MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-172P23
Chromosome	12 (Build37)	19 (Build37)
Map Location	21,019,653 - 21,019,857	44,385,961 - 44,386,518
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	LOC100042727, LOC673301, EG668605, LOC668614, LOC100042751, LOC100043371, EG668455, LOC100042755, LOC100043377, LOC625810, 1700030C10Rik, 3110053B16Rik, LOC668698
Downstream gene	LOC546752, EG629257, Ddef2, Itgb1bp1, Cpsf3, Iah1, Adam17, Ywhaq, LOC100043407, LOC100042796, 6030426L16Rik, LOC434693, EG668645
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042727 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC673301 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:673301
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 27 Proteins pseudo : _no_value

name	EG668605 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668605 MGI:3643307
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 30 Proteins pseudo : _no_value

name	LOC668614 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668614
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins pseudo : _no_value

name	LOC100042751 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100043371 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043371
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein

name	EG668455 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668455 MGI:3644169
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 139 ESTs, 7 Proteins

name	LOC100042755 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins pseudo : _no_value

name	LOC100043377 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043377
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC625810 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	1700030C10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69513 MGI:1916763
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs

name	3110053B16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382686 MGI:1920435
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins

name	LOC668698 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668698
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	LOC546752 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins pseudo : _no_value

name	EG629257 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629257 MGI:3643096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Ddef2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211914 MGI:2685438
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itgb1bp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16413 MGI:1306802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpsf3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54451 MGI:1859328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Iah1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67732 MGI:1914982
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11491 MGI:1096335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ywhaq (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22630 MGI:891963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043407 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043407
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs

name	LOC100042796 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042796
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins pseudo : _no_value

name	6030426L16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628850 MGI:1924364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein

name	LOC434693 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 134 ESTs, 7 Proteins

name	EG668645 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668645 MGI:3649104
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 ESTs, 13 Proteins pseudo : _no_value

name	LOC100042727 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262801 GeneID:100042727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Predicted gene, EG245297 transcript_id : XM_001478694.1

name	LOC100043371 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262883 GeneID:100043371
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : similar to development and differentiation enhancing factor 2 transcript_id : XM_001480491.1

name	EG668455 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392403 GeneID:668455 MGI:3644169
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 139 ESTs, 7 Proteins product : predicted gene, EG668455 transcript_id : XM_001004798.1

name	LOC100043377 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262885 GeneID:100043377
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to development and differentiation enhancing factor 2 transcript_id : XM_001480493.1

name	LOC668698 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262803 GeneID:668698
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : similar to development and differentiation enhancing factor 2 transcript_id : XM_001478806.1

name	EG629257 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82941416 GeneID:629257 MGI:3643096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG629257 transcript_id : XM_894112.1

name	Ddef2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52138527 GeneID:211914 MGI:2685438
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : development and differentiation enhancing factor 2 transcript_id : NM_001004364.1

name	Itgb1bp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802501 GeneID:16413 MGI:1306802
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin beta 1 binding protein 1 transcript_id : NM_008403.3

name	Cpsf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980903 GeneID:54451 MGI:1859328
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cleavage and polyadenylation specificity factor 3 transcript_id : NM_018813.2

name	Iah1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71067105 GeneID:67732 MGI:1914982
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) transcript_id : NM_026347.3

name	Adam17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347484 GeneID:11491 MGI:1096335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 17 transcript_id : NM_009615.5

name	Ywhaq (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892422 GeneID:22630 MGI:891963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide transcript_id : NM_011739.3

name	LOC100043407 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262889 GeneID:100043407
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs product : hypothetical protein LOC100043407 transcript_id : XM_001480548.1

name	LOC434693 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262894 GeneID:434693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 106 ESTs, 7 Proteins product : similar to muscle protein684, transcript variant 2 transcript_id : XM_001480560.1

name	LOC434693 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262892 GeneID:434693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 134 ESTs, 7 Proteins product : similar to muscle protein684, transcript variant 1 transcript_id : XM_001480557.1

name	LOC100042727 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262802 GeneID:100042727
definition	codon_start : 1 product : similar to Predicted gene, EG245297 protein_id : XP_001478744.1

name	LOC100043371 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262884 GeneID:100043371
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480541.1

name	EG668455 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392404 GeneID:668455 MGI:3644169
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001004798.1

name	LOC100043377 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262886 GeneID:100043377
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480543.1

name	LOC668698 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262804 GeneID:668698
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478856.1

