BAC Information

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BAC

Clone NameB6Ng01-186E22
Chromosome19 (Build37)
Map Location 60,754,344 - 60,857,485
singlet/doubletdoublet
Overlap geneNanos1, Eif3s10
Upstream geneRab11fip2, LOC100043087, LOC100043091, LOC100043093, D19Ertd737e, 4933412A08Rik, Prlhr, 2700078E11Rik
Downstream gene1810055E12Rik, Sfxn4, Prdx3, Gprk5, LOC671322, BC029127, LOC100043112, EG547091, LOC433261, EG633057, Csf2ra, LOC100043120
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186E22.bB6Ng01-186E22.g
ACCGA011185GA011186
length1,1571,027
definitionB6Ng01-186E22.b B6Ng01-186E22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,856,336 - 60,857,485)(60,754,344 - 60,755,370)
sequence
gaattcctgatcacagcaaagtaggaaatgatataaaatagttttcaatg
catttttctttgtagtgttctcttaagtgcagtaagtggggaagatactc
aggatcgtactgacagattgctactgactccctgggtcaagttcctgtgg
gaatcatacaggcagtgtttggaccttcttcgaaacaattctagagtaga
gcgcctttaccatgatatcgcccaacaaggtaaaatgacagtgtaaaata
taaataaactgatttgaaaagttgactttagaattttgtagagtaacttt
cagttctctataccatttaaaaatagaactagttttatccttagtaaaat
gagattgacatttattagataagtagctgaagaagataatttgtctttac
agttaatattttccatatgaaattcctctgacttttgaaacccttttctg
cttttaaagttagcacacagtagtaggcttcattatggtatttttatgtt
ataattcattactgatcatcacccccccccccattgtcaactccttactt
tctctgtgttggccctgtctgtctccccaccaaataccagatattccttc
ctcttggttccatgttatatgtattgtatgttcccctcatccccaatttc
ttacctcttcattttttgggtagccttacatacttggaattattttaggg
gaagacatgcttctctgtaagtcctcgctatcttggcattcactttagac
cagggtggccttgatatcaaaaatctgtctctttctgctttctgggtgtt
gggattaaaggcaagcaccaatatgcccactgtatttgttttttttcctt
tttgttcttacatagtagtactttgatcacttcctactttgttgcctctc
agcatacacttatctctaaaggactagattgaagtaaatctttctttttt
taaagatttacttatttgaggtatgagtacattgtagctgtcttcagacc
acaccagaagagggcatcagatctcattctcatagtgattgtgagccact
atgtgttgcctggaattggaagtcaggaccctgtaaggagtagtcagtat
ttcttgatagcaatcttgccttcaggtgaaaaataggcttgtacctgagt
gacttga
gaattcccaactgggaaacagatttagatgagagtcagttgattgtcagc
tcacagccaagctgagaagcaagtaagtccccataaagcccatgaagctc
taaaggagaatctcaccataatacaggaagtgggcagctattgtcctcat
ctgacacaggggaacactgaccagcactggtcccaaacccttctagacta
gatatttgagcataagactttgtaaatgttgcttctttctcagaagagaa
gtgctgaatctcactaaccaagccatcctctagtctcaggcttgttccaa
tacttactaaaacctaaataaaatgaacctctttcaaggtatgtctcagc
acagggtttcacccaaagaaacccaaagtacagttacttaaaactttgaa
aagaaactgttacacacctcaagaggaagccacaaacaagaagcttcctg
tgttagctacttttcccaacactgggacagagtacctgacagaaacaaga
gaggaggatttttattttggctcacagtttgagtaggaacagttcatcat
ggtgggaaagacacagttcatcatggtgggaaaaacatgcagtaaaccca
gctcctggggtgggggtgggaggcataaggctgcttgccctcaccttggg
acagaaagcctgagccagaagaggagatggtctagaaccctcaagcccca
ttcctatatccctatgtctgcagctagactctgtcataaaagtttcatga
cctctcaaaatagtatcattcaactcccttcatcctctggctacttctag
cttctcagtgactcattgccaagcaaaatctcagccaactgctggtgtct
gctagaaacagatgtggctgcttaaatcagaaaaaccccatttgtcagag
cctttaacatgcaaggtcatatcaagttctggggattctctttctagggg
cgtctcgtctcaaggggaaggcctctttaccttaggcatccaccatccct
caactgtgtgaagcatggacccactgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_60856336_60857485
seq2: B6Ng01-186E22.b_44_1200 (reverse)

seq1  TCAAGTCACTCAGTTACAAGCCTA-TTTTCA-CTGGAGCAAAGAATGCTA  48
      ||||||||||||| |||||||||| |||||| ||| ||  |||| |||||
seq2  TCAAGTCACTCAGGTACAAGCCTATTTTTCACCTGAAGGCAAGATTGCTA  50

seq1  TCAAG-AATACTGACTACT-CTTACAGGGTCCTGACTT-CAATTCCCAGC  95
      ||||| ||||||||||||| |||||||||||||||||| |||||||  ||
seq2  TCAAGAAATACTGACTACTCCTTACAGGGTCCTGACTTCCAATTCCAGGC  100

