BAC Information

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BAC

Clone NameB6Ng01-174P19
Chromosome19 (Build37)
Map Location 41,436,680 - 41,437,273
singlet/doubletsinglet
Overlap genePik3ap1
Upstream geneSorbs1, Aldh18a1, LOC100043135, 4930521E07Rik, EG667723, Entpd1, EG667720, EG668310, EG668311, Ccnj, LOC664819, E030044B06Rik, E130314M14Rik, Zfp518, Blnk, LOC100043155, Dntt, Tmem10, Tll2, Tm9sf3
Downstream geneLOC100043167, EG627352, Lcor, AI606181, Slit1, Arhgap19, Frat1, Frat2, Rrp12, LOC100042609, Pgam1, Exosc1, Zdhhc16, Mms19l, Ubtd1, Ankrd2, 0610010D20Rik, 4933411K16Rik, BC023055, Pi4k2a, Avpi1, Marveld1, EG628994, LOC100042633, Zfyve27, Sfrp5, 4933417O08Rik, Crtac1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174P19.bB6Ng01-174P19.g
ACCGA002913GA002914
length590926
definitionB6Ng01-174P19.b B6Ng01-174P19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ccagcatccaggaggctgatgcaggaggattgagaatttgagatcagctt
gggtcttatggtgagtagtggaccagcctgagatatataatgagaccctc
tcacaaaaagccaagagatgaacaaaaaataatacatttgaaaatttttg
atttgggctggggatagggagatggcctagagggtgaagaagttgcttgc
ttgctggtgggagggggcagacactgaaaattgtcttctgatatctgtac
gtatgtgacatacatgcatgtacatacacacacacacacacacacacaca
cacacacacacacacacacgagagagagagagagagagggagagagagag
agagagagagagagagagagagagaatttgatcagaactttcatttctta
aagtaaaccaaaatcccaagactaacctggtcttagttgtgtaaagccac
atcaagactgaatcaactcttttttgtatctcaggccgaggggcttggat
acatctttctgaaattttttctgatacaatttttatgctagaatcatatg
gttttccttagatcgtatttacttttttggaaaagctgtt
gaattctgaaaggaatctagaacttagggctgaaaagcctttgagtgagc
gttcagggctttaatggtctgttgtgggaacttgaaatactgctgagaaa
agtacggacaattgagacctggcttaggacgtttcagaggaagttttgag
aatccctcaaatactctattgggctttttctgtggttactttgaattaag
aatctgtggtttctggtcaactggtgcttaagaatcaactgtgattaaca
agagaccacaccactgaagtgacacctttgctttactgaacaactgatgc
tggttaattaagaagggaccagcataactaaagtgaagtcatctgggagt
ctgtccttggtgtcagcacaaatggttatggtccagagaggccaaagctg
catctcagggcatctctagctggcagttaaagaagttggtaacatgactc
tcccggacagtgctcgtcctggtggcatggaagctcaggattggagaggt
cacggagagaagtggaagcctggcacagtgaaggccagaggaggccttag
tgacagagcagccatagcgtaagcagtcctgtgcaggagagccactttgg
agcctaaaagctgtgtgttctgtgggtggcagagcccgagaagtggggct
acccaagcactcaggagcccagaaggtttgtgagtgaaccacagtctgtc
gacgctgagcggtttgtactgttgagagtctggttttggtttgaattgat
tgtgattgtaccctggctcttctctcttcgagtaagaaaataactttttg
atttaagaagagtataacagttgacattttggactttttaaagaattctt
agatggtttaaagtgtttgaaaaatttaaaaactataaggaatttttatg
ttaagttaagttttatatcgtgtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_41436680_41437273
seq2: B6Ng01-174P19.b_46_641 (reverse)

seq1  AACAGCTTTTCC-AAAAAGTAAATACGATCTAAGGAAAACCATATGATTC  49
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AACAGCTTTTCCAAAAAAGTAAATACGATCTAAGGAAAACCATATGATTC  50

seq1  TAGCAT-AAAATTGTATCAGAAAAAATTTCAGAAAGATGTATCCAAGCCC  98
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATAAAAATTGTATCAGAAAAAATTTCAGAAAGATGTATCCAAGCCC  100

seq1  CTCTGCCTGAGATACAAAAAAGAGTTGATTCAGTCTTGATGTGGCTTTAC  148
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGCCTGAGATACAAAAAAGAGTTGATTCAGTCTTGATGTGGCTTTAC  150

seq1  ACAACTAAGACCAGGTTAGTCTTGGGTTTTTGGTTTACTTTAAGAAATGA  198
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACAACTAAGACCAGGTTAGTCTTGGGATTTTGGTTTACTTTAAGAAATGA  200

seq1  AAGTTCTGATCAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGATCAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  250

seq1  CCCTCTCTCTCTCTCTCTCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCTCTCTCTCTCTCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  300

seq1  TGTGTGTGTGTGTGTATGTACATGCATGTATGTCACATACGTACAGATAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTATGTACATGCATGTATGTCACATACGTACAGATAT  350

seq1  CAGAAGACAATTTTCAGTGTCTGCCCCCTCCCACCAGCAAGCAAGCAACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACAATTTTCAGTGTCTGCCCCCTCCCACCAGCAAGCAAGCAACT  400

seq1  TCTTCACCCTCTAGGCCATCTCCCTATCCCCAGCCCAAATCAAAAATTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACCCTCTAGGCCATCTCCCTATCCCCAGCCCAAATCAAAAATTTT  450

seq1  CAAATGTATTATTTTTTGTTCATCTCTTGGCTTTTTGTGAGAGGGTCTCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTATTATTTTTTGTTCATCTCTTGGCTTTTTGTGAGAGGGTCTCA  500

seq1  TTATATATCTCAGGCTGGTCCACTACTCACCATAAGACCCAAGCTGATCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATCTCAGGCTGGTCCACTACTCACCATAAGACCCAAGCTGATCT  550

seq1  CAAATTCTCAATCCTCCTGCATCAGCCTCCTGGATGCTGGGAATTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCTCAATCCTCCTGCATCAGCCTCCTGGATGCTGGGAATTC  596