BAC Information

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BAC

Clone NameB6Ng01-180D12
Chromosome19 (Build37)
Map Location 31,958,731 - 32,086,640
singlet/doubletdoublet
Overlap gene1810073H04Rik, Asah2
Upstream genePrkg1, LOC625995, Cstf2t, 8430431K14Rik
Downstream geneEG668042, Sgms1, 2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180D12.bB6Ng01-180D12.g
ACCGA006717GA006718
length1,1531,130
definitionB6Ng01-180D12.b B6Ng01-180D12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,085,486 - 32,086,640)(31,958,731 - 31,959,861)
sequence
gaattctctgctgatctcttggtagcctcctgtactatgtttggcaacac
tgacaaataatgtttccttatttggtggaacctctgtagaagaaatctgc
ctatgcttgtgacctgtaaaagagatgagggaaaacatgaaaagttcaca
agcctggcattccaaaggaaaaggggtccagtggattaaggaagtatgca
gacttgaaatgatattaaaacacttaagcatcagtttagatagtaaaaag
acagaagaatattttacgcctgtatcttttacagtctttcctatccccac
aagggaaatttgttgaactagcccttgaatatttttcttctttcaagaat
tcatcaaattcttacattctgcccaacacatcctatcattcccatcactg
ccatcattcacacagattatttcactacctttcaatttgggttcctccat
ggctcctctgtagtcctttttcaacaggacacccaactccattcctttac
agtggtggctctcagccttcctaatgctgtgaccctttaacctaggtcct
catgttgtgatctttcctactttattactgtgattttgctacttttatga
atcacaatttaaatattgccaaaatttgaatatgtgccaaaggggttgtg
acccacgcgttgagaacctctgcttcaaaccatgaactaaacatgctact
tctctgtcccagatcacccagccctttcccatcttcttccaggcactcac
ccacttccttccactttctttacaggtccacgcagactgtatctcagcaa
gttccctgctgtgatttcttttggctttccttctttttcaccctgcttca
gccatcctgcatcactgttaaggttttcttgtatagagagaaatgtacct
gctaagaacatgcaccactaagcatgttctagacttggagattttgaact
tatggttctttctgtagaaaacacattctcttcagctagcctcaaggcca
agtctttgaattttttttaaatcctttgcttaaatctctaatggagatgc
taatactattcaatactacataaaagcatcgttactacagcaacagctgt
cttctccgcacatcagcacagcacagtatcggcaccaaccctatgcatca
ctc
gaattccaggacagtctgctcttcagagtgagttccaggactgccagggc
tacatggatgaacactatctcaaaagaaccaaaataattaattttatgat
gatgatgatgatgataatggtgatgttactattgctattattgtggttta
catgtgacaataatattgtaaaaatattattatcacatataaatgacaag
tttttaagttatctttattcctttcgacccactctgccctttgtttatct
gtccactgatagatgagtctctccattaatgatttaagcatggggggttt
tttgttgttgttgctgtttgcattttacagatatcattcttatctactat
ttatctgccaaccatttattgtagtcgctgccagagtgacattacaatta
tgtgtgcttgtgatttttatgtagttaaatctggcagtcctttccatgtg
ggattttacacttactttgaaagactccatgccacagagtatgagtttgt
tcttctgggttctggtagttacataatgcttataaaggttatctctttaa
tcctcttagaagttggacataggttattaggtgatagtccaaatttatct
ctttctcaaattgtccctgaccccccccctcccgtgatctgaaataacac
cttttggcaaacaccaatctcaaaacaactacaaatgaaggctttagatt
ccgtgacgtggatttttctgttattggggagtgtttaattccttactgtt
gggtaagctggctcagatcattccatgtgtttaataaatcctgtggcaac
catcacatgtattttaaccgccagaagaattatgaggttaatttctcagt
ttaaataatagaatctaaatatgacagatgtggaagaacagatttcctga
cataatacacttttcacttaaactgttctttagggttttctgctaaactt
tatcattttcttcacatgatttcggcacttcttatgtttattacccccca
ttattggtcagatttttcttctgggttcttgtttgtctcttagcaagcat
tcattctaccctcgagtgcttctcttgactagctgcactacagtgttatt
gaactgactggcctttaatctggaataata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32085486_32086640
seq2: B6Ng01-180D12.b_48_1200 (reverse)

