaggaattatagaggaagtaatgaatttct
atctaaatgcttggcatgttacgttcctggagcactgaacatctggaaag
tcaagaatagaaactgtaaaaggtacacggaccaaggcccctgagctacg
catcaaaaaatagtctctttactagaatattcaatagtttgttcttgaat
aaattgctggaatactgagctaaggaccatgcaaagtctgagcaaatgcc
aataatccagtgagcctcttcgcatcagaaccagacttagaattgcaaat
attagcagccatccctacatggtagaattcaggacggctattaatattct
gctgggttccttatttctgcttaagtatgtatgactttatagtagaaaaa
acataatatggaatataaaggttcttggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32863476_32864589
seq2: B6Ng01-171E12.b_35_1169

seq1  GAATTCCCAGGTCTTCCAGTGAGATCTTTGAAGAATCTACTGTTCTCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGGTCTTCCAGTGAGATCTTTGAAGAATCTACTGTTCTCTTG  50

seq1  TACCTTGCTGCCCACTCTGTAGGAGTGAGTGTCTCACAACAAGGGAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTGCTGCCCACTCTGTAGGAGTGAGTGTCTCACAACAAGGGAAAGA  100

seq1  GAAAAGAAATACCTGCCTCTGATCTCAGTGTTTGCTAACTGGTTGACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAATACCTGCCTCTGATCTCAGTGTTTGCTAACTGGTTGACATA  150

seq1  AGGGTGGCACAATTTCCTTATGAAATTTTTATACTTCATCCCCCTTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGCACAATTTCCTTATGAAATTTTTATACTTCATCCCCCTTTCAG  200

seq1  AAATTTGTAGCTGTGTTTACATATAAGAAGCCGTGGTCTTTGTTTGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTAGCTGTGTTTACATATAAGAAGCCGTGGTCTTTGTTTGTTTG  250

seq1  TTTGGGTGTTCTTGGACTTTCTAGCTTCCAAAGCTTCGGACAGTTAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTGTTCTTGGACTTTCTAGCTTCCAAAGCTTCGGACAGTTAACTT  300

seq1  CTGTGGGGCATTGTGTGCATACGTGGTGTTTACTTTGTGTTGACTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGGCATTGTGTGCATACGTGGTGTTTACTTTGTGTTGACTTTCTT  350

seq1  TTCAACTGAGTTTTCTTTTAAATTGTTTAAACTGCTTTGATTCCTTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTGAGTTTTCTTTTAAATTGTTTAAACTGCTTTGATTCCTTTTGT  400

seq1  AGACACAGCTTTATAATGCTTTATAAGTCCTTTCTTTATGCCTTTATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGCTTTATAATGCTTTATAAGTCCTTTCTTTATGCCTTTATAAT  450

seq1  ATAGCCTTTATAAATCCCTTCTGTGCCCTTAGATTCAGATAAATGTTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTTTATAAATCCCTTCTGTGCCCTTAGATTCAGATAAATGTTGAC  500

seq1  TAAAGAAATTGATGGGTTATATTTTGCTCAGAATAACTGATTGCTAACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAATTGATGGGTTATATTTTGCTCAGAATAACTGATTGCTAACTC  550

seq1  TGCTTTATTGTTGTATATAATTACTATATTTTCTATTGCTAGCTCTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTATTGTTGTATATAATTACTATATTTTCTATTGCTAGCTCTTAAA  600

seq1  TAATCAAGAAGCAGCTTTGCTTAAATTATCAAGTAGAAAAGATTTAACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAGAAGCAGCTTTGCTTAAATTATCAAGTAGAAAAGATTTAACTT  650

seq1  ATGAGGAATTGTTAATATATCTCCTACTACTGACTCGGCATTTTTCTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAATTGTTAATATATCTCCTACTACTGACTCGGCATTTTTCTTTT  700

seq1  GGACAGAGAATAGAGAAGTGAAAGGTTTAGGGCTCCCTGCCTTTTTCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAGAATAGAGAAGTGAAAGGTTTAGGGCTCCCTGCCTTTTTCCTG  750

