BAC Information

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BAC

Clone NameB6Ng01-178A22
Chromosome19 (Build37)
Map Location 31,183,319 - 31,184,477
singlet/doubletsinglet
Overlap genePrkg1
Upstream geneGldc, EG625917, Mbl2, LOC100042088, LOC668020, EG546723, Dkk1, LOC625995, Cstf2t
Downstream gene8430431K14Rik, 1810073H04Rik, Asah2, EG668042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178A22.bB6Ng01-178A22.g
ACCGA005157GA005158
length1,1351,192
definitionB6Ng01-178A22.b B6Ng01-178A22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatattcttacagtcatcagaaagaggttcttaggaaaaaaacc
cacttcaaatttatccaaatttatcccaaatcagtgaactttaaatcctt
gtacagaaaacagaaatcaagggcacttgccagtgatagggcacttgcca
gaaaatatttgacttaggttacaagtaaataactactagcctttgatctt
aacttagtaaatacgtccaagtagcgtatgctgttgctcatctctggtct
agatgctgcagaatccaggacttggaacggctaaagcaccgtctcaggca
aactaagacagaatgttattttagacttaatggtgtttaggttttttccc
tttgctagattatgtcttggcttgagaaaatctgcttttttttttttttt
taaataacattttacttgttgcttacagagtcggtctttttcaacaggaa
aaggatatgacacagtaactcctatccactcactcctgctgtcagtaaaa
atgccctactgtaccgacttatacacatatttcagtcatttcccagatat
tttagagtaccatggccttgctagaacagagaccctttaaggttctttta
ttatttccgggcagtgtaatgattcacgcactgtctcgtacgtagcaaga
ttgaaagagttgctggtaattttcttctcactataaaccattctgccctc
ttctccagaagcagaaatgtttccattttcagcagtgtgtgcttcagaca
gatagataaacacacacacacacacacacacacactggactaaactgaag
actatacatattaacttaaaatctgaccattttaatctctgcacttccct
ctttaatcctctttcttctacattaacatttatgaaattagggtatatct
tagaatctacatgagaaagaaccttgctagactctaggtagaaaagtttc
aataacattattattggccaattgccaactagagaaattatgttcagcga
tgtagactatacctgctcttcaaactctcacctcagttattactgccatt
gtagtaaatccactacatattgatcctatcttttaatgtcctaggagata
catagcctagcagattgaatgtagttatttcttat
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcataacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtatgaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtcgacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccaggtatccaccccataatc
agcatccaaacgctgacaccattgcataccctagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagaacccaagagctaaagggatctgcaacccta
taggtggacacattatgactaaccagtaccccggatctcttgactctagc
tgcatatgttaacaaagatggcctaatcggcatccactggaaaggagagg
cccatgacacgtaactttgtattgcctcagtacaggtacgtcctaagtca
aatggggaacggggtgtgtcttagggacactcccactaacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_31183319_31184477
seq2: B6Ng01-178A22.b_33_1167

seq1  GAATTCCATATTCTTACAGTCATCAGAAAGAGGTTCTTAGGAAAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATTCTTACAGTCATCAGAAAGAGGTTCTTAGGAAAAAAACC  50

seq1  CACTTCAAATTTATCCAAATTTATCCCAAATCAGTGAACTTTAAATCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAAATTTATCCAAATTTATCCCAAATCAGTGAACTTTAAATCCTT  100

seq1  GTACAGAAAACAGAAATCAAGGGCACTTGCCAGTGATAGGGCACTTGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGAAAACAGAAATCAAGGGCACTTGCCAGTGATAGGGCACTTGCCA  150

seq1  GAAAATATTTGACTTAGGTTACAAGTAAATAACTACTAGCCTTTGATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATTTGACTTAGGTTACAAGTAAATAACTACTAGCCTTTGATCTT  200

seq1  AACTTAGTAAATACGTCCAAGTAGCGTATGCTGTTGCTCATCTCTGGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGTAAATACGTCCAAGTAGCGTATGCTGTTGCTCATCTCTGGTCT  250

seq1  AGATGCTGCAGAATCCAGGACTTGGAACGGCTAAAGCACCGTCTCAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGCAGAATCCAGGACTTGGAACGGCTAAAGCACCGTCTCAGGCA  300