seq1  AACCACATAGTGGCTCACAACCACTATGAGAATGAGATCTGATGCCCTCT  145
      || ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AA-CACATAGTGGCTCACAATCACTATGAGAATGAGATCTGATGCCCTCT  149

seq1  TCTGGTGT-GTCTGAAGACAGCTACAATGTACTCATACCTCAAATAAGTA  194
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGTGGTCTGAAGACAGCTACAATGTACTCATACCTCAAATAAGTA  199

seq1  AATCTTT--AAAAAGAAAGATTTACTTCAATCTAGTCCTTTAGAGATAAG  242
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTAAAAAAAGAAAGATTTACTTCAATCTAGTCCTTTAGAGATAAG  249

seq1  TGTATGCTGAGAGGCAACAAAGTAGGAAGTGATCAAAGTACTACTATGTA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCTGAGAGGCAACAAAGTAGGAAGTGATCAAAGTACTACTATGTA  299

seq1  AGAACAAAAAGG-AAAAAAACAAATACAGTGGGCATATTGGTGCTTGCCT  341
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAAAGGAAAAAAAACAAATACAGTGGGCATATTGGTGCTTGCCT  349

seq1  TTAATCCCAACACCCAGAAAGCAGAAAGAGACAGATTTTTGATATCAAGG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCCAACACCCAGAAAGCAGAAAGAGACAGATTTTTGATATCAAGG  399

seq1  CCACCCTGGTCTAAAGTGAATGCCAAGATAGCGAGGACTTACAGAGAAGC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTGGTCTAAAGTGAATGCCAAGATAGCGAGGACTTACAGAGAAGC  449

seq1  ATGTCTTCCCCTAAAATAATTCCAAGTATGTAAGGCTACCCAAAAAATGA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTCCCCTAAAATAATTCCAAGTATGTAAGGCTACCCAAAAAATGA  499

seq1  AGAGGTAAGAAATTGGGGATGAGGGGAACATACAATACATATAACATGGA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAAGAAATTGGGGATGAGGGGAACATACAATACATATAACATGGA  549

seq1  ACCAAGAGGAAGGAATATCTGGTATTTGGTGGGGAGACAGACAGGGCCAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAGGAAGGAATATCTGGTATTTGGTGGGGAGACAGACAGGGCCAA  599

seq1  CACAGAGAAAGTAAGGAGTTGACAATGGGGGGGGGGGGTGATGATCAGTA  641
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CACAGAGAAAGTAAGGAGTTGACAAT-GGGGGGGGGGGTGATGATCAGTA  648

seq1  ATGAATTATAACATAAAAATACCATAATGAAGCCTACTACTGTGTGCTAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTATAACATAAAAATACCATAATGAAGCCTACTACTGTGTGCTAA  698

seq1  CTTTAAAAGCAGAAAAGGGTTTCAAAAGTCAGAGGAATTTCATATGGAAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAAGCAGAAAAGGGTTTCAAAAGTCAGAGGAATTTCATATGGAAA  748

seq1  ATATTAACTGTAAAGACAAATTATCTTCTTCAGCTACTTATCTAATAAAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAACTGTAAAGACAAATTATCTTCTTCAGCTACTTATCTAATAAAT  798

seq1  GTCAATCTCATTTTACTAAGGATAAAACTAGTTCTATTTTTAAATGGTAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATCTCATTTTACTAAGGATAAAACTAGTTCTATTTTTAAATGGTAT  848

seq1  AGAGAACTGAAAGTTACTCTACAAAATTCTAAAGTCAACTTTTCAAATCA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACTGAAAGTTACTCTACAAAATTCTAAAGTCAACTTTTCAAATCA  898

seq1  GTTTATTTATATTTTACACTGTCATTTTACCTTGTTGGGCGATATCATGG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTATATTTTACACTGTCATTTTACCTTGTTGGGCGATATCATGG  948

seq1  TAAAGGCGCTCTACTCTAGAATTGTTTCGAAGAAGGTCCAAACACTGCCT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCGCTCTACTCTAGAATTGTTTCGAAGAAGGTCCAAACACTGCCT  998

seq1  GTATGATTCCCACAGGAACTTGACCCAGGGAGTCAGTAGCAATCTGTCAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGATTCCCACAGGAACTTGACCCAGGGAGTCAGTAGCAATCTGTCAG  1048

seq1  TACGATCCTGAGTATCTTCCCCACTTACTGCACTTAAGAGAACACTACAA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGATCCTGAGTATCTTCCCCACTTACTGCACTTAAGAGAACACTACAA  1098

seq1  AGAAAAATGCATTGAAAACTATTTTATATCATTTCCTACTTTGCTGTGAT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATGCATTGAAAACTATTTTATATCATTTCCTACTTTGCTGTGAT  1148

seq1  CAGGAATTC  1150
      |||||||||
seq2  CAGGAATTC  1157

seq1: chr19_60754344_60755370
seq2: B6Ng01-186E22.g_68_1094

seq1  GAATTCCCAACTGGGAAACAGATTTAGATGAGAGTCAGTTGATTGTCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAACTGGGAAACAGATTTAGATGAGAGTCAGTTGATTGTCAGC  50

