BAC Information

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BAC

Clone NameB6Ng01-184B06
Chromosome19 (Build37)
Map Location 10,232,465 - 10,232,958
singlet/doubletsinglet
Overlap genenone
Upstream geneEG621699, LOC100040104, LOC623810, Pcna-ps2, LOC100040130, LOC100040137, LOC100040143, LOC100040152, Stxbp3b, LOC623688, LOC100040178, LOC100040192, 6720475J19Rik, LOC100040203, Incenp, LOC100040215, Fth1, Best1, Rab3il1, Fads3, Fads2
Downstream geneLOC100040227, Fads1, Fen1, 1810006K21Rik, Gm98, Dagla, Syt7, Gm705, 4930579J09Rik, 0610038F07Rik, 5730453I16Rik, 2810441K11Rik, Tmem138, Cybasc3, Dak, Ddb1, Vwce, Pga5, 2210404E10Rik, Vps37c, Cd5, Cd6, Slc15a3, Tmem132a, Tmem109, Prpf19, Zp1, Gpr44, Ccdc86, Ms4a10, E530011F12Rik, 5033428B15Rik, AW112010, Ms4a8a, Gm336, LOC624395, 1700025F22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184B06.g
ACCGA009545
length488
definitionB6Ng01-184B06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cctgtcactttagcttctgtaggtgtgctcaggaggaagccagtgggaca
gtgagattaaaaattgtctgcttccattccaccaaggttcacagtttctc
tctgtttactcatgatgcccatcaatggttttacatattttgtccagttt
gacagtgattatggctttgcatccctgggaaggttgtcagccatgaggaa
aaatgtaagatgtcagctactgcctcagaacttgtcttggaaagcacatg
agatgccgtctgtgaaatgcttaggattccttctgggaaatgataagtcc
tcaaacttgtgaggtctttttttttttttttttttttaaagacttattta
tttatatgtaggtacactgtagctatcttcagactctttagaagagggag
tcccacctcgttactgatggttgtgagccaccatgtggttgctgggattt
gaactccggaccttcggaagaacattgggtgctcttac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_10232465_10232958
seq2: B6Ng01-184B06.g_70_563

seq1  GAATTCCCTGTCACTTCAGCATCTGTAGGTGTGCTCAGGAGGAAGCCAGT  50
      |||||||||||||||| ||| |||||||||||||||||||||||||||||
seq2  GAATTCCCTGTCACTTTAGCTTCTGTAGGTGTGCTCAGGAGGAAGCCAGT  50

seq1  GGGACAGTGAGATT-CACTTTGTCTGCTTCCATTCCACCAAGGTTCACAG  99
      ||||||||||||||  |  |||||||||||||||||||||||||||||||
seq2  GGGACAGTGAGATTAAAAATTGTCTGCTTCCATTCCACCAAGGTTCACAG  100

seq1  TTTCTCTCTGTTTACTCATGATGCCCATCAATGGTTTTACATATTTTGTC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCTGTTTACTCATGATGCCCATCAATGGTTTTACATATTTTGTC  150

seq1  CAGTTTGACAGTGATTATGGCTTTGCATCCCTGGGAAGGTTGTCAGCCAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGACAGTGATTATGGCTTTGCATCCCTGGGAAGGTTGTCAGCCAT  200

seq1  GAGGAAAAATGTAAGATGTCAGCTACTGCCTCAGAACTTGTCTTGGAAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAAATGTAAGATGTCAGCTACTGCCTCAGAACTTGTCTTGGAAAG  250

seq1  CACATGAGATGCCGTCTGTGAAATGCTTAGGATTCCTTCTGGGAAATGAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAGATGCCGTCTGTGAAATGCTTAGGATTCCTTCTGGGAAATGAT  300

seq1  AAGTCCTCAAACTTGTGAGGTCTTTTTTTTTTTTTTTTTTTTTAAAGACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTCAAACTTGTGAGGTCTTTTTTTTTTTTTTTTTTTTTAAAGACT  350

seq1  TATTTATTTATATGTAGGTACACTGTAGCTATCTTCAGACACTCCAGAAG  399
      |||||||||||||||||||||||||||||||||||||||| ||  |||||
seq2  TATTTATTTATATGTAGGTACACTGTAGCTATCTTCAGACTCTTTAGAAG  400

seq1  AGGGAGTCAGACCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTG  449
      ||||||||  |||||||||| |||||||||||||||||||||||||||||
seq2  AGGGAGTCCCACCTCGTTACTGATGGTTGTGAGCCACCATGTGGTTGCTG  450

seq1  GGATTTGAACTCCGGACCTTCGGAAGAGCAGTTGGGTGCTCTTAC  494
      ||||||||||||||||||||||||||| || ||||||||||||||
seq2  GGATTTGAACTCCGGACCTTCGGAAGAACA-TTGGGTGCTCTTAC  494