BAC Information

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BAC

Clone NameB6Ng01-190P14
Chromosome19 (Build37)
Map Location 52,347,160 - 52,348,171
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042924, LOC100042928, LOC668536, LOC100042936, Ins1
Downstream geneLOC100043450, Xpnpep1, LOC668545, LOC674277, Add3, 1700001K23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190P14.bB6Ng01-190P14.g
ACCGA014593GA014594
length1,107519
definitionB6Ng01-190P14.b B6Ng01-190P14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctataattatatcagtgtttattaagctcttttatagtgggact
gctattaggtccttttctgatagtcaaaactgcaatgagaactctgctag
tctcccaagtgtcaccagttaattgctcttagatagtaaccagactttct
cctattcagagcacattccaagaggttataaaacaattaaccaaaggtca
taaaaagggaactaatgatttgctataggtgttaggacagaagataaaat
attgactggttttatctataggaagcatcactgacaacttagttttggtt
ttaaaccttcattgagcctgtggagctgagagagatgatggatgtttagc
tagataatttctcctaatagatatgcatgtaaacatttgctgttgtaaac
ttctatttcgatttatgatttgattttttgtgtgaacttgtgatgaactt
tgtaacatgtaatcatgtattctgaaagatgtataagtactgaggataaa
gagatagagaaggatctattcctttagaagaatttttcccttactagaat
tttttgtctttccctgcatagagaagaatttcttccctttctccacttag
aagaatttttccctttccctgcttaagatctttgtgctttcccccttgga
tacctttcatagaaaactttttacaacttagtaataaactaataaatgct
atatttattgttctttttttctatttagattactttattagtttttttta
ttggatattttctttatttacatttcaaatgttatcccctgtcctgggtt
tccctccctcctggaaacaccctacatatcctccctccctctgcttctat
gagggtggttccaacacccacccacccacccactcctacctccccgcctg
gattcccctacactgtggcatctattgaaccttcatagggcaaggacctc
ttctctcattgatgcatgacagggccaacctttgctatatatgcagctga
gcatgtgtacctcctttgttgatggctagtcccttggagtttctgtgggg
cttgaatgttgattatgttctctctatggggtggcaaaccccttcagtcc
ttctcta

tctgactaggtctgttccccatttttaatagggttatttgattctctgga
atctaacttcttgagttcttggtatagattggatattagccctatattgg
atataggattggtaaagatcttttcccactctgatggttgctgttttgtc
ctattaacagtgtcctttgctttatagaagcatttcaattttatgaggtc
ccatttgtcgattgttaatattagagcataagctttaaagcaatgacttc
atgaaatttgcaggcaaatggatggtactataaattatcatcctgattga
ggtaactcagtcacaaaagaacacagatggtagatactcactaattagtg
gatattagacaaaaccctaggaatacctacaaaacaaatcacagaccata
tgaagctcaggaataaagaatatcaaagtgtggatgcttcagtcctactt
ataagggagaacaaaatagtcattggaggtagagggtaggagggacttgg
gaggaagaaaggaggtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_52347160_52348171
seq2: B6Ng01-190P14.b_144_1153 (reverse)

seq1  TAGAGAAAGGACTGAAGGGGTTTGCAACCCCATAGGAAGAACATTATCAA  50
      ||||| ||||||||||||||||||| |||||||||  ||||||| |||||
seq2  TAGAG-AAGGACTGAAGGGGTTTGCCACCCCATAGAGAGAACATAATCAA  49

seq1  CCAATCAGACCCCACAG-AACTCCCAGGGACTAAGCCATCAACAAAGGA-  98
       || |||  |||||||| |||||| ||||||| |||||||||||||||| 
seq2  -CATTCAAGCCCCACAGAAACTCCAAGGGACT-AGCCATCAACAAAGGAG  97

seq1  GTACACATGGCTCCAGCTGCATATATAGCAAAGGTTGGCCTTGTCATGCA  148
      |||||||| ||| ||||||||||||||||||||||||||| |||||||||
seq2  GTACACAT-GCT-CAGCTGCATATATAGCAAAGGTTGGCCCTGTCATGCA  145