seq1  TTTCCAGCATTATACACCAGTCAAGCGTATGGAATTCTAGTTTCTTTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGCATTATACACCAGTCAAGCGTATGGAATTCTAGTTTCTTTTTG  800

seq1  TTCTGTTGCTCCACTCCAACCTTTAGTTGATACTGTTTTTGTGTTCCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTGCTCCACTCCAACCTTTAGTTGATACTGTTTTTGTGTTCCTTC  850

seq1  TTATACACCACTTTGTGCTGTTCTGATTTCATCTCTGAGCACTCCTTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACACCACTTTGTGCTGTTCTGATTTCATCTCTGAGCACTCCTTCTG  900

seq1  CCATTGTGATGACCGTGTTTT-AAAATGGAGCTTT--GTGAGCT--CTCT  945
      ||||||||||||||||||||| |||||||||||||   ||||||  ||||
seq2  CCATTGTGATGACCGTGTTTTAAAAATGGAGCTTTTGTTGAGCTTCCTCT  950

seq1  GCAG-CTAAGTGTTTTTT-CCTGA-ATAATTT-GTTCA-TTACAAAAG--  988
      |||| ||||||||||||| ||||| ||| ||| ||||| |||||||||  
seq2  GCAGCCTAAGTGTTTTTTCCCTGATATATTTTGGTTCATTTACAAAAGGA  1000

seq1  AGAATTCT--AGAGAATCCT-ACCAAG-TCCATAGCATTGTTA-CTGTGA  1033
       |||||||   ||||||||| |||||| |||||||||||| || ||||||
seq2  GGAATTCTTAGGAGAATCCTAACCAAGTTCCATAGCATTGGTACCTGTGA  1050

seq1  TTGCTGTTTTGAG-ATGGTGTCCAAC--TCTAATCCCAGCTGACTTCAAA  1080
       ||||| |||||| |||||  |||||  |||||||||||||||||  || 
seq2  -TGCTG-TTTGAGAATGGTACCCAACCTTCTAATCCCAGCTGACTCAAAC  1098

seq1  CTCAGT-TCTATAGACCTGGC--TGTGTTTACATGTG  1114
      |||||| ||||||||||||||  |   ||||||||||
seq2  CTCAGTCTCTATAGACCTGGCCTTAGTTTTACATGTG  1135

seq1: chr19_32993223_32994345
seq2: B6Ng01-171E12.g_63_1193 (reverse)

seq1  CCCCCAAGAACTTTTATA-TCAATATTTATG-TTTTTCTACCTATAAAAG  48
      ||||||||||| |||||| || ||| ||||| |||||||| |||| ||||
seq2  CCCCCAAGAACCTTTATATTCCATA-TTATGTTTTTTCTA-CTAT-AAAG  47

seq1  TCATACATACTTACAGCAGAAAATAAGGAACACCAGCAGAATATTAATAG  98
      ||||||||||||| ||||| ||||||||||| ||||||||||||||||||
seq2  TCATACATACTTA-AGCAG-AAATAAGGAAC-CCAGCAGAATATTAATAG  94

seq1  CCGTCTTG-ATTCTACCATGTAGGGATGGCTGCT-ATATTTGCA--TCTA  144
      ||||| || ||||||||||||||||||||||||| |||||||||  ||||
seq2  CCGTCCTGAATTCTACCATGTAGGGATGGCTGCTAATATTTGCAATTCTA  144

seq1  AGTCTGGTTCTGATGCG-AGAGGCTCACTGGATTATT-GCATTTGCTCAG  192
      ||||||||||||||||| ||||||||||||||||||| ||||||||||||
seq2  AGTCTGGTTCTGATGCGAAGAGGCTCACTGGATTATTGGCATTTGCTCAG  194

seq1  ACTTTGCATGGTCCTTAGCTCAGTA-TCCAGCAA-TTATTCAAGAACAAA  240
      ||||||||||||||||||||||||| |||||||| |||||||||||||||
seq2  ACTTTGCATGGTCCTTAGCTCAGTATTCCAGCAATTTATTCAAGAACAAA  244