seq1  GAGTGATGGCATTAGTGTTGGTGCCGATACTGGTGCTGGTGCTGATGTGC  50
      ||||||| ||| ||| ||||||||||||||| ||||| ||||||||||||
seq2  GAGTGAT-GCA-TAGGGTTGGTGCCGATACT-GTGCT-GTGCTGATGTGC  46

seq1  -GAG-AGACAGCTGGTTGCTGTTAGTAACGATGCTTTTATGTAGTA-TGA  97
       ||| |||||||| ||||||| |||||||||||||||||||||||| |||
seq2  GGAGAAGACAGCT-GTTGCTG-TAGTAACGATGCTTTTATGTAGTATTGA  94

seq1  ATAGTATTAGCATCTCCATTAGAGATTTAAGCAAAGGATTT-AAAAAAAT  146
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATAGTATTAGCATCTCCATTAGAGATTTAAGCAAAGGATTTAAAAAAAAT  144

seq1  TCAAAGACTTGGCCTTGAGGCTAGCTGAAGAGAATGTGTTTTCTACAGAA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGACTTGGCCTTGAGGCTAGCTGAAGAGAATGTGTTTTCTACAGAA  194

seq1  AGAACCATAAGTTCAAAATCTCCAAGTCTAGAACATGCTTAGTGGTGCAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCATAAGTTCAAAATCTCCAAGTCTAGAACATGCTTAGTGGTGCAT  244

seq1  GTTCTTAGCAGGTACATTTCTCTCTATACAAGAAAACCTTAACAGTGATG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTAGCAGGTACATTTCTCTCTATACAAGAAAACCTTAACAGTGATG  294

seq1  CAGGATGGCTGAAGCAGGGTGAAAAAGAAGGAAAGCCAAAAGAAATCACA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGGCTGAAGCAGGGTGAAAAAGAAGGAAAGCCAAAAGAAATCACA  344

seq1  GCAGGGAACTTGCTGAGATACAGTCTGCGTGGACCTGTAAAGAAAGTGGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGAACTTGCTGAGATACAGTCTGCGTGGACCTGTAAAGAAAGTGGA  394

seq1  AGGAAGTGGGTGAGTGCCTGGAAGAAGATGGGAAAGGGCTGGGTGATCTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTGGGTGAGTGCCTGGAAGAAGATGGGAAAGGGCTGGGTGATCTG  444

seq1  GGACAGAGAAGTAGCATGTTTAGTTCATGGTTTGAAGCAGAGGTTCTCAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAGAAGTAGCATGTTTAGTTCATGGTTTGAAGCAGAGGTTCTCAA  494

seq1  CGCGTGGGTCACAACCCCTTTGGCACATATTCAAATTTTGGCAATATTTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGTGGGTCACAACCCCTTTGGCACATATTCAAATTTTGGCAATATTTA  544

seq1  AATTGTGATTCATAAAAGTAGCAAAATCACAGTAATAAAGTAGGAAAGAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGATTCATAAAAGTAGCAAAATCACAGTAATAAAGTAGGAAAGAT  594

seq1  CACAACATGAGGACCTAGGTTAAAGGGTCACAGCATTAGGAAGGCTGAGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACATGAGGACCTAGGTTAAAGGGTCACAGCATTAGGAAGGCTGAGA  644

seq1  GCCACCACTGTAAAGGAATGGAGTTGGGTGTCCTGTTGAAAAAGGACTAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCACTGTAAAGGAATGGAGTTGGGTGTCCTGTTGAAAAAGGACTAC  694