seq1  TCAATGAGAGAAGAGGTCCTTGGCCCTATGAAGGTTCAATAGATGCCACA  198
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCAATGAGAGAAGAGGTCCTT-GCCCTATGAAGGTTCAATAGATGCCACA  194

seq1  GTGTAGGGGAATCCAGGCGGGGAGGTAGGAGTGGGTGGGTGGGTGGGTGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGGGGAATCCAGGCGGGGAGGTAGGAGTGGGTGGGTGGGTGGGTGT  244

seq1  TGGAA-CACCCTCATAGAAGCAGAGGGAGGGAGGATATGTAGGGTGTTTC  297
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACCACCCTCATAGAAGCAGAGGGAGGGAGGATATGTAGGGTGTTTC  294

seq1  CAGGAGGGAGGGAAA-CCAGGACAGGGGATAACATTTGAAATGTAAATAA  346
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAGGAGGGAGGGAAACCCAGGACAGGGGATAACATTTGAAATGTAAATAA  344

seq1  AGAAAATATCCAATAAAAAAAACTAATAAAGTAATCTAAATAGAAAAAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATATCCAATAAAAAAAACTAATAAAGTAATCTAAATAGAAAAAAA  394

seq1  GAACAATAAATATAGCATTTATTAGTTTATTACTAAGTTGTAAAAAGTTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATAAATATAGCATTTATTAGTTTATTACTAAGTTGTAAAAAGTTT  444

seq1  TCTATGAAAGGTATCCAAGGGGGAAAGCACAAAGATCTTAAGCAGGGAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAAAGGTATCCAAGGGGGAAAGCACAAAGATCTTAAGCAGGGAAA  494

seq1  GGGAAAAATTCTTCTAAGTGGAGAAAGGGAAGAAATTCTTCTCTATGCAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAATTCTTCTAAGTGGAGAAAGGGAAGAAATTCTTCTCTATGCAG  544

seq1  GGAAAGACAAAAAATTCTAGTAAGGGAAAAATTCTTCTAAAGGAATAGAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGACAAAAAATTCTAGTAAGGGAAAAATTCTTCTAAAGGAATAGAT  594

seq1  CCTTCTCTATCTCTTTATCCTCAGTACTTATACATCTTTCAGAATACATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCTATCTCTTTATCCTCAGTACTTATACATCTTTCAGAATACATG  644

seq1  ATTACATGTTACAAAGTTCATCACAAGTTCACACAAAAAATCAAATCATA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGTTACAAAGTTCATCACAAGTTCACACAAAAAATCAAATCATA  694

seq1  AATCGAAATAGAAGTTTACAACAGCAAATGTTTACATGCATATCTATTAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGAAATAGAAGTTTACAACAGCAAATGTTTACATGCATATCTATTAG  744

seq1  GAGAAATTATCTAGCTAAACATCCATCATCTCTCTCAGCTCCACAGGCTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATTATCTAGCTAAACATCCATCATCTCTCTCAGCTCCACAGGCTC  794

seq1  AATGAAGGTTTAAAACCAAAACTAAGTTGTCAGTGATGCTTCCTATAGAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGGTTTAAAACCAAAACTAAGTTGTCAGTGATGCTTCCTATAGAT  844

seq1  AAAACCAGTCAATATTTTATCTTCTGTCCTAACACCTATAGCAAATCATT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAGTCAATATTTTATCTTCTGTCCTAACACCTATAGCAAATCATT  894

seq1  AGTTCCCTTTTTATGACCTTTGGTTAATTGTTTTATAACCTCTTGGAATG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCTTTTTATGACCTTTGGTTAATTGTTTTATAACCTCTTGGAATG  944

seq1  TGCTCTGAATAGGAGAAAGTCTGGTTACTATCTAAGAGCAATTAACTGGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGAATAGGAGAAAGTCTGGTTACTATCTAAGAGCAATTAACTGGT  994

seq1  GACACTTGGGAGACTA  1012
      ||||||||||||||||
seq2  GACACTTGGGAGACTA  1010


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