BAC Information

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BAC

Clone NameB6Ng01-174G04
Chromosome19 (Build37)
Map Location 34,855,459 - 34,976,837
singlet/doubletdoublet
Overlap genePank1
Upstream geneEG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas, Ch25h, Lipa, Ifit2, Ifit3, OTTMUSG00000016644, LOC667370, 2010002M12Rik, Ifit1, Slc16a12, LOC676714
Downstream geneMphosph1, LOC383464, LOC100042292, A830019P07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174G04.bB6Ng01-174G04.g
ACCGA002480GA002481
length841289
definitionB6Ng01-174G04.b B6Ng01-174G04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,855,459 - 34,856,298)(34,976,549 - 34,976,837)
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
gagtccaccttcttgagttctttatatatattggatattagtcccctatc
caatttgggataggtaaagatcctttcccaatctgttggtggcctttttg
tcttattgacggtgtcttttgctttgcagaagctttgcaattttatgagg
tcccatttatcgattcttgatcttacagcacaagccattgctgttctatt
caggaatttttcccctgtacccatatcttcgaggctttccctattttctc
ctctataagtttcagtgtctctggttttatgtggagttccttaatccact
tagatttgaccttagtacaaagagatagaaatggatcaattcgcattctt
ctacatgataaccgccagttgtgccagcaccatttgttgaaaatgctgtc
ttttttccactggatgtttatgtttttaactttattagtttctaggtctg
gtgtgggtgctcacaacccacatgtggacattagaagggaaatttgggga
gttagttttggctttgcaccttatgtgagattggatctctctcgtgtctg
cctttgtgctgtgtgcagagccaagctgtaagctttaagtcattctcctg
tcctcacatctcatccctctgtaggagcactgggattgtgggtgcactga
aattaggcttttccctctcataatgtgaggtccatggatctgaacccaca
ttgttaggctttcttagcactttcattttccgagccatattcctgggcca
gaaaaaaaatgtgattattttttatgattcagatctgtgca
taaaatgatttcagattccaaaaccccgactcaaccacactgaacaacaa
atagactcctcttgaataaagccactgaggtgttggaattattaagagct
tgggctgctgcgatgagtcacctgaacccacatggtaaaaggagaaatcc
aacatccgcaggttgtctactgacttccacatttgtacccagacacatgc
acgcacgcacgcacacacacataaagataaataaataaaatttaataata
gaatgtaatgtgtgctttgggttgtgggggtggagtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_34855459_34856298
seq2: B6Ng01-174G04.b_37_877

seq1  GAATTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  GAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCCTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCCTATC  100

seq1  CAATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTTTTG  150

seq1  TCTTATTGACGGTGTCTTTTGCTTTGCAGAAGCTTTGCAATTTTATGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTGACGGTGTCTTTTGCTTTGCAGAAGCTTTGCAATTTTATGAGG  200

seq1  TCCCATTTATCGATTCTTGATCTTACAGCACAAGCCATTGCTGTTCTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTATCGATTCTTGATCTTACAGCACAAGCCATTGCTGTTCTATT  250

seq1  CAGGAATTTTTCCCCTGTACCCATATCTTCGAGGCTTTCCCTATTTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATTTTTCCCCTGTACCCATATCTTCGAGGCTTTCCCTATTTTCTC  300

seq1  CTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAATCCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAATCCACT  350

seq1  TAGATTTGACCTTAGTACAAAGAGATAGAAATGGATCAATTCGCATTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTGACCTTAGTACAAAGAGATAGAAATGGATCAATTCGCATTCTT  400

seq1  CTACATGATAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGATAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTC  450

seq1  TTTTTTCCACTGGATGTTTATGTTTTTAACTTTATTAGTTTCTAGGTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCACTGGATGTTTATGTTTTTAACTTTATTAGTTTCTAGGTCTG  500

seq1  GTGTGGGTGCTCACAACCCACATGTGGACATTAGAAGGGAAATTTGGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGTGCTCACAACCCACATGTGGACATTAGAAGGGAAATTTGGGGA  550

seq1  GTTAGTTTTGGCTTTGCACCTTATGTGAGATTGGATCTCTCTCGTGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTTTTGGCTTTGCACCTTATGTGAGATTGGATCTCTCTCGTGTCTG  600

seq1  CCTTTGTGCTGTGTGCAGAGCCAAGCTGTAAGCTTTAAGTCATTCTCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTGCTGTGTGCAGAGCCAAGCTGTAAGCTTTAAGTCATTCTCCTG  650

seq1  TCCTCACATCTCATCCCTCTGTAGGAGCACTGGGATTGTGGGTGCACTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACATCTCATCCCTCTGTAGGAGCACTGGGATTGTGGGTGCACTGA  700

seq1  AATTAGGCTTTTCCCTCTCATAATGTGAGGTCCATGGATCTGAACCCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGCTTTTCCCTCTCATAATGTGAGGTCCATGGATCTGAACCCACA  750

seq1  TTGTTAGGCTTTCTTAGCACTTTCATTTTCCGAGCCATATTCCTGGGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGGCTTTCTTAGCACTTTCATTTTCCGAGCCATATTCCTGGGCCA  800

seq1  GAAAAAAAATGTGATTA-TTTTTATGATACAGATCTGTGCA  840
      ||||||||||||||||| |||||||||| ||||||||||||
seq2  GAAAAAAAATGTGATTATTTTTTATGATTCAGATCTGTGCA  841

seq1: chr19_34976549_34976837
seq2: B6Ng01-174G04.g_75_363 (reverse)

seq1  AAAACTCCACCCCCACAACCCAAAGCACACATTACATTCTATTATTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCCACCCCCACAACCCAAAGCACACATTACATTCTATTATTAAAT  50

seq1  TTTATTTATTTATCTTTATGTGTGTGTGCGTGCGTGCGTGCATGTGTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTATCTTTATGTGTGTGTGCGTGCGTGCGTGCATGTGTCTG  100

seq1  GGTACAAATGTGGAAGTCAGTAGACAACCTGCGGATGTTGGATTTCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAAATGTGGAAGTCAGTAGACAACCTGCGGATGTTGGATTTCTCCT  150

seq1  TTTACCATGTGGGTTCAGGTGACTCATCGCAGCAGCCCAAGCTCTTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCATGTGGGTTCAGGTGACTCATCGCAGCAGCCCAAGCTCTTAATA  200

seq1  ATTCCAACACCTCAGTGGCTTTATTCAAGAGGAGTCTATTTGTTGTTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAACACCTCAGTGGCTTTATTCAAGAGGAGTCTATTTGTTGTTCAG  250

seq1  TGTGGTTGAGTCGGGGTTTTGGAATCTGAAATCATTTTA  289
      |||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTGAGTCGGGGTTTTGGAATCTGAAATCATTTTA  289