BAC Information

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BAC

Clone NameB6Ng01-176N02
Chromosome19 (Build37)
Map Location 33,718,295 - 33,718,556
singlet/doubletsinglet
Overlap genenone
Upstream genePapss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699, EG668106
Downstream geneEG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas, Ch25h, Lipa, Ifit2, Ifit3, OTTMUSG00000016644, LOC667370, 2010002M12Rik, Ifit1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176N02.bB6Ng01-176N02.g
ACCGA004253GA004254
length913976
definitionB6Ng01-176N02.b B6Ng01-176N02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgaatgttttgagttaggatgtttttgcattttgcatcttcct
tgattcttttgcccatgttctctatggagtcttctgtacctgagattctc
tcttccatctcttgtattctgttgctgatcctcaaatctatggttcatga
tttctttccttgggtttctatctccagagttgtctcacgtgtgggtttct
ttattgtttctacttccctttttaagtcttggatggttttgttcaattcc
atgtcctgtttgattgtgatttcctataattctttaaggacttgtaatta
tttaatagtgttctcctgtatttctttaagtgaattgtgaatgcccttat
ctttaatcaggataatgagatatgattttgtatccgagtcttgattttca
gatgtgttggggtatccaggactggctgaggtgggagtgctgggttctga
tgatggtgagtgatctggtttctgttagtaagatgcttacatttgccttt
ggccatctggtaatctctggcattagtttttagaattgtctctggttgga
gcttgttcctcctgtgattctgttagcctctgtcagcagtcctgggagcc
cagttctcccctgagtctcagtggtcagtgtattctctgctggcaagctc
tcttcttggagggaatgtgcacagaggtctggcattcagacctgccttct
ggatgaagatgaatgcctgaaacagggcctgtatcagaagatgtgttgcc
caaattagtctgccagcttacctgcacagattgtactctgtgagaccagg
gacacatgatggctccctcacctgctctgacagtcagtgccctcccttgt
tcagacagctctcctcctgtggggaaaggttaccagatgttctttgagcc
tgaaatgggatct
gaattcccttggcagaaccccttgtcccttggcagaaccccttagttatg
caaacttgtactttccctgccccgctctccccccttgagtttttcctata
taagcctgtgaaaaatttggctcgaggtcaattctcctctacaccatact
aggtgtatgagtttcgaccccagagctctggtctaatgtgctttcttgct
gttgctttattaaatcttgccctcaacattttgagttcggtctcagtgtc
ttcttgggtccgcggctgtcccgaggcttgagtgagggtctcccttcggg
gggtctttcatttgggggctcgtccgggatcagggcgaccacccagaggt
cctagacccacttaaaggtaagattctttgacctgtcttggtctggtgtc
tgtgttctgtttctaagtttggtgcgatcgcagtttcggttttgcggacg
ctcagtgagaccgcgctccgagagggaacgcggggtggataaggatagac
gtgtccaggtgtccaccatccgttcgccctgggagacatcccaggaggaa
caggggaggaccagggacgcctggtggacccctttggaggccaagagacc
atctggggttgcgagatcgtgggttcgagtcccacctcgtgccttgttgc
gagaccgtgggttcgagccccacctcgtgttttgttgcgagatcgtgggt
tcgagtcccacctcgcgccttgatgcgagaccgtgggttcaagtcccacc
tcgtgttttgttacgggatcgtgggttcgagtcccacctcgtgcagaggg
tctcaatcggccggccttagaaaggctatctgattctttgagttgcttgt
ggtagacgcgaagtcgccgccatttttggtttcttttttgtcttagtctt
gtgttcgctcttgttgtgtctactattattctagaaatgggacaatctgt
gtccactccctttctctaactctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33718295_33718556
seq2: B6Ng01-176N02.b_105_306 (reverse)

seq1  AAACAGGAAAACACAATCAAACAGGTAGAAGTCCTTACAGAAAAAGAGGA  50
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAACATACAAACAGGTGATGGAAATGAACAAAACCATACTAGACCTAA  100
                |||||||  |||||| ||||||||||||| | |||| |||
seq2  ----------AAACAGGACATGGAATTGAACAAAACCATCCAAGACTTAA  40

seq1  AAAGGGAAGTAGACACAATAAAGAAAACTCAAAGTGAGACAACACTGGAG  150
      ||||||||||||| |||||||||||| |   | |||||||||| ||||||
seq2  AAAGGGAAGTAGAAACAATAAAGAAACCCACACGTGAGACAACTCTGGAG  90

seq1  ATAGAAACCCTAGGAAAGAAATCTGGAACCATAGATTTGAGCATCAGCAA  200
      |||||||||| ||||||||||||  |||||||||||||||| ||||||||
seq2  ATAGAAACCCAAGGAAAGAAATCATGAACCATAGATTTGAGGATCAGCAA  140

seq1  CAGAATACAAGAGATGGAAGAGAGAATCTCAGGTGCAGAAGATTCCATAG  250
      |||||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  CAGAATACAAGAGATGGAAGAGAGAATCTCAGGTACAGAAGACTCCATAG  190

seq1  AGAACATCGGCA  262
      ||||||| ||||
seq2  AGAACATGGGCA  202