BAC Information

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BAC

Clone NameB6Ng01-191M09
Chromosome19 (Build37)
Map Location 55,516,891 - 55,647,209
singlet/doubletdoublet
Overlap geneVti1a, LOC100043479
Upstream geneLOC100043004, Gpam, Tectb, Gucy2g, Acsl5, Zdhhc6
Downstream geneTcf7l2, Ppnr, LOC100043484, Habp2, Nrap, Casp7, 9930023K05Rik, Dclre1a, Nhlrc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191M09.bB6Ng01-191M09.g
ACCGA015183GA015184
length754411
definitionB6Ng01-191M09.b B6Ng01-191M09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,516,891 - 55,517,644)(55,646,794 - 55,647,209)
sequence
gaattctctccccagcccagcatctgaaatcaatacattgcccagtgtgt
gtatgtgtccccgccacatcccatgtatgtgcctgcgagcgatgatcagg
cgactcagatattacccagtgtttgggaaaattcccgtatgccaggttac
tttaagacatattttttttttctgtagcacctattttattagctagatca
accattattcagtatggaaaggaactacatcaatgtgaatatagctacta
gataggtgtccattgagactgtctcacaggctggttaccacagccatatc
cagcaagcctttctgcagtgtacactcactcacagtgactgttacagtgg
tccctacaatcccaactactcctgagcgctaagacagggccattgggaat
tcaagattagcttacatgcacttgcatctgtgcgtatatatttgatttgg
ggctgtgctgtagatcacaccagggccttgtccatgccaggcaagcatga
gtttccttttataagcacttaacccacaccaggagaagctagggagataa
cttagggctgactgctgtatgcacaggctgctcttctagacaacccaggt
tcgatttctagtatccacatagtggcaaacatccatctataactatttca
aagaagtcagaagccctgttctggcctccgtgggccctacacaccatgta
gtgcacagacatacatgcaagttgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtg
tcctgaaccttgggttggggctggcaaagaacctttggtgaagggagcgg
tccccttagtttctctccaaccatgctgtaaagtggaattctcaactcat
cgctcccttgggctgttgctcgaggcgtgcatgtaaaagccagtctattc
cttgcaagtcaaagccccagaagctggtcagagtagaggctaagctgctt
ttggtgaggagaatgaatgtgttaccagtgcagttggtgcgctcgccctc
cccccccaccccacccccccgcctccgcccctctctctccactagctgga
aaggagtggttttgctcctgttttaatagttttactacacacttatgaat
ctacaagtgtgccatcccgtatgtgcgcaatgcttattggtcttgaattg
gcggtagcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_55516891_55517644
seq2: B6Ng01-191M09.b_47_800

seq1  GAATTCTCTCCCCAGCCCAGCATCTGAAATCAATACATTGCCCAGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCCCAGCCCAGCATCTGAAATCAATACATTGCCCAGTGTGT  50

seq1  GTATGTGTCCCCGCCACATCCCATGTATGTGCCTGCGAGCGATGATCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTCCCCGCCACATCCCATGTATGTGCCTGCGAGCGATGATCAGG  100

seq1  CGACTCAGATATTACCCAGTGTTTGGGAAAATTCCCGTATGCCAGGTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTCAGATATTACCCAGTGTTTGGGAAAATTCCCGTATGCCAGGTTAC  150

seq1  TTTAAGACATATTTTTTTTTTCTGTAGCACCTATTTTATTAGCTAGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGACATATTTTTTTTTTCTGTAGCACCTATTTTATTAGCTAGATCA  200

seq1  ACCATTATTCAGTATGGAAAGGAACTACATCAATGTGAATATAGCTACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTATTCAGTATGGAAAGGAACTACATCAATGTGAATATAGCTACTA  250

seq1  GATAGGTGTCCATTGAGACTGTCTCACAGGCTGGTTACCACAGCCATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGTGTCCATTGAGACTGTCTCACAGGCTGGTTACCACAGCCATATC  300

seq1  CAGCAAGCCTTTCTGCAGTGTACACTCACTCACAGTGACTGTTACAGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGCCTTTCTGCAGTGTACACTCACTCACAGTGACTGTTACAGTGG  350