name	EG629257 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82941417 GeneID:629257 MGI:3643096
definition	codon_start : 1 product : similar to NADH dehydrogenase protein_id : XP_899205.1

name	Ddef2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138528 GeneID:211914 MGI:2685438
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0043087 - regulation of GTPase activity [Evidence IEA] codon_start : 1 note : PYK2 C terminus-associated protein product : development and differentiation enhancing factor 2 protein_id : NP_001004364.1

name	Itgb1bp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680488 CCDS:CCDS25833.1 GeneID:16413 MGI:1306802
definition	GO_function : GO:0005178 - integrin binding [Evidence ISS]; GO:0008022 - protein C-terminus binding [Evidence ISS] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0030155 - regulation of cell adhesion [Evidence ISS] codon_start : 1 product : integrin beta 1 binding protein 1 protein_id : NP_032429.1

name	Cpsf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980904 CCDS:CCDS25834.1 GeneID:54451 MGI:1859328
definition	GO_component : GO:0005847 - mRNA cleavage and polyadenylation specificity factor complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003729 - mRNA binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006378 - mRNA polyadenylation [Evidence ISS]; GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 product : cleavage and polyadenylation specificity factor 3 protein_id : NP_061283.2

name	Iah1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754071 CCDS:CCDS25835.1 GeneID:67732 MGI:1914982
definition	GO_function : GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA] GO_process : GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 product : isoamyl acetate-hydrolyzing esterase 1 homolog protein_id : NP_080623.2

name	Adam17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347485 CCDS:CCDS25836.1 GeneID:11491 MGI:1096335
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0007219 - Notch signaling pathway [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : a disintegrin and metalloproteinase domain 17; TNF-alpha converting enzyme product : a disintegrin and metalloprotease domain 17 protein_id : NP_033745.4

name	Ywhaq (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6756039 CCDS:CCDS25837.1 GeneID:22630 MGI:891963
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0019904 - protein domain specific binding [Evidence IDA] GO_process : GO:0006605 - protein targeting [Evidence IDA]; GO:0007165 - signal transduction [Evidence TAS]; GO:0007264 - small GTPase mediated signal transduction [Evidence IPI] codon_start : 1 note : 14-3-3 theta; 14-3-3 tau product : tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein_id : NP_035869.1

name	LOC100043407 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262890 GeneID:100043407
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480598.1

name	LOC434693 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262893 GeneID:434693
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001480607.1

name	LOC434693 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262895 GeneID:434693
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001480610.1

name	LOC673301 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673301
definition	number : 1 pseudo : _no_value

name	LOC673301 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673301
definition	number : 2 pseudo : _no_value

name	LOC673301 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673301
definition	number : 3 pseudo : _no_value

name	LOC673301 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673301
definition	number : 4 pseudo : _no_value

name	LOC668614 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668614
definition	number : 1 pseudo : _no_value

name	LOC668614 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668614
definition	number : 2 pseudo : _no_value

name	LOC668614 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668614
definition	number : 3 pseudo : _no_value

name	LOC100042751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042751
definition	number : 1 pseudo : _no_value

name	LOC100042751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042751
definition	number : 2 pseudo : _no_value

name	LOC100042751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042751
definition	number : 3 pseudo : _no_value

name	LOC100042751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042751
definition	number : 4 pseudo : _no_value

name	LOC100042751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042751
definition	number : 5 pseudo : _no_value

name	LOC100042751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042751
definition	number : 6 pseudo : _no_value

name	LOC100042755 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042755
definition	number : 1 pseudo : _no_value

name	LOC100042755 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042755
definition	number : 2 pseudo : _no_value

name	LOC100042755 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042755
definition	number : 3 pseudo : _no_value

name	LOC100042755 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042755
definition	number : 4 pseudo : _no_value

name	LOC625810 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625810
definition	number : 1 pseudo : _no_value

name	LOC625810 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625810
definition	number : 2 pseudo : _no_value

name	LOC625810 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625810
definition	number : 3 pseudo : _no_value

name	3110053B16Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382686
definition	number : 3

name	3110053B16Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382686
definition	number : 2

name	3110053B16Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382686
definition	number : 1

name	LOC100042796 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042796
definition	number : 3 pseudo : _no_value

name	LOC100042796 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042796
definition	number : 2 pseudo : _no_value

name	LOC100042796 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042796
definition	number : 1 pseudo : _no_value

name	EG668605 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262882 GeneID:668605 MGI:3643307
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 30 Proteins product : predicted gene, EG668605 pseudo : _no_value transcript_id : XR_002219.2