seq1  TCACAGCCAAGCTGAGAAGCAAGTAAGTCCCCATAAAGCCCATGAAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCCAAGCTGAGAAGCAAGTAAGTCCCCATAAAGCCCATGAAGCTC  100

seq1  TAAAGGAGAATCTCACCATAATACAGGAAGTGGGCAGCTATTGTCCTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAGAATCTCACCATAATACAGGAAGTGGGCAGCTATTGTCCTCAT  150

seq1  CTGACACAGGGGAACACTGACCAGCACTGGTCCCAAACCCTTCTAGACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACAGGGGAACACTGACCAGCACTGGTCCCAAACCCTTCTAGACTA  200

seq1  GATATTTGAGCATAAGACTTTGTAAATGTTGCTTCTTTCTCAGAAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTGAGCATAAGACTTTGTAAATGTTGCTTCTTTCTCAGAAGAGAA  250

seq1  GTGCTGAATCTCACTAACCAAGCCATCCTCTAGTCTCAGGCTTGTTCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGAATCTCACTAACCAAGCCATCCTCTAGTCTCAGGCTTGTTCCAA  300

seq1  TACTTACTAAAACCTAAATAAAATGAACCTCTTTCAAGGTATGTCTCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACTAAAACCTAAATAAAATGAACCTCTTTCAAGGTATGTCTCAGC  350

seq1  ACAGGGTTTCACCCAAAGAAACCCAAAGTACAGTTACTTAAAACTTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTTTCACCCAAAGAAACCCAAAGTACAGTTACTTAAAACTTTGAA  400

seq1  AAGAAACTGTTACACACCTCAAGAGGAAGCCACAAACAAGAAGCTTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACTGTTACACACCTCAAGAGGAAGCCACAAACAAGAAGCTTCCTG  450

seq1  TGTTAGCTACTTTTCCCAACACTGGGACAGAGTACCTGACAGAAACAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGCTACTTTTCCCAACACTGGGACAGAGTACCTGACAGAAACAAGA  500

seq1  GAGGAGGATTTTTATTTTGGCTCACAGTTTGAGTAGGAACAGTTCATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGATTTTTATTTTGGCTCACAGTTTGAGTAGGAACAGTTCATCAT  550

seq1  GGTGGGAAAGACACAGTTCATCATGGTGGGAAAAACATGCAGTAAACCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAAAGACACAGTTCATCATGGTGGGAAAAACATGCAGTAAACCCA  600

seq1  GCTCCTGGGGTGGGGGTGGGAGGCATAAGGCTGCTTGCCCTCACCTTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGGGGTGGGGGTGGGAGGCATAAGGCTGCTTGCCCTCACCTTGGG  650

seq1  ACAGAAAGCCTGAGCCAGAAGAGGAGATGGTCTAGAACCCTCAAGCCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGCCTGAGCCAGAAGAGGAGATGGTCTAGAACCCTCAAGCCCCA  700

seq1  TTCCTATATCCCTATGTCTGCCAGCTAGACTCTGTCATAAAAGTTTCATG  750
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTCCTATATCCCTATGTCTG-CAGCTAGACTCTGTCATAAAAGTTTCATG  749

seq1  ACCTCTCAAAATAGTATCATTCAACTCCCTTCATCCTCTGGCTACTTCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCAAAATAGTATCATTCAACTCCCTTCATCCTCTGGCTACTTCTA  799

seq1  GCTTCTTCCAGTGACTCATTGCCAAGCAAAATCTCAGCCAACTGCT-GTG  849
      ||||||  |||||||||||||||||||||||||||||||||||||| |||
seq2  GCTTCT--CAGTGACTCATTGCCAAGCAAAATCTCAGCCAACTGCTGGTG  847

seq1  TCTGCTAGAAACAGATGTGGCTGCTTAAATCAGAAAAA-CCCAATTGTCA  898
      |||||||||||||||||||||||||||||||||||||| |||| ||||||
seq2  TCTGCTAGAAACAGATGTGGCTGCTTAAATCAGAAAAACCCCATTTGTCA  897

seq1  GAGCCTTTAACATGCAAGGTCATATCAAAGTTCTGGGGATTCTCTTTCTA  948
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAGCCTTTAACATGCAAGGTCATATC-AAGTTCTGGGGATTCTCTTTCTA  946

seq1  -GGGCGTCTCGTCTCAAAGGGGAAGGCCCCTTACCCTTAGGCCTTCCACA  997
       |||||||||||||| |||||||||||| |||  |||||||| | |  ||
seq2  GGGGCGTCTCGTCTC-AAGGGGAAGGCCTCTTTACCTTAGGCATCCACCA  995

seq1  CCCCTCAGCTGTGTGAAGCATG--ACCACTGC  1027
       |||||| ||||||||||||||   |||||||
seq2  TCCCTCAACTGTGTGAAGCATGGACCCACTGC  1027