seq1  TCCCTACAATCCCAACTACTCCTGAGCGCTAAGACAGGGCCATTGGGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACAATCCCAACTACTCCTGAGCGCTAAGACAGGGCCATTGGGAAT  400

seq1  TCAAGATTAGCTTACATGCACTTGCATCTGTGCGTATATATTTGATTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATTAGCTTACATGCACTTGCATCTGTGCGTATATATTTGATTTGG  450

seq1  GGCTGTGCTGTAGATCACACCAGGGCCTTGTCCATGCCAGGCAAGCATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGCTGTAGATCACACCAGGGCCTTGTCCATGCCAGGCAAGCATGA  500

seq1  GTTTCCTTTTATAAGCACTTAACCCACACCAGGAGAAGCTAGGGAGATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTTTTATAAGCACTTAACCCACACCAGGAGAAGCTAGGGAGATAA  550

seq1  CTTAGGGCTGACTGCTGTATGCACAGGCTGCTCTTCTAGACAACCCAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGGCTGACTGCTGTATGCACAGGCTGCTCTTCTAGACAACCCAGGT  600

seq1  TCGATTTCTAGTATCCACATAGTGGCAAACATCCATCTATAACTATTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATTTCTAGTATCCACATAGTGGCAAACATCCATCTATAACTATTTCA  650

seq1  AAGAAGTCAGAAGCCCTGTTCTGGCCTCCGTGGGCCCTACACACCATGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTCAGAAGCCCTGTTCTGGCCTCCGTGGGCCCTACACACCATGTA  700

seq1  GTGCACAGACATACATGCAAGTTGTGTGTGTGTGTGTGTGTGTGTGTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACAGACATACATGCAAGTTGTGTGTGTGTGTGTGTGTGTGTGTGTG  750

seq1  TGTG  754
      ||||
seq2  TGTG  754

seq1: chr19_55646794_55647209
seq2: B6Ng01-191M09.g_68_483 (reverse)

seq1  AAGCTACCGCCAATTCAAGACCACTCAGCGTTGCGCACATACGGGATGGC  50
      ||||||||||||||||||||||| | ||| ||||||||||||||||||||
seq2  AAGCTACCGCCAATTCAAGACCAATAAGCATTGCGCACATACGGGATGGC  50

seq1  ACACTTGTAGATTCATAAGTGTGTAGTAAAACTATTAAAACAGGAGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGTAGATTCATAAGTGTGTAGTAAAACTATTAAAACAGGAGCAAA  100

seq1  ACCACTCCTTTCCAGCTAGTGGAGAGAGAGGGGCGGAGGCGGGGGGGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCCTTTCCAGCTAGTGGAGAGAGAGGGGCGGAGGCGGGGGGGTGG  150

seq1  GGTGGGGGGGGAGGGCGAGCGCACCAACTGCACTGGTAACACATTCATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGGGGGAGGGCGAGCGCACCAACTGCACTGGTAACACATTCATTC  200

seq1  TCCTCACCAAAAGCAGCTTAGCCTCTACTCTGACCAGCTTCTGGGGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACCAAAAGCAGCTTAGCCTCTACTCTGACCAGCTTCTGGGGCTTT  250

seq1  GACTTGCAAGGAATAGACTGGCTTTTACATGCACGCCTCGAGCAACAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGCAAGGAATAGACTGGCTTTTACATGCACGCCTCGAGCAACAGCC  300

seq1  CAAGGGAGCGATGAGTTGAGAATTCCACTTTACAGCATGGTTGGAGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAGCGATGAGTTGAGAATTCCACTTTACAGCATGGTTGGAGAGAA  350

seq1  ACTAAGGGGACCGCTCCCTTCACCAAAGGTTCTTTGCCAGCCCCAACCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGGGACCGCTCCCTTCACCAAAGGTTCTTTGCCAGCCCCAACCCA  400

seq1  AGGTTCAGGAGAATTC  416
      ||||||||||||||||
seq2  AGGTTCAGGAGAATTC  416