seq1  AACTAAGACAGAATGTTATTTTAGACTTAATGGTGTTTAGGTTTTTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGACAGAATGTTATTTTAGACTTAATGGTGTTTAGGTTTTTTCCC  350

seq1  TTTGCTAGATTATGTCTTGGCTTGAGAAAATCTGCTTTTTTTTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAGATTATGTCTTGGCTTGAGAAAATCTGCTTTTTTTTTTTTTTT  400

seq1  TAAATAACATTTTACTTGTTGCTTACAGAGTCGGTCTTTTTCAACAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAACATTTTACTTGTTGCTTACAGAGTCGGTCTTTTTCAACAGGAA  450

seq1  AAGGATATGACACAGTAACTCCTATCCACTCACTCCTGCTGTCAGTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATATGACACAGTAACTCCTATCCACTCACTCCTGCTGTCAGTAAAA  500

seq1  ATGCCCTACTGTACCGACTTATACACATATTTCAGTCATTTCCCAGATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTACTGTACCGACTTATACACATATTTCAGTCATTTCCCAGATAT  550

seq1  TTTAGAGTACCATGGCCTTGCTAGAACAGAGACCCTTTAAGGTTCTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGTACCATGGCCTTGCTAGAACAGAGACCCTTTAAGGTTCTTTTA  600

seq1  TTATTTCCGGGCAGTGTAATGATTCACGCACTGTCTCGTACGTAGCAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCGGGCAGTGTAATGATTCACGCACTGTCTCGTACGTAGCAAGA  650

seq1  TTGAAAGAGTTGCTGGTAATTTTCTTCTCACTATAAACCATTCTGCCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGAGTTGCTGGTAATTTTCTTCTCACTATAAACCATTCTGCCCTC  700

seq1  TTCTCCAGAAGCAGAAATGTTTCCATTTTCAGCAGTGTGTGCTTCAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGAAGCAGAAATGTTTCCATTTTCAGCAGTGTGTGCTTCAGACA  750

seq1  GATAGATAAACACACACACACACACACACACACACTGGACTAAACTGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATAAACACACACACACACACACACACACACTGGACTAAACTGAAG  800

seq1  ACTATACATATTAACTTAAAATCTGACCATTTTAATCTCTGCACTTCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACATATTAACTTAAAATCTGACCATTTTAATCTCTGCACTTCCCT  850

seq1  CTTTAATCCTCTTTCTTCTACATTAACATTTATGAAATTAGGGTATATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCCTCTTTCTTCTACATTAACATTTATGAAATTAGGGTATATCT  900

seq1  TAGAATCTACATGAGAAAGAACCTTGCTAGACTCTAGGTAGAAAAGTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCTACATGAGAAAGAACCTTGCTAGACTCTAGGTAGAAAAGTTTC  950

seq1  AATAACATTATTATTGGCCAATTGGCCAACTAGAGAAATTATGTTTCAGC  1000
      ||||||||||||||||||||||| ||||||||||||||||||| ||||||
seq2  AATAACATTATTATTGGCCAATT-GCCAACTAGAGAAATTATG-TTCAGC  998

seq1  GATGTTAGACTATACCTGCTCTTCCAAACTCTCACCTCAGTTTAATTACT  1050
      |||| |||||||||||||||||| ||||||||||||||||||  ||||||
seq2  GATG-TAGACTATACCTGCTCTT-CAAACTCTCACCTCAGTT--ATTACT  1044

seq1  GCCATTGTAAGTTAAAATTCAACTTACATATTTGAATTCTTAATCTTTTA  1100
      |||||||| |||  |||| ||   ||||||||   || ||  ||||||| 
seq2  GCCATTGT-AGT--AAATCCA--CTACATATT--GATCCT--ATCTTTT-  1084

seq1  AAATGTCCTTAGGAGGATTACATAGCCTAGCAGTTTTGAAATGTAAAGTT  1150
       ||||||| ||||||   ||||||||||||||| ||   |||||  ||||
seq2  -AATGTCC-TAGGAG--ATACATAGCCTAGCAGATT--GAATGT--AGTT  1126

seq1  ATTTCTTAT  1159
      |||||||||
seq2  ATTTCTTAT  1135