name	1700030C10Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262887 GeneID:69513 MGI:1916763
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs product : RIKEN cDNA 1700030C10 gene transcript_id : XR_035444.1

name	LOC546752 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262888 GeneID:546752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins product : similar to neural visinin-like Ca2+-binding protein type 3 pseudo : _no_value transcript_id : XR_035702.1

name	6030426L16Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262891 GeneID:628850 MGI:1924364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : RIKEN cDNA 6030426L16 gene transcript_id : XR_035730.1

name	EG668645 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262805 GeneID:668645 MGI:3649104
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 ESTs, 13 Proteins product : predicted gene, EG668645 pseudo : _no_value transcript_id : XR_033945.1

clone name	MSMg01-061A04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-385I12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-274C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510I05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-501K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516G18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-406L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523G16
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-190G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132D18
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-172P23.b	B6Ng01-172P23.g
ACC	GA001465	GA001466
length	504	552
definition	B6Ng01-172P23.b	B6Ng01-172P23.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(21,019,653 - 21,019,857)	(44,385,961 - 44,386,518)
sequence	tgccagtacaagacagagaagcccttcgtaacttctccttcacacaaaaa tgtgtcagactattattattctgggccagtaggctgaagagacggttgcc ccaacactgcggagaaatcttggtgactgctcaggcggtcagctgtctct gtcatttctatagttttaaaaggtgcttgctctgtattttctgtttattc aggtaatatttatccttctcaggtctctgatggggttgaagactagatag ttatggtctcacagttaagcttaagttgtttaagatttaagaaaaccttt tgggctggcaagatggctcagtggttaagagcgccgactgctcttccgat ggtcctgagttcaaatcccagcaaccacatggtggctcacaaccatctgt aacaaaatctgatgccctcttctggagtatctgaggacagctacagtgta cttacatataataaataaataaatcttaaaaaagaaagaaagagagagag agag	attgtccaaaactcagtgctttctttgttgcatagaacattaagcacagg tcaccgaagagaacgcccacttcccgtgacatttgccactgagcgccact attgaagtgcagggagacatttgcaattaatggaagctgcccttagttat aatagtgctcagtcctttacaggcagccagactgtagttgcgaggagaga aaatgccagcactatttatgtggtctgagaggtgggtgtaaaactggggt gtggtaggtcacagcaagaatgggagctggatagattgtttggttccaga acacagtaagctcatgcagggagagggtgcctggattctgtggagcctga ctgcagtatcgccacaccactcctgctgcctctaaatgaactcagctacc actctgaggcgctcccatctcttgcttctgatgtgagatgagacatcctc cagcctttagcttagtgcctgaccagagaaatgatcctggcattatcact gatgtgtttataaaaagataaggaggtataggatgtgttctatgggggtg tg
quality values	Open. Hide. 47 31 62 37 20 62 62 53 56 41 59 62 59 51 59 62 62 62 49 62 62 62 62 62 62 62 62 59 51 50 48 59 59 62 62 62 62 62 62 62 59 43 59 49 62 59 62 62 62 62 59 59 54 54 62 59 59 59 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 58 58 58 58 58	Open. Hide. 43 59 62 62 62 62 36 27 50 48 48 56 59 46 28 28 32 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 59 59 62 62 62 56 54 62 62 54 54 62 62 62 59 59 62 62 59 62 62 62 62 62 62 59 62 59 59 59 59 59 59 59 51 59 59 62 62 62 62 59 62 59 62 62 59 59 56 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 49 62 62 59 59 56 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 39 56 48 48 62 62 62 62 62 59 62 62 59 51 51 56 56 43 43 54 40 56 56 40 48 34 62 62 59 59 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 51 59 59 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 56 62 59 56 62 59 62 59 62 62 59 59 59 62 62 62 62 62 62 62 56 59 59 59 51 49 62 62 62 62 62 59 59 59 56 59 51 59 59 59 56 59 62 62 59 59 62 62 59 59 62 62 62 59 59 62 59 59 59 62 62 59 59 62 62 62 62 59 62 59 62 59 56 62 51 59 59 50 56 59 45 38 39 62 62 62 62 62 62 62 59 62 59 62 62 59 56 46 46 46 56 62 56 56 56 50 56 56 47 54 62 62 62 62 56 56 56 51 56 47 44 38 38 44 51 56 37 39 44 44 51 62 47 47 47 47 50 43 31 42 26 22 21 10 31 25 56 56 56 56 62 43 56 56 56 62 62 62 62 62 62 62 62 62 47 54 62 62 47 47 56 56 62 62 62 47 62 62 46 31 40 56 56 56 41 56 50 56 56 56 62 56 56 62 56 62 56 62 41 36 43 56 56 62 54 47 62 62 62 46 39 38 38 46 42 49 62 52 42 41 62 62 62 54 52 62 62 62 62 62 62 62 62 62 62 41 54 41 49 54 54 54 54 54 43 54 32 48 47 54 54 52 58 52 41 41 47 46 52 58 28 49 58 58 44 21 41 40 40 52 46 54 13 19 19 8 21 6 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_21019653_21019857
seq2: B6Ng01-172P23.b_352_554 (reverse)