seq1  AGAGGAGCCATGGAGGAACCCAAATTGAAAGGTAGTGAAATAATCTGTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGCCATGGAGGAACCCAAATTGAAAGGTAGTGAAATAATCTGTGT  744

seq1  GAATGATGGCAGTGATGGGAATGATAGGATGTGTTGGGCAGAATGTAAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATGGCAGTGATGGGAATGATAGGATGTGTTGGGCAGAATGTAAGA  794

seq1  ATTTGATGAATTCTTGAAAGAAGAAAAATATTCAAGGGCTAGTTCAACAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATGAATTCTTGAAAGAAGAAAAATATTCAAGGGCTAGTTCAACAA  844

seq1  ATTTCCCTTGTGGGGATAGGAAAGACTGTAAAAGATACAGGCGTAAAATA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCTTGTGGGGATAGGAAAGACTGTAAAAGATACAGGCGTAAAATA  894

seq1  TTCTTCTGTCTTTTTACTATCTAAACTGATGCTTAAGTGTTTTAATATCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTGTCTTTTTACTATCTAAACTGATGCTTAAGTGTTTTAATATCA  944

seq1  TTTCAAGTCTGCATACTTCCTTAATCCACTGGACCCCTTTTCCTTTGGAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGTCTGCATACTTCCTTAATCCACTGGACCCCTTTTCCTTTGGAA  994

seq1  TGCCAGGCTTGTGAACTTTTCATGTTTTCCCTCATCTCTTTTACAGGTCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGCTTGTGAACTTTTCATGTTTTCCCTCATCTCTTTTACAGGTCA  1044

seq1  CAAGCATAGGCAGATTTCTTCTACAGAGGTTCCACCAAATAAGGAAACAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATAGGCAGATTTCTTCTACAGAGGTTCCACCAAATAAGGAAACAT  1094

seq1  TATTTGTCAGTGTTGCCAAACATAGTACAGGAGGCTACCAAGAGATCAGC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTCAGTGTTGCCAAACATAGTACAGGAGGCTACCAAGAGATCAGC  1144

seq1  AGAGAATTC  1155
      |||||||||
seq2  AGAGAATTC  1153

seq1: chr19_31958731_31959861
seq2: B6Ng01-180D12.g_68_1197

seq1  GAATTCCAGGACAGTCTGCTCTTCAGAGTGAGTTCCAGGACTGCCAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGTCTGCTCTTCAGAGTGAGTTCCAGGACTGCCAGGGC  50

seq1  TACATGGATGAACACTATCTCAAAAGAACCAAAATAATTAATTTTATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGATGAACACTATCTCAAAAGAACCAAAATAATTAATTTTATGAT  100

seq1  GATGATGATGATGATAATGGTGATGTTACTATTGCTATTATTGTGGTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATGATGATGATAATGGTGATGTTACTATTGCTATTATTGTGGTTTA  150

seq1  CATGTGACAATAATATTGTAAAAATATTATTATCACATATAAATGACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGACAATAATATTGTAAAAATATTATTATCACATATAAATGACAAG  200

seq1  TTTTTAAGTTATCTTTATTCCTTTCGACCCACTCTGCCCTTTGTTTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGTTATCTTTATTCCTTTCGACCCACTCTGCCCTTTGTTTATCT  250

seq1  GTCCACTGATAGATGAGTCTCTCCATTAATGATTTAAGCATGGGGGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACTGATAGATGAGTCTCTCCATTAATGATTTAAGCATGGGGGGTTT  300

seq1  TTTGTTGTTGTTGCTGTTTGCATTTTACAGATATCATTCTTATCTACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTGTTGCTGTTTGCATTTTACAGATATCATTCTTATCTACTAT  350

seq1  TTATCTGCCAACCATTTATTGTAGTCGCTGCCAGAGTGACATTACAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGCCAACCATTTATTGTAGTCGCTGCCAGAGTGACATTACAATTA  400

