BAC Information

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BAC

Clone NameB6Ng01-184M12
Chromosome19 (Build37)
Map Location 48,903,648 - 48,904,814
singlet/doubletsinglet
Overlap genenone
Upstream geneD19Ertd652e, LOC677174, Gsto1, Gsto2, BC063749, Gm969, LOC670576, Sorcs3, LOC100042896
Downstream geneLOC629448
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184M12.bB6Ng01-184M12.g
ACCGA010069GA010070
length1,2311,170
definitionB6Ng01-184M12.b B6Ng01-184M12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcatctttccaagacttttatcatgaatgggtgttggatcttg
ttgaatgctttttccgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
attgatattcataagggaaattggtctgaagtactctatctttgttggat
ctttctgtggtttaggtatcagagtaattgtggcgtcatagaatgagttg
ggtagagatccctctacttctattttgtggaatagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaatgactgcttctatttcc
ttaggggatatgggactgtttagatcattaacttgatcctgatttaacat
tcgtacctggtatcttctctagaaatttgtccatttcatccaggttttcc
agttttgttgagtatagccttttgtagaaggatctgatggtattttggat
ttcttcaggatctgttgttatgtctcccttttcatttctgattttgttaa
tttggatgttgtccctgtgccctctggtgagtctagctaagggtttatct
atcttgttgattttctcaaagaaccaactcctcgtttggttaattctttg
aatagttctttcttgtttccacttggttgatttcacccctgagtttggtt
atttcctgccctgcccgtctactcctcttgggtgaatttgcttccttttt
tttctagagcttttagatgttgtgtcaagctgctagtatgtgctctctcc
cgttttcttcttgggaggcacctcagagctatgaatttcccctcttagaa
tgcttcattgtcctcccataagtttgggtattgtgtggcttcattttcat
aaactctaaaaagtctttatttctttctttattccttccttgacaaggca
ttcattggaaagagtggtggttcagtcttccacgtgaatgtttgggcttc
catatcttagggtgtattgcagatcgccaggttagatctgtatcagcata
tacatgggcaacatatactcatatatttctg

gaattctcattatcttagagttctcttgccacagtgaagatcacagcaca
agagaagttcagcggttggtccccagccaggcctctgggaccggcagaca
tgctttgtggggcatataattgtttgttctgttttatggaggcataattg
aggtaaaatgaattacacatatatttagagtctacagtttggtaagtttt
gacctatgtctaaacctatgaaaacatcatcacaattaagataataaata
ttcttatgagattatttgggccaatttagaattcatcacccaaccccaat
cctaaccattaacctacttctgtcactacagacttaaatacatcttatat
aaatgtgtgtacatttattcatagtattcttttattgtatgctttagaag
gcaatttcttttcatttctgagtagtgttccattatattgatagactata
atgtacgcatatacatgtatatacatggattataaatgaattcaactaaa
cagacacttatggatgtagattagataccataacccatatacatattata
attttaaagtgccaataggtgttctggttttgattctcacagatatttgc
cataagcatcagtggattcgtctttagatgctttaaattgtcttccataa
attttcagtgatgctaccagagtgatatggtacccctgtgtttctctctg
tgataaaccaagaaatcatgttccaaagcagattgtttgttcctctacct
gagacgaggtttctaactcttattgtagctaggcttgaaatgatctttac
taggtgttcaaatacacacccatggttttaaatttgaaccctaaagatta
atagtgagtacttatctttccttggttttattgggcattctcctgattta
attttgggacacagtttaaacctggaattgttttcttatggtaaattgaa
aagttctttatgtatttttaaaagattggttcatttttgctatgtatgtt
tcttgtgtttgacttttatgggtcttgtacatatgtgtgtcagtgacaga
cagagaagggtgttcaagcttctatcaactagagttacagtacttatgag
cctgcctgatgtggggagccaaccaacctgcaaccttgacaagagcatca
agcattccctactatgaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_48903648_48904814
seq2: B6Ng01-184M12.g_71_1240

seq1  GAATTCTCATTATCTTAGAGTTCTCTTGCCACAGTGAAGATCACAGCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTATCTTAGAGTTCTCTTGCCACAGTGAAGATCACAGCACA  50

seq1  AGAGAAGTTCAGCGGTTGGTCCCCAGCCAGGCCTCTGGGACCGGCAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGTTCAGCGGTTGGTCCCCAGCCAGGCCTCTGGGACCGGCAGACA  100

seq1  TGCTTTGTGGGGCATATAATTGTTTGTTCTGTTTTATGGAGGCATAATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTGGGGCATATAATTGTTTGTTCTGTTTTATGGAGGCATAATTG  150

seq1  AGGTAAAATGAATTACACATATATTTAGAGTCTACAGTTTGGTAAGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAATGAATTACACATATATTTAGAGTCTACAGTTTGGTAAGTTTT  200