seq1  CTCTCTCTCTCTCTTTCAAAAAAAAAAAAAAGATTTATTTATTTATTATA  50
      |||||||||||||||||            |||||||||||||||||||||
seq2  CTCTCTCTCTCTCTTTC--TTTCTTTTTTAAGATTTATTTATTTATTATA  48

seq1  TGTAAGTACACTGTAGCTGTCCTCAGATACTCCAGAAGAGGGCATCAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTACACTGTAGCTGTCCTCAGATACTCCAGAAGAGGGCATCAGAT  98

seq1  TTCGTTACGGATGGTTGTGAGCCACTATGTGGTTGCCGGGATTTGAACTC  150
      || ||||| |||||||||||||||| |||||||||| |||||||||||||
seq2  TTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTC  148

seq1  AGGATCTTCGGAAGAGCAGTCTGCTCTCTTAACCACTGAGCCATCTCGCC  200
      |||| | |||||||||||||| || ||||||||||||||||||||| |||
seq2  AGGACCATCGGAAGAGCAGTCGGCGCTCTTAACCACTGAGCCATCTTGCC  198

seq1  AGCCC  205
      |||||
seq2  AGCCC  203

seq1: chr19_44385961_44386518
seq2: B6Ng01-172P23.g_65_622 (reverse)

seq1  CACACCCCCATAGAACACATCCTATACCTCCTTATCTTTTTATAAACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCCCATAGAACACATCCTATACCTCCTTATCTTTTTATAAACACA  50

seq1  TCAGTGATAATGCCAGGATCATTTCTCTGGTCAGGCACTAAGCTAAAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGATAATGCCAGGATCATTTCTCTGGTCAGGCACTAAGCTAAAGGC  100

seq1  TGGAGGATGTCTCATCTCACATCAGAAGCAAGAGATGGGAGCGCCTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGATGTCTCATCTCACATCAGAAGCAAGAGATGGGAGCGCCTCAGA  150

seq1  GTGGTAGCTGAGTTCATTTAGAGGCAGCAGGAGTGGTGTGGCGATACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAGCTGAGTTCATTTAGAGGCAGCAGGAGTGGTGTGGCGATACTGC  200

seq1  AGTCAGGCTCCACAGAATCCAGGCACCCTCTCCCTGCATGAGCTTACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGCTCCACAGAATCCAGGCACCCTCTCCCTGCATGAGCTTACTGT  250

seq1  GTTCTGGAACCAAACAATCTATCCAGCTCCCATTCTTGCTGTGACCTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGAACCAAACAATCTATCCAGCTCCCATTCTTGCTGTGACCTACC  300

seq1  ACACCCCAGTTTTACACCCACCTCTCAGACCACATAAATAGTGCTGGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCCAGTTTTACACCCACCTCTCAGACCACATAAATAGTGCTGGCAT  350

seq1  TTTCTCTCCTCGCAACTACAGTCTGGCTGCCTGTAAAGGACTGAGCACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCCTCGCAACTACAGTCTGGCTGCCTGTAAAGGACTGAGCACTA  400

seq1  TTATAACTAAGGGCAGCTTCCATTAATTGCAAATGTCTCCCTGCACTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAACTAAGGGCAGCTTCCATTAATTGCAAATGTCTCCCTGCACTTCA  450

seq1  ATAGTGGCGCTCAGTGGCAAATGTCACGGGAAGTGGGCGTTCTCTTCGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGCGCTCAGTGGCAAATGTCACGGGAAGTGGGCGTTCTCTTCGGT  500

seq1  GACCTGTGCTTAATGTTCTATGCAACAAAGAAAGCACTGAGTTTTGGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTGCTTAATGTTCTATGCAACAAAGAAAGCACTGAGTTTTGGACA  550

seq1  ATGAATTC  558
      ||||||||
seq2  ATGAATTC  558

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information