seq1  TGTGTGCTTGTGATTTTTATGTAGTTAAATCTGGCAGTCCTTTCCATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCTTGTGATTTTTATGTAGTTAAATCTGGCAGTCCTTTCCATGTG  450

seq1  GGATTTTACACTTACTTTGAAAGACTCCATGCCACAGAGTATGAGTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTACACTTACTTTGAAAGACTCCATGCCACAGAGTATGAGTTTGT  500

seq1  TCTTCTGGGTTCTGGTAGTTACATAATGCTTATAAAGGTTATCTCTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGGGTTCTGGTAGTTACATAATGCTTATAAAGGTTATCTCTTTAA  550

seq1  TCCTCTTAGAAGTTGGACATAGGTTATTAGGTGATAGTCCAAATTTATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTAGAAGTTGGACATAGGTTATTAGGTGATAGTCCAAATTTATCT  600

seq1  CTTTCTCAAATTGTCCCTGACCCCCCCCCTCCCGTGATCTGAAATAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCAAATTGTCCCTGACCCCCCCCCTCCCGTGATCTGAAATAACAC  650

seq1  CTTTTGGCAAACACCAATCTCAAAACAACTACAAATGAAGGCTTTAGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGCAAACACCAATCTCAAAACAACTACAAATGAAGGCTTTAGATT  700

seq1  CCGTGACGTGGATTTTTCTGTTATT-GGGAGTGTTTAATTCCTTACTGTT  749
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCGTGACGTGGATTTTTCTGTTATTGGGGAGTGTTTAATTCCTTACTGTT  750

seq1  GGGTAAGCTGGCTCAAGATCATTCCATGTGTTTAATAAATCCTGTGGCAA  799
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGGTAAGCTGGCTC-AGATCATTCCATGTGTTTAATAAATCCTGTGGCAA  799

seq1  CCATCACATGTATTTTAACCGCCAGAAGAATTATGAGGTTAATTTCTCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACATGTATTTTAACCGCCAGAAGAATTATGAGGTTAATTTCTCAG  849

seq1  GTTTTAAAATAATAGAATCTAAATATGACAGATGTGGAAGAACAGATTTC  899
         || ||||||||||||||||||||||||||||||||||||||||||||
seq2  ---TTTAAATAATAGAATCTAAATATGACAGATGTGGAAGAACAGATTTC  896

seq1  CTGACATAATACACTTTTCACTTAAACTGTTCTTTAGGGTTTTCTGCTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATAATACACTTTTCACTTAAACTGTTCTTTAGGGTTTTCTGCTAA  946

seq1  ACTTTATCATTTTCTTCACATGATTTCGGGCACTTCTTATGTTTATTATT  999
      ||||||||||||||||||||||||||| ||||||||||||||||||||  
seq2  ACTTTATCATTTTCTTCACATGATTTC-GGCACTTCTTATGTTTATTACC  995

seq1  TCCCTTTATTGGTCAGA-TTTTCTCCTGGTGTCTTGTTTGTTCTCTTAGC  1048
       ||| |||||||||||| |||||| ||||  ||||||||| |||||||||
seq2  CCCCATTATTGGTCAGATTTTTCTTCTGGGTTCTTGTTTG-TCTCTTAGC  1044

seq1  AAGCATTCATTCTTACCCTCGGAGTGC-TCTC-TGACTAGCTGCACTACA  1096
      |||||||||||| ||||||| |||||| |||| |||||||||||||||||
seq2  AAGCATTCATTC-TACCCTC-GAGTGCTTCTCTTGACTAGCTGCACTACA  1092

seq1  GTGTTATTGAACTGACTGGC--TTATTCT-GAATAATA  1131
      ||||||||||||||||||||  ||| ||| ||||||||
seq2  GTGTTATTGAACTGACTGGCCTTTAATCTGGAATAATA  1130