seq1  GACCTATGTCTAAACCTATGAAAACATCATCACAATTAAGATAATAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTATGTCTAAACCTATGAAAACATCATCACAATTAAGATAATAAATA  250

seq1  TTCTTATGAGATTATTTGGGCCAATTTAGAATTCATCACCCAACCCCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATGAGATTATTTGGGCCAATTTAGAATTCATCACCCAACCCCAAT  300

seq1  CCTAACCATTAACCTACTTCTGTCACTACAGACTTAAATACATCTTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACCATTAACCTACTTCTGTCACTACAGACTTAAATACATCTTATAT  350

seq1  AAATGTGTGTACATTTATTCATAGTATTCTTTTATTGTATGCTTTAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTGTACATTTATTCATAGTATTCTTTTATTGTATGCTTTAGAAG  400

seq1  GCAATTTCTTTTCATTTCTGAGTAGTGTTCCATTATATTGATAGACTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTCTTTTCATTTCTGAGTAGTGTTCCATTATATTGATAGACTATA  450

seq1  ATGTACGCATATACATGTATATACATGGATTATAAATGAATTCAACTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACGCATATACATGTATATACATGGATTATAAATGAATTCAACTAAA  500

seq1  CAGACACTTATGGATGTAGATTAGATACCATAACCCATATACATATTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACTTATGGATGTAGATTAGATACCATAACCCATATACATATTATA  550

seq1  ATTTTAAAGTGCCAATAGGTGTTCTGGTTTTGATTCTCACAGATATTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGTGCCAATAGGTGTTCTGGTTTTGATTCTCACAGATATTTGC  600

seq1  CATAAGCATCAGTGGATTCGTCTTTAGATGCTTTAAATTGTCTTCCATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCATCAGTGGATTCGTCTTTAGATGCTTTAAATTGTCTTCCATAA  650

seq1  ATTTTCAGTGATGCTACCAGAGTGATATGGTACCCCTGTGTTTCTCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGTGATGCTACCAGAGTGATATGGTACCCCTGTGTTTCTCTCTG  700

seq1  TGATAAACCAAGAAATCATGTTCCAAAGCAGATTGTTTGTTCCTCTACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAACCAAGAAATCATGTTCCAAAGCAGATTGTTTGTTCCTCTACCT  750

seq1  GAGACGAGGTTTCTAACTCTTATTGTAGCTAGGCTTGAAATGATC-TTAC  799
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAGACGAGGTTTCTAACTCTTATTGTAGCTAGGCTTGAAATGATCTTTAC  800

seq1  TAGGTGTTCAAATACACACCAATGGTTTTAAATTTGAACCCTAAAGATTA  849
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TAGGTGTTCAAATACACACCCATGGTTTTAAATTTGAACCCTAAAGATTA  850

seq1  ATAGTGAGTACTTATCTTTCCTTGGTTTTATTGGGCATTCTCCTGATTTT  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATAGTGAGTACTTATCTTTCCTTGGTTTTATTGGGCATTCTCCTGA-TTT  899

seq1  AATTTTTGGACACAGTTTAAACCTGGAA-TGTTTTCTTAT-GTTAATTGA  947
      |||||| ||||||||||||||||||||| ||||||||||| || ||||||
seq2  AATTTTGGGACACAGTTTAAACCTGGAATTGTTTTCTTATGGTAAATTGA  949

seq1  AAAGTTCTTTATGTA-TTTTAAAAGATTTGTTCATTTTTGCTATGTATGT  996
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  AAAGTTCTTTATGTATTTTTAAAAGATTGGTTCATTTTTGCTATGTATGT  999

seq1  TTC-TGTGGTTGAC-TCTATGGGTC-TGTACCATATGTGTGTCAGTGACA  1043
      ||| |||| ||||| | |||||||| |||| |||||||||||||||||||
seq2  TTCTTGTGTTTGACTTTTATGGGTCTTGTA-CATATGTGTGTCAGTGACA  1048

seq1  GACAGAAGAGGGTGTTCAGTCTCCTA-CAACTAGAGTTACAAGTACTAAT  1092
      ||||||  ||||||||||  || ||| ||||||||||||| |||||| ||
seq2  GACAGAGAAGGGTGTTCAAGCTTCTATCAACTAGAGTTAC-AGTACTTAT  1097

seq1  GAG-CTGCCTGATGTGGGGGAGCAAACAAAACTGCAACCCCTGGACAAGA  1141
      ||| ||||||||||| ||||||| ||| || ||||||  ||| |||||||
seq2  GAGCCTGCCTGATGT-GGGGAGCCAACCAACCTGCAA--CCTTGACAAGA  1144

seq1  GCATCAAGCATTCCTAACTATGAACC  1167
      ||||||||||||||  ||||||||||
seq2  GCATCAAGCATTCCCTACTATGAACC  1170


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