seq1  CTA-TGAATA-TCTAGTAAAGAGACTA-TTTTTGATGCGTAGCTCAGGGG  287
      ||| |||||| |||||||||||||||| ||||||||||||||||||||||
seq2  CTATTGAATATTCTAGTAAAGAGACTATTTTTTGATGCGTAGCTCAGGGG  294

seq1  CCTTGGTCCGTGTACCTTTTACAGTTTCTATTCTTGAC-TTCCAGATGTT  336
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCTTGGTCCGTGTACCTTTTACAGTTTCTATTCTTGACTTTCCAGATGTT  344

seq1  CAGTGCTCCAGGAACGTAACATGCCAAGCATTTAGATAGAAATTCATTAC  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTCCAGGAACGTAACATGCCAAGCATTTAGATAGAAATTCATTAC  394

seq1  TTCCTCTATAATTCCTTGGCTGCCCATACTATTATGAAATGCCAAGTGTG  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTATAATTCCTTGGCTGCCCATACTATTATGAAATGCCAAGTGTG  444

seq1  ACCATCGATATTTGTGCCTGGTGTGGATCATCCTAGCACTTGGTCTGAGG  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCGATATTTGTGCCTGGTGTGGATCATCCTAGCACTTGGTCTGAGG  494

seq1  GTTTCTGTTGAATGTTTCAGGCTGTCGGTGGGTAGCAGAGTCAAAGTAAC  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGTTGAATGTTTCAGGCTGTCGGTGGGTAGCAGAGTCAAAGTAAC  544

seq1  AGGAGAACTTTGCTGGACGATAACTTGGCAGCTCAAGGAAAGTTGTAAAT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAACTTTGCTGGACGATAACTTGGCAGCTCAAGGAAAGTTGTAAAT  594

seq1  GAGGCTGTTAGAAGGGAACTTTGTGGCAAACTTCGTGAACAAACACAAGG  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGTTAGAAGGGAACTTTGTGGCAAACTTCGTGAACAAACACAAGG  644

seq1  TGTGAGGCAGCCAGGACTTGGACTAAGCTAACTTTCTCTCTTACTTGGTG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGCAGCCAGGACTTGGACTAAGCTAACTTTCTCTCTTACTTGGTG  694

seq1  GTTTCCTCCTGTTGGTTTTTCTGTGAAGTGGTTAGATGTGCTAACTATCA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTCCTGTTGGTTTTTCTGTGAAGTGGTTAGATGTGCTAACTATCA  744

seq1  GCCAAACAGAATATAGATGGCCTTGGAATCGGGATGTAGTGATGGCCAAC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAACAGAATATAGATGGCCTTGGAATCGGGATGTAGTGATGGCCAAC  794

seq1  AGTGGAAAAAGGGAGGGCGACAAATTCACACATCTAAAACCCAGAGTGTC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAAAAGGGAGGGCGACAAATTCACACATCTAAAACCCAGAGTGTC  844

seq1  TAACAAGCTTGGAGAAGCGTAGACAACATAAACAAATTGATTCCTGCTCG  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGCTTGGAGAAGCGTAGACAACATAAACAAATTGATTCCTGCTCG  894

seq1  TGGTCTCCAAGCAATGACACAAATTAATAACTTCACTGGGAATATTCCCA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCCAAGCAATGACACAAATTAATAACTTCACTGGGAATATTCCCA  944

seq1  ATGGCCCTCTCTCTCTGCTTTCAACTTCAGAGGAATAGATGGCCTCTAAT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCCTCTCTCTCTGCTTTCAACTTCAGAGGAATAGATGGCCTCTAAT  994

seq1  ATAAAGCCATACCATCCTTACAACAGACACTGAAGGCACAGTTCTTTTCT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCCATACCATCCTTACAACAGACACTGAAGGCACAGTTCTTTTCT  1044

seq1  TCCCTCATTGTGGATAAAGAAGACCTGAGTATGTGTGGTCAATTCAATTA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCATTGTGGATAAAGAAGACCTGAGTATGTGTGGTCAATTCAATTA  1094

seq1  TACAGGTTTATTTCCCTATTTTCTTTTTAGTGAATTC  1123
      |||||||||||||||||||||||||||||||||||||
seq2  TACAGGTTTATTTCCCTATTTTCTTTTTAGTGAATTC  1131